RNA–Protein interactions for RNA: ENST00000486466.1

CBWD5-228, Transcript of COBW domain containing 5, humanhuman

TSL 2

Gene CBWD5, Length 585 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBWD5-228ENST00000486466 KCNA3P22001 575 aa13.13□□□□□ -0.31
CBWD5-228ENST00000486466 TGFB2P61812 414 aa13.13□□□□□ -0.31
CBWD5-228ENST00000486466 NYAP1Q6ZVC0 841 aa13.13□□□□□ -0.31
CBWD5-228ENST00000486466 LRCH3Q96II8 777 aa13.13□□□□□ -0.31
CBWD5-228ENST00000486466 CDKN2AIPQ9NXV6 580 aaPredicted RBP13.13□□□□□ -0.31
CBWD5-228ENST00000486466 FAM198AQ9UFP1 575 aa13.13□□□□□ -0.31
CBWD5-228ENST00000486466 AFDNP55196 1824 aaKnown RBP13.12□□□□□ -0.31
CBWD5-228ENST00000486466 A0A0G2JLW4 131 aa13.12□□□□□ -0.31
CBWD5-228ENST00000486466 RPS6KA4O75676 772 aa13.12□□□□□ -0.31
CBWD5-228ENST00000486466 TNNT2P45379 298 aaPredicted RBP13.12□□□□□ -0.31
CBWD5-228ENST00000486466 AEBP1Q8IUX7 1158 aa13.12□□□□□ -0.31
CBWD5-228ENST00000486466 DCAF5Q96JK2 942 aa13.12□□□□□ -0.31
CBWD5-228ENST00000486466 TIMELESSQ9UNS1 1208 aa13.12□□□□□ -0.31
CBWD5-228ENST00000486466 RTCBQ9Y3I0 505 aaKnown RBP13.12□□□□□ -0.31
CBWD5-228ENST00000486466 NRXN2Q9P2S2 1712 aa13.11□□□□□ -0.31
CBWD5-228ENST00000486466 TRIM26Q12899 539 aaPredicted RBP13.11□□□□□ -0.31
CBWD5-228ENST00000486466 TRAPPC3LQ5T215 181 aa13.11□□□□□ -0.31
CBWD5-228ENST00000486466 NLGN1Q8N2Q7 840 aa13.11□□□□□ -0.31
CBWD5-228ENST00000486466 WBP1LQ9NX94 342 aa13.11□□□□□ -0.31
CBWD5-228ENST00000486466 DLEC1Q9Y238 1755 aa13.1□□□□□ -0.31
CBWD5-228ENST00000486466 DPEP1P16444 411 aa13.1□□□□□ -0.31
CBWD5-228ENST00000486466 TSR3Q9UJK0 312 aaKnown RBP13.1□□□□□ -0.31
CBWD5-228ENST00000486466 WDR90Q96KV7 1748 aa13.1□□□□□ -0.31
CBWD5-228ENST00000486466 MRC1P22897 1456 aa13.1□□□□□ -0.31
CBWD5-228ENST00000486466 SMAPO00193 183 aa13.09□□□□□ -0.31
CBWD5-228ENST00000486466 HSP90AB1P08238 724 aaKnown RBP13.09□□□□□ -0.31
CBWD5-228ENST00000486466 ZNF530Q6P9A1 599 aaPredicted RBP13.09□□□□□ -0.31
CBWD5-228ENST00000486466 TATDN2Q93075 761 aa13.09□□□□□ -0.31
CBWD5-228ENST00000486466 PANK3Q9H999 370 aa13.09□□□□□ -0.31
CBWD5-228ENST00000486466 RBM27Q9P2N5 1060 aaKnown RBP13.09□□□□□ -0.31
CBWD5-228ENST00000486466 BCS1LQ9Y276 419 aa13.09□□□□□ -0.31
CBWD5-228ENST00000486466 UBR2Q8IWV8 1755 aa13.09□□□□□ -0.31
CBWD5-228ENST00000486466 NBPF26B4DH59 902 aa13.08□□□□□ -0.32
CBWD5-228ENST00000486466 CRKLP46109 303 aaKnown RBP13.08□□□□□ -0.32
CBWD5-228ENST00000486466 DDR1Q08345 913 aa13.08□□□□□ -0.32
CBWD5-228ENST00000486466 PLEKHO1Q53GL0 409 aaPredicted RBP13.08□□□□□ -0.32
CBWD5-228ENST00000486466 DNAJC5GQ8N7S2 189 aa13.08□□□□□ -0.32
CBWD5-228ENST00000486466 NMRK2Q9NPI5 230 aa13.08□□□□□ -0.32
CBWD5-228ENST00000486466 SRP68Q9UHB9 627 aaKnown RBP13.08□□□□□ -0.32
CBWD5-228ENST00000486466 HPS5Q9UPZ3 1129 aa13.08□□□□□ -0.32
CBWD5-228ENST00000486466 PCNTO95613 3336 aa13.08□□□□□ -0.32
CBWD5-228ENST00000486466 USP42Q9H9J4 1324 aaKnown RBP13.08□□□□□ -0.32
CBWD5-228ENST00000486466 HSPA5P11021 654 aaKnown RBP13.07□□□□□ -0.32
CBWD5-228ENST00000486466 MLLT3P42568 568 aaPredicted RBP13.07□□□□□ -0.32
CBWD5-228ENST00000486466 CABP4P57796 275 aa13.07□□□□□ -0.32
CBWD5-228ENST00000486466 AMOTQ4VCS5 1084 aa13.07□□□□□ -0.32
CBWD5-228ENST00000486466 INTS5Q6P9B9 1019 aaKnown RBP13.07□□□□□ -0.32
CBWD5-228ENST00000486466 NPDC1Q9NQX5 325 aaPredicted RBP13.07□□□□□ -0.32
CBWD5-228ENST00000486466 CCDC87Q9NVE4 849 aa13.07□□□□□ -0.32
CBWD5-228ENST00000486466 PNMA3Q9UL41 463 aa13.07□□□□□ -0.32
CBWD5-228ENST00000486466 CCDC88AQ3V6T2 1871 aa13.07□□□□□ -0.32
CBWD5-228ENST00000486466 KCPQ6ZWJ8 1503 aa13.07□□□□□ -0.32
CBWD5-228ENST00000486466 CLSPNQ9HAW4 1339 aa13.07□□□□□ -0.32
CBWD5-228ENST00000486466 TNRC6CQ9HCJ0 1690 aaKnown RBP13.06□□□□□ -0.32
CBWD5-228ENST00000486466 C3orf80F5H4A9 247 aa13.06□□□□□ -0.32
CBWD5-228ENST00000486466 PTCD1O75127 700 aaKnown RBP13.06□□□□□ -0.32
CBWD5-228ENST00000486466 ITGBL1O95965 494 aaPredicted RBP13.06□□□□□ -0.32
CBWD5-228ENST00000486466 IL13P35225 146 aa13.06□□□□□ -0.32
CBWD5-228ENST00000486466 RFC4P35249 363 aa13.06□□□□□ -0.32
CBWD5-228ENST00000486466 PLCB2Q00722 1185 aa13.06□□□□□ -0.32
CBWD5-228ENST00000486466 NFATC2IPQ8NCF5 419 aa13.06□□□□□ -0.32
CBWD5-228ENST00000486466 TOMM70O94826 608 aa13.05□□□□□ -0.32
CBWD5-228ENST00000486466 FCHSD2O94868 740 aa13.05□□□□□ -0.32
CBWD5-228ENST00000486466 TM4SF1P30408 202 aa13.05□□□□□ -0.32
CBWD5-228ENST00000486466 MTHFSP49914 203 aa13.05□□□□□ -0.32
CBWD5-228ENST00000486466 ARHGAP27Q6ZUM4 889 aa13.05□□□□□ -0.32
CBWD5-228ENST00000486466 POLR3GLQ9BT43 218 aa13.05□□□□□ -0.32
CBWD5-228ENST00000486466 PARP3Q9Y6F1 533 aa13.05□□□□□ -0.32
CBWD5-228ENST00000486466 POLRMTO00411 1230 aaKnown RBP13.04□□□□□ -0.32
CBWD5-228ENST00000486466 C9orf131Q5VYM1 1079 aa13.04□□□□□ -0.32
CBWD5-228ENST00000486466 SULT6B1Q6IMI4 303 aa13.04□□□□□ -0.32
CBWD5-228ENST00000486466 SAMD7Q7Z3H4 446 aa13.04□□□□□ -0.32
CBWD5-228ENST00000486466 ANKRD31Q8N7Z5 1873 aa13.04□□□□□ -0.32
CBWD5-228ENST00000486466 SIPA1L3O60292 1781 aaPredicted RBP13.03□□□□□ -0.32
CBWD5-228ENST00000486466 APLP1P51693 650 aa13.03□□□□□ -0.32
CBWD5-228ENST00000486466 EIF4G2P78344 907 aaKnown RBP eCLIP13.03□□□□□ -0.32
CBWD5-228ENST00000486466 NUDT18Q6ZVK8 323 aa13.03□□□□□ -0.32
CBWD5-228ENST00000486466 TTC13Q8NBP0 860 aa13.03□□□□□ -0.32
CBWD5-228ENST00000486466 SOS1Q07889 1333 aaPredicted RBP13.03□□□□□ -0.32
CBWD5-228ENST00000486466 CHRNA5P30532 468 aa13.02□□□□□ -0.33
CBWD5-228ENST00000486466 PPP4CP60510 307 aa13.02□□□□□ -0.33
CBWD5-228ENST00000486466 C1orf141Q5JVX7 400 aa13.02□□□□□ -0.33
CBWD5-228ENST00000486466 DNAJC10Q8IXB1 793 aa13.02□□□□□ -0.33
CBWD5-228ENST00000486466 LGR6Q9HBX8 967 aa13.02□□□□□ -0.33
CBWD5-228ENST00000486466 PIM2Q9P1W9 311 aa13.02□□□□□ -0.33
CBWD5-228ENST00000486466 TIAM2Q8IVF5 1701 aa13.02□□□□□ -0.33
CBWD5-228ENST00000486466 RGS20O76081 388 aa13.01□□□□□ -0.33
CBWD5-228ENST00000486466 CYP19A1P11511 503 aaPredicted RBP13.01□□□□□ -0.33
CBWD5-228ENST00000486466 PRELPP51888 382 aa13.01□□□□□ -0.33
CBWD5-228ENST00000486466 PADI6Q6TGC4 694 aa13.01□□□□□ -0.33
CBWD5-228ENST00000486466 MORC1Q86VD1 984 aa13.01□□□□□ -0.33
CBWD5-228ENST00000486466 RBM46Q8TBY0 533 aaKnown RBP13.01□□□□□ -0.33
CBWD5-228ENST00000486466 SLC52A2Q9HAB3 445 aa13.01□□□□□ -0.33
CBWD5-228ENST00000486466 DICER1Q9UPY3 1922 aaKnown RBP13□□□□□ -0.33
CBWD5-228ENST00000486466 COL11A2P13942 1736 aaPredicted RBP13□□□□□ -0.33
CBWD5-228ENST00000486466 SCN7AQ01118 1682 aa13□□□□□ -0.33
CBWD5-228ENST00000486466 AKAP4Q5JQC9 854 aa13□□□□□ -0.33
CBWD5-228ENST00000486466 COL3A1P02461 1466 aaPredicted RBP12.99□□□□□ -0.33
CBWD5-228ENST00000486466 RNMTO43148 476 aaKnown RBP12.99□□□□□ -0.33
CBWD5-228ENST00000486466 HTRA3P83110 453 aa12.99□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 38.6 ms