RNA–Protein interactions for RNA: ENST00000485737.1

SMARCC1-206, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin subfamily c member 1, humanhuman

TSL 4

Gene SMARCC1, Length 631 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCC1-206ENST00000485737 PTK2Q05397 1052 aa5.87□□□□□ -1.47
SMARCC1-206ENST00000485737 ERFEQ4G0M1 354 aa5.87□□□□□ -1.47
SMARCC1-206ENST00000485737 CFAP70Q5T0N1 1121 aa5.87□□□□□ -1.47
SMARCC1-206ENST00000485737 MORC1Q86VD1 984 aa5.87□□□□□ -1.47
SMARCC1-206ENST00000485737 HSCBQ8IWL3 235 aa5.87□□□□□ -1.47
SMARCC1-206ENST00000485737 DZIP1LQ8IYY4 767 aaKnown RBP5.87□□□□□ -1.47
SMARCC1-206ENST00000485737 SLC10A4Q96EP9 437 aa5.87□□□□□ -1.47
SMARCC1-206ENST00000485737 CFAP53Q96M91 514 aa5.87□□□□□ -1.47
SMARCC1-206ENST00000485737 CDK15Q96Q40 435 aa5.87□□□□□ -1.47
SMARCC1-206ENST00000485737 GRPEL1Q9HAV7 217 aa5.87□□□□□ -1.47
SMARCC1-206ENST00000485737 ADGRF5Q8IZF2 1346 aa5.87□□□□□ -1.47
SMARCC1-206ENST00000485737 PIK3R4Q99570 1358 aa5.87□□□□□ -1.47
SMARCC1-206ENST00000485737 CD109Q6YHK3 1445 aa5.87□□□□□ -1.47
SMARCC1-206ENST00000485737 FRMPD1Q5SYB0 1578 aa5.87□□□□□ -1.47
SMARCC1-206ENST00000485737 CLTCQ00610 1675 aaKnown RBP5.87□□□□□ -1.47
SMARCC1-206ENST00000485737 PTCH1Q13635 1447 aa5.86□□□□□ -1.47
SMARCC1-206ENST00000485737 ASXL2Q76L83 1435 aa5.86□□□□□ -1.47
SMARCC1-206ENST00000485737 ZC3H4Q9UPT8 1303 aaKnown RBP5.86□□□□□ -1.47
SMARCC1-206ENST00000485737 ZIC2O95409 532 aaPredicted RBP5.86□□□□□ -1.47
SMARCC1-206ENST00000485737 TPM2P07951 284 aa5.86□□□□□ -1.47
SMARCC1-206ENST00000485737 NR5A1Q13285 461 aa5.86□□□□□ -1.47
SMARCC1-206ENST00000485737 RAB3GAP1Q15042 981 aa5.86□□□□□ -1.47
SMARCC1-206ENST00000485737 SKOR2Q2VWA4 1001 aaPredicted RBP5.86□□□□□ -1.47
SMARCC1-206ENST00000485737 CLEC17AQ6ZS10 378 aa5.86□□□□□ -1.47
SMARCC1-206ENST00000485737 C1QTNF2Q9BXJ5 285 aa5.86□□□□□ -1.47
SMARCC1-206ENST00000485737 PANK2Q9BZ23 570 aa5.86□□□□□ -1.47
SMARCC1-206ENST00000485737 DDX19BQ9UMR2 479 aa5.86□□□□□ -1.47
SMARCC1-206ENST00000485737 TNNQ9UQP3 1299 aa5.86□□□□□ -1.47
SMARCC1-206ENST00000485737 ABCC3O15438 1527 aa5.85□□□□□ -1.47
SMARCC1-206ENST00000485737 RPGRIP1LQ68CZ1 1315 aa5.85□□□□□ -1.47
SMARCC1-206ENST00000485737 ESPNB1AK53 854 aa5.85□□□□□ -1.47
SMARCC1-206ENST00000485737 NR3C2P08235 984 aa5.85□□□□□ -1.47
SMARCC1-206ENST00000485737 TRIM27P14373 513 aa5.85□□□□□ -1.47
SMARCC1-206ENST00000485737 TIMP2P16035 220 aa5.85□□□□□ -1.47
SMARCC1-206ENST00000485737 GRM5P41594 1212 aa5.85□□□□□ -1.47
SMARCC1-206ENST00000485737 FTSJ3Q8IY81 847 aaKnown RBP5.85□□□□□ -1.47
SMARCC1-206ENST00000485737 GBP4Q96PP9 640 aa5.85□□□□□ -1.47
SMARCC1-206ENST00000485737 ZFAND3Q9H8U3 227 aa5.85□□□□□ -1.47
SMARCC1-206ENST00000485737 C14orf93Q9H972 538 aaKnown RBP5.85□□□□□ -1.47
SMARCC1-206ENST00000485737 KIDINS220Q9ULH0 1771 aa5.85□□□□□ -1.47
SMARCC1-206ENST00000485737 CAMSAP1Q5T5Y3 1602 aa5.85□□□□□ -1.47
SMARCC1-206ENST00000485737 NEXMIFQ5QGS0 1516 aa5.84□□□□□ -1.47
SMARCC1-206ENST00000485737 ZFYVE9O95405 1425 aa5.84□□□□□ -1.47
SMARCC1-206ENST00000485737 NPATQ14207 1427 aa5.84□□□□□ -1.47
SMARCC1-206ENST00000485737 ERBB4Q15303 1308 aa5.84□□□□□ -1.47
SMARCC1-206ENST00000485737 TERTO14746 1132 aaKnown RBP5.84□□□□□ -1.47
SMARCC1-206ENST00000485737 HSP90AA1P07900 732 aaKnown RBP5.84□□□□□ -1.47
SMARCC1-206ENST00000485737 SNRPBP14678 240 aaKnown RBP5.84□□□□□ -1.47
SMARCC1-206ENST00000485737 TERF1P54274 439 aa5.84□□□□□ -1.47
SMARCC1-206ENST00000485737 MFAP1P55081 439 aaKnown RBP5.84□□□□□ -1.47
SMARCC1-206ENST00000485737 RAB15P59190 212 aa5.84□□□□□ -1.47
SMARCC1-206ENST00000485737 NUCB1Q02818 461 aa5.84□□□□□ -1.47
SMARCC1-206ENST00000485737 NFX1Q12986 1120 aaKnown RBP5.84□□□□□ -1.47
SMARCC1-206ENST00000485737 BMP2KLQ5H9B9 411 aa5.84□□□□□ -1.47
SMARCC1-206ENST00000485737 ATF7IPQ6VMQ6 1270 aa5.84□□□□□ -1.47
SMARCC1-206ENST00000485737 TRIM46Q7Z4K8 759 aa5.84□□□□□ -1.47
SMARCC1-206ENST00000485737 TRMT44Q8IYL2 757 aaKnown RBP5.84□□□□□ -1.47
SMARCC1-206ENST00000485737 ADAM32Q8TC27 787 aa5.84□□□□□ -1.47
SMARCC1-206ENST00000485737 ZNF428Q96B54 188 aa5.84□□□□□ -1.47
SMARCC1-206ENST00000485737 ITPKCQ96DU7 683 aa5.84□□□□□ -1.47
SMARCC1-206ENST00000485737 TRIM47Q96LD4 638 aa5.84□□□□□ -1.47
SMARCC1-206ENST00000485737 NAP1L5Q96NT1 182 aaPredicted RBP5.84□□□□□ -1.47
SMARCC1-206ENST00000485737 PPP1R9BQ96SB3 815 aa5.84□□□□□ -1.47
SMARCC1-206ENST00000485737 TRIM34Q9BYJ4 488 aa5.84□□□□□ -1.47
SMARCC1-206ENST00000485737 ZBTB40Q9NUA8 1239 aa5.84□□□□□ -1.47
SMARCC1-206ENST00000485737 MAP4K5Q9Y4K4 846 aa5.84□□□□□ -1.47
SMARCC1-206ENST00000485737 PNPLA6Q8IY17 1366 aa5.83□□□□□ -1.48
SMARCC1-206ENST00000485737 LOC100996750A0A140TA64 210 aa5.83□□□□□ -1.48
SMARCC1-206ENST00000485737 MTHFSP49914 203 aa5.83□□□□□ -1.48
SMARCC1-206ENST00000485737 CCDC173Q0VFZ6 552 aa5.83□□□□□ -1.48
SMARCC1-206ENST00000485737 SCARF1Q14162 830 aa5.83□□□□□ -1.48
SMARCC1-206ENST00000485737 ALDH1L2Q3SY69 923 aa5.83□□□□□ -1.48
SMARCC1-206ENST00000485737 MRPL14Q6P1L8 145 aaKnown RBP5.83□□□□□ -1.48
SMARCC1-206ENST00000485737 DZIP3Q86Y13 1208 aaKnown RBP5.83□□□□□ -1.48
SMARCC1-206ENST00000485737 CCDC116Q8IYX3 515 aa5.83□□□□□ -1.48
SMARCC1-206ENST00000485737 SSH1Q8WYL5 1049 aa5.83□□□□□ -1.48
SMARCC1-206ENST00000485737 TNPO1Q92973 898 aaKnown RBP5.83□□□□□ -1.48
SMARCC1-206ENST00000485737 PURBQ96QR8 312 aaKnown RBP5.83□□□□□ -1.48
SMARCC1-206ENST00000485737 PLEKHF1Q96S99 279 aa5.83□□□□□ -1.48
SMARCC1-206ENST00000485737 KCTD15Q96SI1 283 aaPredicted RBP5.83□□□□□ -1.48
SMARCC1-206ENST00000485737 KRTAP4-6Q9BYQ5 205 aa5.83□□□□□ -1.48
SMARCC1-206ENST00000485737 SMC4Q9NTJ3 1288 aa5.83□□□□□ -1.48
SMARCC1-206ENST00000485737 RRP7AQ9Y3A4 280 aaKnown RBP5.83□□□□□ -1.48
SMARCC1-206ENST00000485737 LRRC7Q96NW7 1537 aa5.83□□□□□ -1.48
SMARCC1-206ENST00000485737 HSP90AA2PQ14568 343 aaPredicted RBP5.82□□□□□ -1.48
SMARCC1-206ENST00000485737 HS1BP3Q53T59 392 aa5.82□□□□□ -1.48
SMARCC1-206ENST00000485737 C6orf118Q5T5N4 469 aa5.82□□□□□ -1.48
SMARCC1-206ENST00000485737 AFAP1Q8N556 730 aa5.82□□□□□ -1.48
SMARCC1-206ENST00000485737 IRF7Q92985 503 aa5.82□□□□□ -1.48
SMARCC1-206ENST00000485737 PKNOX2Q96KN3 472 aa5.82□□□□□ -1.48
SMARCC1-206ENST00000485737 ZFP42Q96MM3 310 aa5.82□□□□□ -1.48
SMARCC1-206ENST00000485737 KIF2CQ99661 725 aa5.82□□□□□ -1.48
SMARCC1-206ENST00000485737 OCSTAMPQ9BR26 566 aa5.82□□□□□ -1.48
SMARCC1-206ENST00000485737 BCL2L13Q9BXK5 485 aa5.82□□□□□ -1.48
SMARCC1-206ENST00000485737 GZF1Q9H116 711 aaPredicted RBP5.82□□□□□ -1.48
SMARCC1-206ENST00000485737 CHMP4BQ9H444 224 aaKnown RBP5.82□□□□□ -1.48
SMARCC1-206ENST00000485737 CDV3Q9UKY7 258 aaKnown RBP5.82□□□□□ -1.48
SMARCC1-206ENST00000485737 GPSM3Q9Y4H4 160 aa5.82□□□□□ -1.48
SMARCC1-206ENST00000485737 MLH3Q9UHC1 1453 aa5.82□□□□□ -1.48
SMARCC1-206ENST00000485737 FAM135BQ49AJ0 1406 aa5.82□□□□□ -1.48
Retrieved 100 of 20,778 RNA–protein pairs in 15.8 ms