RNA–Protein interactions for RNA: ENST00000487453.1

PRDM2-208, Transcript of PR/SET domain 2, humanhuman

TSL 3

Gene PRDM2, Length 646 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRDM2-208ENST00000487453 CCDC24Q8N4L8 307 aa16.19■□□□□ 0.18
PRDM2-208ENST00000487453 CWC25Q9NXE8 425 aaPredicted RBP16.19■□□□□ 0.18
PRDM2-208ENST00000487453 ABCC12Q96J65 1359 aa16.18■□□□□ 0.18
PRDM2-208ENST00000487453 NTSR2O95665 410 aa16.18■□□□□ 0.18
PRDM2-208ENST00000487453 IGKV5-2P06315 115 aa16.18■□□□□ 0.18
PRDM2-208ENST00000487453 ZKSCAN2Q63HK3 967 aa16.18■□□□□ 0.18
PRDM2-208ENST00000487453 NUTM1Q86Y26 1132 aa16.18■□□□□ 0.18
PRDM2-208ENST00000487453 LINS1Q8NG48 757 aa16.18■□□□□ 0.18
PRDM2-208ENST00000487453 UTP14AQ9BVJ6 771 aaKnown RBP16.18■□□□□ 0.18
PRDM2-208ENST00000487453 TRMT112Q9UI30 125 aaKnown RBP16.18■□□□□ 0.18
PRDM2-208ENST00000487453 DDX60Q8IY21 1712 aaKnown RBP16.18■□□□□ 0.18
PRDM2-208ENST00000487453 COL11A2P13942 1736 aaPredicted RBP16.17■□□□□ 0.18
PRDM2-208ENST00000487453 KIAA1551Q9HCM1 1747 aa16.17■□□□□ 0.18
PRDM2-208ENST00000487453 NEURL1BA8MQ27 555 aa16.17■□□□□ 0.18
PRDM2-208ENST00000487453 TRIM27P14373 513 aa16.17■□□□□ 0.18
PRDM2-208ENST00000487453 RTL5Q5HYW3 569 aaPredicted RBP16.17■□□□□ 0.18
PRDM2-208ENST00000487453 ATF7IPQ6VMQ6 1270 aa16.17■□□□□ 0.18
PRDM2-208ENST00000487453 CCDC191Q8NCU4 936 aa16.17■□□□□ 0.18
PRDM2-208ENST00000487453 ARHGAP45Q92619 1136 aa16.17■□□□□ 0.18
PRDM2-208ENST00000487453 FHDC1Q9C0D6 1143 aaPredicted RBP16.17■□□□□ 0.18
PRDM2-208ENST00000487453 SRCIN1Q9C0H9 1055 aa16.17■□□□□ 0.18
PRDM2-208ENST00000487453 RNF123Q5XPI4 1314 aa16.17■□□□□ 0.18
PRDM2-208ENST00000487453 ERFEQ4G0M1 354 aa16.16■□□□□ 0.18
PRDM2-208ENST00000487453 BEND3Q5T5X7 828 aa16.16■□□□□ 0.18
PRDM2-208ENST00000487453 CLUAP1Q96AJ1 413 aa16.16■□□□□ 0.18
PRDM2-208ENST00000487453 TNNQ9UQP3 1299 aa16.16■□□□□ 0.18
PRDM2-208ENST00000487453 SH3TC1Q8TE82 1336 aa16.16■□□□□ 0.18
PRDM2-208ENST00000487453 DLEC1Q9Y238 1755 aa16.15■□□□□ 0.18
PRDM2-208ENST00000487453 TRIM28Q13263 835 aaKnown RBP16.15■□□□□ 0.18
PRDM2-208ENST00000487453 FTSJ3Q8IY81 847 aaKnown RBP16.15■□□□□ 0.18
PRDM2-208ENST00000487453 FAM89AQ96GI7 184 aa16.15■□□□□ 0.18
PRDM2-208ENST00000487453 ABCC4O15439 1325 aa16.15■□□□□ 0.18
PRDM2-208ENST00000487453 RIC1Q4ADV7 1423 aa16.14■□□□□ 0.17
PRDM2-208ENST00000487453 GCKRQ14397 625 aa16.14■□□□□ 0.17
PRDM2-208ENST00000487453 GOLGA6L2Q8N9W4 650 aaPredicted RBP16.14■□□□□ 0.17
PRDM2-208ENST00000487453 CD2APQ9Y5K6 639 aa16.14■□□□□ 0.17
PRDM2-208ENST00000487453 ALDH1L1O75891 902 aa16.13■□□□□ 0.17
PRDM2-208ENST00000487453 CCT4P50991 539 aaKnown RBP16.13■□□□□ 0.17
PRDM2-208ENST00000487453 UBE3BQ7Z3V4 1068 aa16.13■□□□□ 0.17
PRDM2-208ENST00000487453 ZBTB38Q8NAP3 1195 aaPredicted RBP16.13■□□□□ 0.17
PRDM2-208ENST00000487453 JARID2Q92833 1246 aaPredicted RBP16.13■□□□□ 0.17
PRDM2-208ENST00000487453 CACNA1SQ13698 1873 aa16.13■□□□□ 0.17
PRDM2-208ENST00000487453 PLIN1O60240 522 aa16.12■□□□□ 0.17
PRDM2-208ENST00000487453 PCCAP05165 728 aaPredicted RBP16.12■□□□□ 0.17
PRDM2-208ENST00000487453 PDE6BP35913 854 aa16.12■□□□□ 0.17
PRDM2-208ENST00000487453 DZIP1LQ8IYY4 767 aaKnown RBP16.12■□□□□ 0.17
PRDM2-208ENST00000487453 SYNE4Q8N205 404 aa16.12■□□□□ 0.17
PRDM2-208ENST00000487453 NLGN2Q8NFZ4 835 aa16.12■□□□□ 0.17
PRDM2-208ENST00000487453 BRIP1Q9BX63 1249 aa16.12■□□□□ 0.17
PRDM2-208ENST00000487453 C9orf78Q9NZ63 289 aaPredicted RBP16.12■□□□□ 0.17
PRDM2-208ENST00000487453 GRM8O00222 908 aa16.11■□□□□ 0.17
PRDM2-208ENST00000487453 IRS4O14654 1257 aaPredicted RBP16.11■□□□□ 0.17
PRDM2-208ENST00000487453 HCLS1P14317 486 aaPredicted RBP16.11■□□□□ 0.17
PRDM2-208ENST00000487453 MYH3P11055 1940 aa16.11■□□□□ 0.17
PRDM2-208ENST00000487453 CHRNA5P30532 468 aa16.1■□□□□ 0.17
PRDM2-208ENST00000487453 C2CD5Q86YS7 1000 aa16.1■□□□□ 0.17
PRDM2-208ENST00000487453 TMEM57Q8N5G2 664 aa16.1■□□□□ 0.17
PRDM2-208ENST00000487453 SYT17Q9BSW7 474 aa16.1■□□□□ 0.17
PRDM2-208ENST00000487453 CDHR2Q9BYE9 1310 aa16.1■□□□□ 0.17
PRDM2-208ENST00000487453 BRCA1P38398 1863 aaKnown RBP16.1■□□□□ 0.17
PRDM2-208ENST00000487453 H0YIN7 160 aa16.09■□□□□ 0.17
PRDM2-208ENST00000487453 MS4A1P11836 297 aa16.09■□□□□ 0.17
PRDM2-208ENST00000487453 HSP90B1P14625 803 aaKnown RBP16.09■□□□□ 0.17
PRDM2-208ENST00000487453 RRP1P56182 461 aaKnown RBP16.09■□□□□ 0.17
PRDM2-208ENST00000487453 TGFB2P61812 414 aa16.09■□□□□ 0.17
PRDM2-208ENST00000487453 INTS3Q68E01 1043 aaKnown RBP16.09■□□□□ 0.17
PRDM2-208ENST00000487453 ITPRIPQ8IWB1 547 aa16.09■□□□□ 0.17
PRDM2-208ENST00000487453 NLRP3Q96P20 1036 aa16.09■□□□□ 0.17
PRDM2-208ENST00000487453 WWC3Q9ULE0 1092 aa16.09■□□□□ 0.17
PRDM2-208ENST00000487453 A0A0G2JLW4 131 aa16.08■□□□□ 0.16
PRDM2-208ENST00000487453 H7C1W4 665 aa16.08■□□□□ 0.16
PRDM2-208ENST00000487453 RLBP1P12271 317 aa16.08■□□□□ 0.16
PRDM2-208ENST00000487453 DPEP1P16444 411 aa16.08■□□□□ 0.16
PRDM2-208ENST00000487453 PANK1Q8TE04 598 aa16.08■□□□□ 0.16
PRDM2-208ENST00000487453 RPGRQ92834 1020 aaKnown RBP16.08■□□□□ 0.16
PRDM2-208ENST00000487453 PDE8AO60658 829 aa16.07■□□□□ 0.16
PRDM2-208ENST00000487453 NBPF7P0C2Y1 421 aaPredicted RBP16.07■□□□□ 0.16
PRDM2-208ENST00000487453 SLC10A5Q5PT55 438 aa16.07■□□□□ 0.16
PRDM2-208ENST00000487453 C3orf67Q6ZVT6 689 aa16.07■□□□□ 0.16
PRDM2-208ENST00000487453 UBTFL1P0CB47 393 aaPredicted RBP16.06■□□□□ 0.16
PRDM2-208ENST00000487453 CTSWP56202 376 aa16.06■□□□□ 0.16
PRDM2-208ENST00000487453 ZNF622Q969S3 477 aaKnown RBP eCLIP16.06■□□□□ 0.162e-6■□□□□ 10.9
PRDM2-208ENST00000487453 PDZRN3Q9UPQ7 1066 aa16.06■□□□□ 0.16
PRDM2-208ENST00000487453 SPEF2Q9C093 1822 aa16.05■□□□□ 0.16
PRDM2-208ENST00000487453 UTYO14607 1347 aa16.05■□□□□ 0.16
PRDM2-208ENST00000487453 SRGNP10124 158 aa16.05■□□□□ 0.16
PRDM2-208ENST00000487453 CASP7P55210 303 aa16.05■□□□□ 0.16
PRDM2-208ENST00000487453 CRY2Q49AN0 593 aa16.05■□□□□ 0.16
PRDM2-208ENST00000487453 PELP1Q8IZL8 1130 aaKnown RBP16.05■□□□□ 0.16
PRDM2-208ENST00000487453 CCDC85AQ96PX6 553 aaPredicted RBP16.05■□□□□ 0.16
PRDM2-208ENST00000487453 MEIS3Q99687 375 aa16.05■□□□□ 0.16
PRDM2-208ENST00000487453 USP44Q9H0E7 712 aa16.05■□□□□ 0.16
PRDM2-208ENST00000487453 NPR1P16066 1061 aa16.04■□□□□ 0.16
PRDM2-208ENST00000487453 C20orf194Q5TEA3 1177 aa16.04■□□□□ 0.16
PRDM2-208ENST00000487453 MASTLQ96GX5 879 aa16.04■□□□□ 0.16
PRDM2-208ENST00000487453 SUCLG2Q96I99 432 aa16.04■□□□□ 0.16
PRDM2-208ENST00000487453 COG6Q9Y2V7 657 aa16.04■□□□□ 0.16
PRDM2-208ENST00000487453 KLRG2A4D1S0 409 aaPredicted RBP16.03■□□□□ 0.16
PRDM2-208ENST00000487453 GNAI3P08754 354 aa16.03■□□□□ 0.16
PRDM2-208ENST00000487453 PDE3AQ14432 1141 aa16.03■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 15 ms