RNA–Protein interactions for RNA: ENST00000485606.1

EXOSC10-209, Transcript of exosome component 10, humanhuman

TSL 3

Gene EXOSC10, Length 459 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EXOSC10-209ENST00000485606 HSP90AB3PQ58FF7 597 aa23.81■■□□□ 1.4
EXOSC10-209ENST00000485606 CHPF2Q9P2E5 772 aa23.81■■□□□ 1.4
EXOSC10-209ENST00000485606 WDR90Q96KV7 1748 aa23.81■■□□□ 1.4
EXOSC10-209ENST00000485606 AIMP1Q12904 312 aaKnown RBP23.8■■□□□ 1.4
EXOSC10-209ENST00000485606 CCDC184Q52MB2 194 aa23.8■■□□□ 1.4
EXOSC10-209ENST00000485606 RNF123Q5XPI4 1314 aa23.8■■□□□ 1.4
EXOSC10-209ENST00000485606 HOXA10P31260 410 aaPredicted RBP23.79■■□□□ 1.4
EXOSC10-209ENST00000485606 GNAI1P63096 354 aa23.79■■□□□ 1.4
EXOSC10-209ENST00000485606 DUSP27Q5VZP5 1158 aa23.79■■□□□ 1.4
EXOSC10-209ENST00000485606 DBF4Q9UBU7 674 aaPredicted RBP23.79■■□□□ 1.4
EXOSC10-209ENST00000485606 SNED1Q8TER0 1413 aa23.78■■□□□ 1.4
EXOSC10-209ENST00000485606 FKBP4Q02790 459 aaKnown RBP eCLIP23.78■■□□□ 1.4
EXOSC10-209ENST00000485606 RTKN2Q8IZC4 609 aa23.78■■□□□ 1.4
EXOSC10-209ENST00000485606 RPGRQ92834 1020 aaKnown RBP23.78■■□□□ 1.4
EXOSC10-209ENST00000485606 UTP14AQ9BVJ6 771 aaKnown RBP23.78■■□□□ 1.4
EXOSC10-209ENST00000485606 DPY19L2Q6NUT2 758 aa23.77■■□□□ 1.4
EXOSC10-209ENST00000485606 LAMB2P55268 1798 aa23.77■■□□□ 1.4
EXOSC10-209ENST00000485606 VEGFAP15692 232 aaPredicted RBP23.76■■□□□ 1.39
EXOSC10-209ENST00000485606 FSTL1Q12841 308 aa23.76■■□□□ 1.39
EXOSC10-209ENST00000485606 TCIRG1Q13488 830 aa23.76■■□□□ 1.39
EXOSC10-209ENST00000485606 OLFM4Q6UX06 510 aa23.76■■□□□ 1.39
EXOSC10-209ENST00000485606 NLRP10Q86W26 655 aa23.76■■□□□ 1.39
EXOSC10-209ENST00000485606 SLC10A5Q5PT55 438 aa23.75■■□□□ 1.39
EXOSC10-209ENST00000485606 PLBD2Q8NHP8 589 aa23.75■■□□□ 1.39
EXOSC10-209ENST00000485606 CRAMP1Q96RY5 1269 aa23.75■■□□□ 1.39
EXOSC10-209ENST00000485606 HYPKQ9NX55 129 aa23.75■■□□□ 1.39
EXOSC10-209ENST00000485606 ANP32CO43423 234 aa23.74■■□□□ 1.39
EXOSC10-209ENST00000485606 CC2D2BQ6DHV5 1058 aa23.74■■□□□ 1.39
EXOSC10-209ENST00000485606 RBM17Q96I25 401 aaKnown RBP23.74■■□□□ 1.39
EXOSC10-209ENST00000485606 NLRP3Q96P20 1036 aa23.74■■□□□ 1.39
EXOSC10-209ENST00000485606 APLP1P51693 650 aa23.73■■□□□ 1.39
EXOSC10-209ENST00000485606 C3orf67Q6ZVT6 689 aa23.73■■□□□ 1.39
EXOSC10-209ENST00000485606 CCDC27Q2M243 656 aa23.72■■□□□ 1.39
EXOSC10-209ENST00000485606 ANKRD13DQ6ZTN6 518 aa23.72■■□□□ 1.39
EXOSC10-209ENST00000485606 PSMD1Q99460 953 aa23.72■■□□□ 1.39
EXOSC10-209ENST00000485606 ZNF277Q9NRM2 450 aaPredicted RBP23.72■■□□□ 1.39
EXOSC10-209ENST00000485606 SMC1BQ8NDV3 1235 aa23.71■■□□□ 1.39
EXOSC10-209ENST00000485606 MRS2Q9HD23 443 aa23.71■■□□□ 1.39
EXOSC10-209ENST00000485606 SH3TC1Q8TE82 1336 aa23.7■■□□□ 1.38
EXOSC10-209ENST00000485606 POTECB2RU33 542 aa23.7■■□□□ 1.38
EXOSC10-209ENST00000485606 GRIPAP1Q4V328 841 aa23.7■■□□□ 1.38
EXOSC10-209ENST00000485606 TRMT112Q9UI30 125 aaKnown RBP23.7■■□□□ 1.38
EXOSC10-209ENST00000485606 DDX60Q8IY21 1712 aaKnown RBP23.7■■□□□ 1.38
EXOSC10-209ENST00000485606 PPEF1O14829 653 aaPredicted RBP23.69■■□□□ 1.38
EXOSC10-209ENST00000485606 IARSP41252 1262 aaKnown RBP23.69■■□□□ 1.38
EXOSC10-209ENST00000485606 NCBP3Q53F19 620 aaKnown RBP23.69■■□□□ 1.38
EXOSC10-209ENST00000485606 SYNE4Q8N205 404 aa23.69■■□□□ 1.38
EXOSC10-209ENST00000485606 SCN4AP35499 1836 aa23.68■■□□□ 1.38
EXOSC10-209ENST00000485606 DDNO94850 711 aaPredicted RBP23.68■■□□□ 1.38
EXOSC10-209ENST00000485606 C8orf58Q8NAV2 365 aa23.68■■□□□ 1.38
EXOSC10-209ENST00000485606 ISCA1Q9BUE6 129 aa23.68■■□□□ 1.38
EXOSC10-209ENST00000485606 CHMP4AQ9BY43 222 aa23.68■■□□□ 1.38
EXOSC10-209ENST00000485606 ABCC4O15439 1325 aa23.67■■□□□ 1.38
EXOSC10-209ENST00000485606 ELL2O00472 640 aaPredicted RBP23.67■■□□□ 1.38
EXOSC10-209ENST00000485606 HCLS1P14317 486 aaPredicted RBP23.67■■□□□ 1.38
EXOSC10-209ENST00000485606 WWC1Q8IX03 1113 aa23.67■■□□□ 1.38
EXOSC10-209ENST00000485606 L3MBTL3Q96JM7 780 aaPredicted RBP23.66■■□□□ 1.38
EXOSC10-209ENST00000485606 GOLGA2Q08379 1002 aa23.65■■□□□ 1.38
EXOSC10-209ENST00000485606 TRIM28Q13263 835 aaKnown RBP23.65■■□□□ 1.38
EXOSC10-209ENST00000485606 IL16Q14005 1332 aa23.64■■□□□ 1.38
EXOSC10-209ENST00000485606 ZNF541Q9H0D2 1346 aa23.64■■□□□ 1.38
EXOSC10-209ENST00000485606 CCDC30Q5VVM6 783 aa23.64■■□□□ 1.37
EXOSC10-209ENST00000485606 PHAXQ9H814 394 aaKnown RBP23.64■■□□□ 1.37
EXOSC10-209ENST00000485606 ATP6V0A2Q9Y487 856 aa23.64■■□□□ 1.37
EXOSC10-209ENST00000485606 COL4A5P29400 1685 aa23.64■■□□□ 1.37
EXOSC10-209ENST00000485606 ATP5J2-PTCD1G3V325 749 aa23.63■■□□□ 1.37
EXOSC10-209ENST00000485606 FZD9O00144 591 aa23.63■■□□□ 1.37
EXOSC10-209ENST00000485606 SLC51AQ86UW1 340 aa23.63■■□□□ 1.37
EXOSC10-209ENST00000485606 TSR2Q969E8 191 aaKnown RBP23.63■■□□□ 1.37
EXOSC10-209ENST00000485606 TMX4Q9H1E5 349 aaPredicted RBP23.63■■□□□ 1.37
EXOSC10-209ENST00000485606 TAF1P21675 1872 aa23.62■■□□□ 1.37
EXOSC10-209ENST00000485606 IQCA1LA6NCM1 817 aa23.62■■□□□ 1.37
EXOSC10-209ENST00000485606 TCERG1O14776 1098 aaKnown RBP23.62■■□□□ 1.37
EXOSC10-209ENST00000485606 BBOX1O75936 387 aa23.62■■□□□ 1.37
EXOSC10-209ENST00000485606 DDX46Q7L014 1031 aaKnown RBP23.62■■□□□ 1.37
EXOSC10-209ENST00000485606 RIC3Q7Z5B4 369 aa23.62■■□□□ 1.37
EXOSC10-209ENST00000485606 TSPYL6Q8N831 410 aa23.62■■□□□ 1.37
EXOSC10-209ENST00000485606 JDP2Q8WYK2 163 aa23.62■■□□□ 1.37
EXOSC10-209ENST00000485606 LRRC37AA6NMS7 1700 aa23.62■■□□□ 1.37
EXOSC10-209ENST00000485606 GRAPQ13588 217 aa23.61■■□□□ 1.37
EXOSC10-209ENST00000485606 GRAPLQ8TC17 118 aaPredicted RBP23.61■■□□□ 1.37
EXOSC10-209ENST00000485606 FAM89AQ96GI7 184 aa23.61■■□□□ 1.37
EXOSC10-209ENST00000485606 DNAJC5GQ8N7S2 189 aa23.6■■□□□ 1.37
EXOSC10-209ENST00000485606 ZNF428Q96B54 188 aa23.6■■□□□ 1.37
EXOSC10-209ENST00000485606 SP8Q8IXZ3 490 aa23.59■■□□□ 1.37
EXOSC10-209ENST00000485606 DDX58O95786 925 aaKnown RBP23.58■■□□□ 1.37
EXOSC10-209ENST00000485606 SF3B3Q15393 1217 aaKnown RBP23.58■■□□□ 1.37
EXOSC10-209ENST00000485606 GPC2Q8N158 579 aa23.58■■□□□ 1.37
EXOSC10-209ENST00000485606 LARGE2Q8N3Y3 721 aa23.58■■□□□ 1.37
EXOSC10-209ENST00000485606 RTFDC1Q9BY42 306 aaPredicted RBP23.58■■□□□ 1.37
EXOSC10-209ENST00000485606 VPS33BQ9H267 617 aa23.58■■□□□ 1.37
EXOSC10-209ENST00000485606 TAF1DQ9H5J8 278 aaPredicted RBP23.58■■□□□ 1.37
EXOSC10-209ENST00000485606 TWISTNBQ3B726 338 aaPredicted RBP23.57■■□□□ 1.36
EXOSC10-209ENST00000485606 TMC4Q7Z404 712 aa23.57■■□□□ 1.36
EXOSC10-209ENST00000485606 ZBTB38Q8NAP3 1195 aaPredicted RBP23.57■■□□□ 1.36
EXOSC10-209ENST00000485606 CACNA1FO60840 1977 aa23.57■■□□□ 1.36
EXOSC10-209ENST00000485606 IRS4O14654 1257 aaPredicted RBP23.56■■□□□ 1.36
EXOSC10-209ENST00000485606 EIF6P56537 245 aaKnown RBP23.56■■□□□ 1.36
EXOSC10-209ENST00000485606 CHADLQ6NUI6 762 aa23.56■■□□□ 1.36
EXOSC10-209ENST00000485606 CCDC191Q8NCU4 936 aa23.56■■□□□ 1.36
Retrieved 100 of 20,778 RNA–protein pairs in 79.7 ms