RNA–Protein interactions for RNA: ENST00000486935.2

SEMA4D-219, Transcript of semaphorin 4D, humanhuman

TSL 2

Gene SEMA4D, Length 969 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA4D-219ENST00000486935 SLX4Q8IY92 1834 aa19.97■□□□□ 0.79
SEMA4D-219ENST00000486935 NTSR2O95665 410 aa19.96■□□□□ 0.79
SEMA4D-219ENST00000486935 FKBP4Q02790 459 aaKnown RBP eCLIP19.96■□□□□ 0.79
SEMA4D-219ENST00000486935 CCDC27Q2M243 656 aa19.96■□□□□ 0.79
SEMA4D-219ENST00000486935 WWC1Q8IX03 1113 aa19.96■□□□□ 0.79
SEMA4D-219ENST00000486935 UTP14AQ9BVJ6 771 aaKnown RBP19.96■□□□□ 0.79
SEMA4D-219ENST00000486935 NCBP3Q53F19 620 aaKnown RBP19.95■□□□□ 0.78
SEMA4D-219ENST00000486935 HDGFL1Q5TGJ6 251 aa19.95■□□□□ 0.78
SEMA4D-219ENST00000486935 ZNF277Q9NRM2 450 aaPredicted RBP19.95■□□□□ 0.78
SEMA4D-219ENST00000486935 MBIPQ9NS73 344 aa19.95■□□□□ 0.78
SEMA4D-219ENST00000486935 CHPF2Q9P2E5 772 aa19.95■□□□□ 0.78
SEMA4D-219ENST00000486935 POTECB2RU33 542 aa19.94■□□□□ 0.78
SEMA4D-219ENST00000486935 HOXA10P31260 410 aaPredicted RBP19.94■□□□□ 0.78
SEMA4D-219ENST00000486935 C3orf67Q6ZVT6 689 aa19.94■□□□□ 0.78
SEMA4D-219ENST00000486935 SMC1BQ8NDV3 1235 aa19.94■□□□□ 0.78
SEMA4D-219ENST00000486935 RBM17Q96I25 401 aaKnown RBP19.94■□□□□ 0.78
SEMA4D-219ENST00000486935 ZNF521Q96K83 1311 aa19.94■□□□□ 0.78
SEMA4D-219ENST00000486935 IBTKQ9P2D0 1353 aaPredicted RBP19.94■□□□□ 0.78
SEMA4D-219ENST00000486935 DDNO94850 711 aaPredicted RBP19.93■□□□□ 0.78
SEMA4D-219ENST00000486935 TCIRG1Q13488 830 aa19.93■□□□□ 0.78
SEMA4D-219ENST00000486935 HSP90AB3PQ58FF7 597 aa19.93■□□□□ 0.78
SEMA4D-219ENST00000486935 DUSP27Q5VZP5 1158 aa19.93■□□□□ 0.78
SEMA4D-219ENST00000486935 SYNE4Q8N205 404 aa19.93■□□□□ 0.78
SEMA4D-219ENST00000486935 NLRP3Q96P20 1036 aa19.93■□□□□ 0.78
SEMA4D-219ENST00000486935 TCERG1O14776 1098 aaKnown RBP19.92■□□□□ 0.78
SEMA4D-219ENST00000486935 HOXB7P09629 217 aa19.92■□□□□ 0.78
SEMA4D-219ENST00000486935 SLC10A5Q5PT55 438 aa19.92■□□□□ 0.78
SEMA4D-219ENST00000486935 DBF4Q9UBU7 674 aaPredicted RBP19.92■□□□□ 0.78
SEMA4D-219ENST00000486935 ZNF853P0CG23 659 aa19.91■□□□□ 0.78
SEMA4D-219ENST00000486935 CALD1Q05682 793 aaKnown RBP19.91■□□□□ 0.78
SEMA4D-219ENST00000486935 NLRP10Q86W26 655 aa19.91■□□□□ 0.78
SEMA4D-219ENST00000486935 ZNF428Q96B54 188 aa19.91■□□□□ 0.78
SEMA4D-219ENST00000486935 CRAMP1Q96RY5 1269 aa19.91■□□□□ 0.78
SEMA4D-219ENST00000486935 NUP98P52948 1817 aa19.9■□□□□ 0.78
SEMA4D-219ENST00000486935 GNAI1P63096 354 aa19.9■□□□□ 0.78
SEMA4D-219ENST00000486935 HTRA3P83110 453 aa19.9■□□□□ 0.78
SEMA4D-219ENST00000486935 GOLGA2Q08379 1002 aa19.9■□□□□ 0.78
SEMA4D-219ENST00000486935 CC2D2BQ6DHV5 1058 aa19.9■□□□□ 0.78
SEMA4D-219ENST00000486935 ANKRD13DQ6ZTN6 518 aa19.9■□□□□ 0.78
SEMA4D-219ENST00000486935 DNAJC5GQ8N7S2 189 aa19.9■□□□□ 0.78
SEMA4D-219ENST00000486935 IFT57Q9NWB7 429 aa19.9■□□□□ 0.78
SEMA4D-219ENST00000486935 TRMT112Q9UI30 125 aaKnown RBP19.9■□□□□ 0.78
SEMA4D-219ENST00000486935 FER1L6Q2WGJ9 1857 aa19.9■□□□□ 0.78
SEMA4D-219ENST00000486935 ELL2O00472 640 aaPredicted RBP19.89■□□□□ 0.77
SEMA4D-219ENST00000486935 PPEF1O14829 653 aaPredicted RBP19.89■□□□□ 0.77
SEMA4D-219ENST00000486935 HCLS1P14317 486 aaPredicted RBP19.89■□□□□ 0.77
SEMA4D-219ENST00000486935 IARSP41252 1262 aaKnown RBP19.89■□□□□ 0.77
SEMA4D-219ENST00000486935 RIC1Q4ADV7 1423 aa19.89■□□□□ 0.77
SEMA4D-219ENST00000486935 WDR63Q8IWG1 891 aa19.89■□□□□ 0.77
SEMA4D-219ENST00000486935 CDCA7LQ96GN5 454 aa19.89■□□□□ 0.77
SEMA4D-219ENST00000486935 TNRC6CQ9HCJ0 1690 aaKnown RBP19.88■□□□□ 0.77
SEMA4D-219ENST00000486935 PLBD2Q8NHP8 589 aa19.88■□□□□ 0.77
SEMA4D-219ENST00000486935 HYPKQ9NX55 129 aa19.88■□□□□ 0.77
SEMA4D-219ENST00000486935 TIAM2Q8IVF5 1701 aa19.88■□□□□ 0.77
SEMA4D-219ENST00000486935 SLC51AQ86UW1 340 aa19.87■□□□□ 0.77
SEMA4D-219ENST00000486935 PSMD1Q99460 953 aa19.87■□□□□ 0.77
SEMA4D-219ENST00000486935 CCDC88AQ3V6T2 1871 aa19.87■□□□□ 0.77
SEMA4D-219ENST00000486935 CACNA1SQ13698 1873 aa19.86■□□□□ 0.77
SEMA4D-219ENST00000486935 RNF123Q5XPI4 1314 aa19.86■□□□□ 0.77
SEMA4D-219ENST00000486935 SH3TC1Q8TE82 1336 aa19.86■□□□□ 0.77
SEMA4D-219ENST00000486935 ATP5J2-PTCD1G3V325 749 aa19.86■□□□□ 0.77
SEMA4D-219ENST00000486935 TMX4Q9H1E5 349 aaPredicted RBP19.86■□□□□ 0.77
SEMA4D-219ENST00000486935 ARFGEF2Q9Y6D5 1785 aa19.85■□□□□ 0.77
SEMA4D-219ENST00000486935 IL16Q14005 1332 aa19.85■□□□□ 0.77
SEMA4D-219ENST00000486935 ZNF541Q9H0D2 1346 aa19.85■□□□□ 0.77
SEMA4D-219ENST00000486935 GRIPAP1Q4V328 841 aa19.85■□□□□ 0.77
SEMA4D-219ENST00000486935 C8orf58Q8NAV2 365 aa19.85■□□□□ 0.77
SEMA4D-219ENST00000486935 JDP2Q8WYK2 163 aa19.85■□□□□ 0.77
SEMA4D-219ENST00000486935 SPINK5Q9NQ38 1064 aaPredicted RBP19.85■□□□□ 0.77
SEMA4D-219ENST00000486935 IQCA1LA6NCM1 817 aa19.84■□□□□ 0.77
SEMA4D-219ENST00000486935 FZD9O00144 591 aa19.84■□□□□ 0.77
SEMA4D-219ENST00000486935 ATP6V0A2Q9Y487 856 aa19.84■□□□□ 0.77
SEMA4D-219ENST00000486935 ABCC4O15439 1325 aa19.83■□□□□ 0.77
SEMA4D-219ENST00000486935 E9PSI1 815 aa19.83■□□□□ 0.77
SEMA4D-219ENST00000486935 BBOX1O75936 387 aa19.83■□□□□ 0.77
SEMA4D-219ENST00000486935 SLFN5Q08AF3 891 aa19.83■□□□□ 0.77
SEMA4D-219ENST00000486935 RIC3Q7Z5B4 369 aa19.83■□□□□ 0.77
SEMA4D-219ENST00000486935 L3MBTL3Q96JM7 780 aaPredicted RBP19.83■□□□□ 0.77
SEMA4D-219ENST00000486935 ISCA1Q9BUE6 129 aa19.83■□□□□ 0.77
SEMA4D-219ENST00000486935 WDR90Q96KV7 1748 aa19.82■□□□□ 0.76
SEMA4D-219ENST00000486935 POTEIP0CG38 1075 aa19.82■□□□□ 0.76
SEMA4D-219ENST00000486935 POTEJP0CG39 1038 aa19.82■□□□□ 0.76
SEMA4D-219ENST00000486935 CHADLQ6NUI6 762 aa19.82■□□□□ 0.76
SEMA4D-219ENST00000486935 DDX46Q7L014 1031 aaKnown RBP19.82■□□□□ 0.76
SEMA4D-219ENST00000486935 LARGE2Q8N3Y3 721 aa19.82■□□□□ 0.76
SEMA4D-219ENST00000486935 FAM89AQ96GI7 184 aa19.82■□□□□ 0.76
SEMA4D-219ENST00000486935 TAF1DQ9H5J8 278 aaPredicted RBP19.82■□□□□ 0.76
SEMA4D-219ENST00000486935 PHAXQ9H814 394 aaKnown RBP19.82■□□□□ 0.76
SEMA4D-219ENST00000486935 RTL5Q5HYW3 569 aaPredicted RBP19.81■□□□□ 0.76
SEMA4D-219ENST00000486935 TSR2Q969E8 191 aaKnown RBP19.81■□□□□ 0.76
SEMA4D-219ENST00000486935 MYH16Q9H6N6 1097 aa19.81■□□□□ 0.76
SEMA4D-219ENST00000486935 SNED1Q8TER0 1413 aa19.81■□□□□ 0.76
SEMA4D-219ENST00000486935 FANCIQ9NVI1 1328 aa19.8■□□□□ 0.76
SEMA4D-219ENST00000486935 EIF6P56537 245 aaKnown RBP19.8■□□□□ 0.76
SEMA4D-219ENST00000486935 SP8Q8IXZ3 490 aa19.8■□□□□ 0.76
SEMA4D-219ENST00000486935 TSPYL6Q8N831 410 aa19.8■□□□□ 0.76
SEMA4D-219ENST00000486935 KLRG1Q96E93 195 aa19.8■□□□□ 0.76
SEMA4D-219ENST00000486935 HACL1Q9UJ83 578 aa19.8■□□□□ 0.76
SEMA4D-219ENST00000486935 GJA3Q9Y6H8 435 aa19.8■□□□□ 0.76
SEMA4D-219ENST00000486935 DICER1Q9UPY3 1922 aaKnown RBP19.8■□□□□ 0.76
Retrieved 100 of 20,778 RNA–protein pairs in 12.5 ms