RNA–Protein interactions for RNA: ENST00000485513.1

HLA-F-227, Transcript of major histocompatibility complex, class I, F, humanhuman

Gene HLA-F, Length 778 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-F-227ENST00000485513 HOXA10P31260 410 aaPredicted RBP33.57■■■□□ 2.96
HLA-F-227ENST00000485513 KRT24Q2M2I5 525 aa33.57■■■□□ 2.96
HLA-F-227ENST00000485513 COPS6Q7L5N1 327 aa33.56■■■□□ 2.96
HLA-F-227ENST00000485513 AIMP1Q12904 312 aaKnown RBP33.55■■■□□ 2.96
HLA-F-227ENST00000485513 SYNE4Q8N205 404 aa33.55■■■□□ 2.96
HLA-F-227ENST00000485513 XAGE3Q8WTP9 111 aa33.55■■■□□ 2.96
HLA-F-227ENST00000485513 CC2D2BQ6DHV5 1058 aa33.54■■■□□ 2.96
HLA-F-227ENST00000485513 KLRG1Q96E93 195 aa33.54■■■□□ 2.96
HLA-F-227ENST00000485513 UTP14AQ9BVJ6 771 aaKnown RBP33.54■■■□□ 2.96
HLA-F-227ENST00000485513 DDX21Q9NR30 783 aaKnown RBP eCLIP33.54■■■□□ 2.96
HLA-F-227ENST00000485513 RBM17Q96I25 401 aaKnown RBP33.53■■■□□ 2.96
HLA-F-227ENST00000485513 SNED1Q8TER0 1413 aa33.53■■■□□ 2.96
HLA-F-227ENST00000485513 IARSP41252 1262 aaKnown RBP33.52■■■□□ 2.96
HLA-F-227ENST00000485513 HSP90AB3PQ58FF7 597 aa33.52■■■□□ 2.96
HLA-F-227ENST00000485513 CRAMP1Q96RY5 1269 aa33.52■■■□□ 2.96
HLA-F-227ENST00000485513 PSMD1Q99460 953 aa33.52■■■□□ 2.96
HLA-F-227ENST00000485513 ANKRD36CQ5JPF3 1778 aa33.52■■■□□ 2.96
HLA-F-227ENST00000485513 C3orf67Q6ZVT6 689 aa33.51■■■□□ 2.95
HLA-F-227ENST00000485513 NLRP3Q96P20 1036 aa33.51■■■□□ 2.95
HLA-F-227ENST00000485513 IQCA1LA6NCM1 817 aa33.5■■■□□ 2.95
HLA-F-227ENST00000485513 L3MBTL3Q96JM7 780 aaPredicted RBP33.5■■■□□ 2.95
HLA-F-227ENST00000485513 ZNF541Q9H0D2 1346 aa33.5■■■□□ 2.95
HLA-F-227ENST00000485513 SLC10A5Q5PT55 438 aa33.49■■■□□ 2.95
HLA-F-227ENST00000485513 HDGFL1Q5TGJ6 251 aa33.49■■■□□ 2.95
HLA-F-227ENST00000485513 CFAP44Q96MT7 982 aa33.49■■■□□ 2.95
HLA-F-227ENST00000485513 CHPF2Q9P2E5 772 aa33.49■■■□□ 2.95
HLA-F-227ENST00000485513 RNF123Q5XPI4 1314 aa33.49■■■□□ 2.95
HLA-F-227ENST00000485513 SCN4AP35499 1836 aa33.49■■■□□ 2.95
HLA-F-227ENST00000485513 HOXB7P09629 217 aa33.48■■■□□ 2.95
HLA-F-227ENST00000485513 PPEF1O14829 653 aaPredicted RBP33.47■■■□□ 2.95
HLA-F-227ENST00000485513 GRIPAP1Q4V328 841 aa33.47■■■□□ 2.95
HLA-F-227ENST00000485513 CHADLQ6NUI6 762 aa33.47■■■□□ 2.95
HLA-F-227ENST00000485513 NLRP10Q86W26 655 aa33.47■■■□□ 2.95
HLA-F-227ENST00000485513 TCIRG1Q13488 830 aa33.46■■■□□ 2.95
HLA-F-227ENST00000485513 FZD9O00144 591 aa33.45■■■□□ 2.95
HLA-F-227ENST00000485513 TCERG1O14776 1098 aaKnown RBP33.45■■■□□ 2.95
HLA-F-227ENST00000485513 POTEIP0CG38 1075 aa33.45■■■□□ 2.95
HLA-F-227ENST00000485513 POTEJP0CG39 1038 aa33.45■■■□□ 2.95
HLA-F-227ENST00000485513 JDP2Q8WYK2 163 aa33.45■■■□□ 2.95
HLA-F-227ENST00000485513 APAF1O14727 1248 aa33.44■■■□□ 2.94
HLA-F-227ENST00000485513 JMYQ8N9B5 988 aa33.44■■■□□ 2.94
HLA-F-227ENST00000485513 TAF1DQ9H5J8 278 aaPredicted RBP33.44■■■□□ 2.94
HLA-F-227ENST00000485513 MBIPQ9NS73 344 aa33.43■■■□□ 2.94
HLA-F-227ENST00000485513 DBF4Q9UBU7 674 aaPredicted RBP33.43■■■□□ 2.94
HLA-F-227ENST00000485513 DUSP27Q5VZP5 1158 aa33.42■■■□□ 2.94
HLA-F-227ENST00000485513 SLC51AQ86UW1 340 aa33.42■■■□□ 2.94
HLA-F-227ENST00000485513 TRMT112Q9UI30 125 aaKnown RBP33.42■■■□□ 2.94
HLA-F-227ENST00000485513 TMX4Q9H1E5 349 aaPredicted RBP33.41■■■□□ 2.94
HLA-F-227ENST00000485513 LAMB2P55268 1798 aa33.4■■■□□ 2.94
HLA-F-227ENST00000485513 HCLS1P14317 486 aaPredicted RBP33.4■■■□□ 2.94
HLA-F-227ENST00000485513 IFFO2Q5TF58 517 aa33.4■■■□□ 2.94
HLA-F-227ENST00000485513 LDHDQ86WU2 507 aa33.4■■■□□ 2.94
HLA-F-227ENST00000485513 PLBD2Q8NHP8 589 aa33.4■■■□□ 2.94
HLA-F-227ENST00000485513 HACL1Q9UJ83 578 aa33.4■■■□□ 2.94
HLA-F-227ENST00000485513 ABCC4O15439 1325 aa33.39■■■□□ 2.94
HLA-F-227ENST00000485513 SH3TC1Q8TE82 1336 aa33.39■■■□□ 2.94
HLA-F-227ENST00000485513 ZNF853P0CG23 659 aa33.39■■■□□ 2.94
HLA-F-227ENST00000485513 CALD1Q05682 793 aaKnown RBP33.39■■■□□ 2.94
HLA-F-227ENST00000485513 ANKRD13DQ6ZTN6 518 aa33.39■■■□□ 2.94
HLA-F-227ENST00000485513 GPC2Q8N158 579 aa33.39■■■□□ 2.94
HLA-F-227ENST00000485513 LARGE2Q8N3Y3 721 aa33.38■■■□□ 2.93
HLA-F-227ENST00000485513 IFT57Q9NWB7 429 aa33.38■■■□□ 2.93
HLA-F-227ENST00000485513 HYPKQ9NX55 129 aa33.38■■■□□ 2.93
HLA-F-227ENST00000485513 ATP6V0A2Q9Y487 856 aa33.38■■■□□ 2.93
HLA-F-227ENST00000485513 COL4A5P29400 1685 aa33.38■■■□□ 2.93
HLA-F-227ENST00000485513 EIF6P56537 245 aaKnown RBP33.37■■■□□ 2.93
HLA-F-227ENST00000485513 GNAI1P63096 354 aa33.36■■■□□ 2.93
HLA-F-227ENST00000485513 EAPPQ56P03 285 aaPredicted RBP33.36■■■□□ 2.93
HLA-F-227ENST00000485513 EPHX2P34913 555 aa33.35■■■□□ 2.93
HLA-F-227ENST00000485513 BBOX1O75936 387 aa33.34■■■□□ 2.93
HLA-F-227ENST00000485513 ZNF428Q96B54 188 aa33.34■■■□□ 2.93
HLA-F-227ENST00000485513 DDX46Q7L014 1031 aaKnown RBP33.33■■■□□ 2.93
HLA-F-227ENST00000485513 ISCA1Q9BUE6 129 aa33.33■■■□□ 2.93
HLA-F-227ENST00000485513 GJA3Q9Y6H8 435 aa33.33■■■□□ 2.93
HLA-F-227ENST00000485513 CREBZFQ9NS37 354 aa33.32■■■□□ 2.92
HLA-F-227ENST00000485513 ATP5J2-PTCD1G3V325 749 aa33.31■■■□□ 2.92
HLA-F-227ENST00000485513 PPIP5K2O43314 1243 aa33.31■■■□□ 2.92
HLA-F-227ENST00000485513 PNMA8AQ86V59 439 aaPredicted RBP33.31■■■□□ 2.92
HLA-F-227ENST00000485513 NIM1KQ8IY84 436 aa33.31■■■□□ 2.92
HLA-F-227ENST00000485513 CLEC11AQ9Y240 323 aa33.31■■■□□ 2.92
HLA-F-227ENST00000485513 SP8Q8IXZ3 490 aa33.3■■■□□ 2.92
HLA-F-227ENST00000485513 SUPT20HQ8NEM7 779 aa33.3■■■□□ 2.92
HLA-F-227ENST00000485513 VPS33BQ9H267 617 aa33.3■■■□□ 2.92
HLA-F-227ENST00000485513 ADAMTSL1Q8N6G6 1762 aa33.29■■■□□ 2.92
HLA-F-227ENST00000485513 DDX60Q8IY21 1712 aaKnown RBP33.29■■■□□ 2.92
HLA-F-227ENST00000485513 ELL2O00472 640 aaPredicted RBP33.29■■■□□ 2.92
HLA-F-227ENST00000485513 GRAPQ13588 217 aa33.29■■■□□ 2.92
HLA-F-227ENST00000485513 AOC3Q16853 763 aa33.29■■■□□ 2.92
HLA-F-227ENST00000485513 GRAPLQ8TC17 118 aaPredicted RBP33.29■■■□□ 2.92
HLA-F-227ENST00000485513 PASKQ96RG2 1323 aa33.28■■■□□ 2.92
HLA-F-227ENST00000485513 DPP8Q6V1X1 898 aaPredicted RBP33.28■■■□□ 2.92
HLA-F-227ENST00000485513 FAM89AQ96GI7 184 aa33.28■■■□□ 2.92
HLA-F-227ENST00000485513 RTFDC1Q9BY42 306 aaPredicted RBP33.28■■■□□ 2.92
HLA-F-227ENST00000485513 TAF1P21675 1872 aa33.27■■■□□ 2.92
HLA-F-227ENST00000485513 PCNTO95613 3336 aa33.27■■■□□ 2.92
HLA-F-227ENST00000485513 LMOD1P29536 600 aaPredicted RBP33.26■■■□□ 2.91
HLA-F-227ENST00000485513 GOLGA2Q08379 1002 aa33.26■■■□□ 2.91
HLA-F-227ENST00000485513 TRIM28Q13263 835 aaKnown RBP33.26■■■□□ 2.91
HLA-F-227ENST00000485513 CCDC184Q52MB2 194 aa33.26■■■□□ 2.91
HLA-F-227ENST00000485513 RIC3Q7Z5B4 369 aa33.26■■■□□ 2.91
Retrieved 100 of 20,778 RNA–protein pairs in 123.7 ms