RNA–Protein interactions for RNA: ENST00000485102.1

HDAC6-227, Transcript of histone deacetylase 6, humanhuman

TSL 3

Gene HDAC6, Length 667 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-227ENST00000485102 PNNQ9H307 717 aaKnown RBP17.23■□□□□ 0.35
HDAC6-227ENST00000485102 EAPPQ56P03 285 aaPredicted RBP17.22■□□□□ 0.35
HDAC6-227ENST00000485102 GIGYF2Q6Y7W6 1299 aaKnown RBP17.22■□□□□ 0.35
HDAC6-227ENST00000485102 NUTM1Q86Y26 1132 aa17.22■□□□□ 0.35
HDAC6-227ENST00000485102 CNTROBQ8N137 903 aa17.22■□□□□ 0.35
HDAC6-227ENST00000485102 RRP7AQ9Y3A4 280 aaKnown RBP17.22■□□□□ 0.35
HDAC6-227ENST00000485102 RNF123Q5XPI4 1314 aa17.21■□□□□ 0.35
HDAC6-227ENST00000485102 UBN2Q6ZU65 1347 aa17.21■□□□□ 0.35
HDAC6-227ENST00000485102 RASSF10A6NK89 507 aa17.21■□□□□ 0.35
HDAC6-227ENST00000485102 VEGFBP49765 207 aa17.21■□□□□ 0.35
HDAC6-227ENST00000485102 VPS33BQ9H267 617 aa17.21■□□□□ 0.35
HDAC6-227ENST00000485102 FOXN1O15353 648 aa17.2■□□□□ 0.34
HDAC6-227ENST00000485102 CAPN15O75808 1086 aa17.2■□□□□ 0.34
HDAC6-227ENST00000485102 EIF6P56537 245 aaKnown RBP17.2■□□□□ 0.34
HDAC6-227ENST00000485102 PARP10Q53GL7 1025 aa17.2■□□□□ 0.34
HDAC6-227ENST00000485102 SLC10A5Q5PT55 438 aa17.2■□□□□ 0.34
HDAC6-227ENST00000485102 SUSD4Q5VX71 490 aa17.2■□□□□ 0.34
HDAC6-227ENST00000485102 LRP10Q7Z4F1 713 aa17.2■□□□□ 0.34
HDAC6-227ENST00000485102 NGEFQ8N5V2 710 aa17.2■□□□□ 0.34
HDAC6-227ENST00000485102 RPGRQ92834 1020 aaKnown RBP17.2■□□□□ 0.34
HDAC6-227ENST00000485102 RBM17Q96I25 401 aaKnown RBP17.2■□□□□ 0.34
HDAC6-227ENST00000485102 BABAM1Q9NWV8 329 aa17.2■□□□□ 0.34
HDAC6-227ENST00000485102 WBP1LQ9NX94 342 aa17.2■□□□□ 0.34
HDAC6-227ENST00000485102 CLEC11AQ9Y240 323 aa17.2■□□□□ 0.34
HDAC6-227ENST00000485102 NTSR2O95665 410 aa17.19■□□□□ 0.34
HDAC6-227ENST00000485102 CTCFP49711 727 aaPredicted RBP17.19■□□□□ 0.34
HDAC6-227ENST00000485102 PPP1R42Q7Z4L9 355 aa17.19■□□□□ 0.34
HDAC6-227ENST00000485102 MYL6BP14649 208 aa17.18■□□□□ 0.34
HDAC6-227ENST00000485102 GPTP24298 496 aa17.18■□□□□ 0.34
HDAC6-227ENST00000485102 DEFB115Q30KQ5 88 aa17.18■□□□□ 0.34
HDAC6-227ENST00000485102 MAP1SQ66K74 1059 aaPredicted RBP17.18■□□□□ 0.34
HDAC6-227ENST00000485102 ZBTB3Q9H5J0 574 aa17.18■□□□□ 0.34
HDAC6-227ENST00000485102 COL4A5P29400 1685 aa17.17■□□□□ 0.34
HDAC6-227ENST00000485102 PDIA6Q15084 440 aa17.17■□□□□ 0.34
HDAC6-227ENST00000485102 NLRP3Q96P20 1036 aa17.17■□□□□ 0.34
HDAC6-227ENST00000485102 THUMPD2Q9BTF0 503 aaKnown RBP17.17■□□□□ 0.34
HDAC6-227ENST00000485102 LMOD1P29536 600 aaPredicted RBP17.16■□□□□ 0.34
HDAC6-227ENST00000485102 ZEB1P37275 1124 aaPredicted RBP17.16■□□□□ 0.34
HDAC6-227ENST00000485102 SCNN1DP51172 638 aa17.16■□□□□ 0.34
HDAC6-227ENST00000485102 USP50Q70EL3 339 aaPredicted RBP17.16■□□□□ 0.34
HDAC6-227ENST00000485102 LARGE2Q8N3Y3 721 aa17.16■□□□□ 0.34
HDAC6-227ENST00000485102 AIDAQ96BJ3 306 aa17.16■□□□□ 0.34
HDAC6-227ENST00000485102 DDX21Q9NR30 783 aaKnown RBP eCLIP17.16■□□□□ 0.34
HDAC6-227ENST00000485102 PPEF1O14829 653 aaPredicted RBP17.15■□□□□ 0.34
HDAC6-227ENST00000485102 RTFDC1Q9BY42 306 aaPredicted RBP17.15■□□□□ 0.34
HDAC6-227ENST00000485102 ATP6V0A2Q9Y487 856 aa17.15■□□□□ 0.34
HDAC6-227ENST00000485102 MAPK8IP3Q9UPT6 1336 aa17.15■□□□□ 0.34
HDAC6-227ENST00000485102 LTBP1Q14766 1721 aa17.14■□□□□ 0.33
HDAC6-227ENST00000485102 BBOX1O75936 387 aa17.14■□□□□ 0.33
HDAC6-227ENST00000485102 MAP2K1Q02750 393 aaPredicted RBP17.14■□□□□ 0.33
HDAC6-227ENST00000485102 C3orf67Q6ZVT6 689 aa17.14■□□□□ 0.33
HDAC6-227ENST00000485102 UTP14AQ9BVJ6 771 aaKnown RBP17.14■□□□□ 0.33
HDAC6-227ENST00000485102 TSPYL4Q9UJ04 414 aa17.14■□□□□ 0.33
HDAC6-227ENST00000485102 GJA3Q9Y6H8 435 aa17.14■□□□□ 0.33
HDAC6-227ENST00000485102 EPS15P42566 896 aa17.13■□□□□ 0.33
HDAC6-227ENST00000485102 NIM1KQ8IY84 436 aa17.13■□□□□ 0.33
HDAC6-227ENST00000485102 TMX4Q9H1E5 349 aaPredicted RBP17.13■□□□□ 0.33
HDAC6-227ENST00000485102 WDR33Q9C0J8 1336 aaKnown RBP17.13■□□□□ 0.33
HDAC6-227ENST00000485102 HSP90AB3PQ58FF7 597 aa17.12■□□□□ 0.33
HDAC6-227ENST00000485102 SP8Q8IXZ3 490 aa17.12■□□□□ 0.33
HDAC6-227ENST00000485102 SUPT20HQ8NEM7 779 aa17.12■□□□□ 0.33
HDAC6-227ENST00000485102 PPIP5K2O43314 1243 aa17.11■□□□□ 0.33
HDAC6-227ENST00000485102 RIPK4P57078 832 aa17.11■□□□□ 0.33
HDAC6-227ENST00000485102 GPRC5DQ9NZD1 345 aa17.11■□□□□ 0.33
HDAC6-227ENST00000485102 ZNRF3Q9ULT6 936 aa17.11■□□□□ 0.33
HDAC6-227ENST00000485102 TRPM7Q96QT4 1865 aa17.1■□□□□ 0.33
HDAC6-227ENST00000485102 EIF2S2P20042 333 aaKnown RBP17.1■□□□□ 0.33
HDAC6-227ENST00000485102 LBX1P52954 281 aa17.1■□□□□ 0.33
HDAC6-227ENST00000485102 ADARB2Q9NS39 739 aaKnown RBP17.1■□□□□ 0.33
HDAC6-227ENST00000485102 PGAP2Q9UHJ9 254 aa17.1■□□□□ 0.33
HDAC6-227ENST00000485102 ABT1Q9ULW3 272 aaKnown RBP17.1■□□□□ 0.33
HDAC6-227ENST00000485102 ABCC4O15439 1325 aa17.1■□□□□ 0.33
HDAC6-227ENST00000485102 CDHR2Q9BYE9 1310 aa17.1■□□□□ 0.33
HDAC6-227ENST00000485102 HSPA8P11142 646 aaKnown RBP17.09■□□□□ 0.33
HDAC6-227ENST00000485102 TMPOP42166 694 aaKnown RBP17.09■□□□□ 0.33
HDAC6-227ENST00000485102 ECE1P42892 770 aa17.09■□□□□ 0.33
HDAC6-227ENST00000485102 CXCL9Q07325 125 aa17.09■□□□□ 0.33
HDAC6-227ENST00000485102 LMOD3Q0VAK6 560 aa17.09■□□□□ 0.33
HDAC6-227ENST00000485102 AOC3Q16853 763 aa17.09■□□□□ 0.33
HDAC6-227ENST00000485102 PROSER3Q2NL68 480 aa17.09■□□□□ 0.33
HDAC6-227ENST00000485102 CST9Q5W186 159 aa17.09■□□□□ 0.33
HDAC6-227ENST00000485102 SLC51AQ86UW1 340 aa17.09■□□□□ 0.33
HDAC6-227ENST00000485102 NLRP10Q86W26 655 aa17.09■□□□□ 0.33
HDAC6-227ENST00000485102 ANKRD36CQ5JPF3 1778 aa17.09■□□□□ 0.33
HDAC6-227ENST00000485102 TCERG1O14776 1098 aaKnown RBP17.08■□□□□ 0.32
HDAC6-227ENST00000485102 KIAA2012Q0VF49 1180 aa17.08■□□□□ 0.32
HDAC6-227ENST00000485102 TCIRG1Q13488 830 aa17.08■□□□□ 0.32
HDAC6-227ENST00000485102 RALBP1Q15311 655 aa17.08■□□□□ 0.32
HDAC6-227ENST00000485102 COPS6Q7L5N1 327 aa17.08■□□□□ 0.32
HDAC6-227ENST00000485102 TMC4Q7Z404 712 aa17.08■□□□□ 0.32
HDAC6-227ENST00000485102 ZC3H15Q8WU90 426 aaKnown RBP17.08■□□□□ 0.32
HDAC6-227ENST00000485102 TLL2Q9Y6L7 1015 aa17.08■□□□□ 0.32
HDAC6-227ENST00000485102 THSD7BQ9C0I4 1608 aa17.07■□□□□ 0.32
HDAC6-227ENST00000485102 CHL1O00533 1208 aa17.07■□□□□ 0.32
HDAC6-227ENST00000485102 MPNDQ8N594 471 aa17.07■□□□□ 0.32
HDAC6-227ENST00000485102 CAPNS2Q96L46 248 aa17.07■□□□□ 0.32
HDAC6-227ENST00000485102 SH3TC1Q8TE82 1336 aa17.06■□□□□ 0.32
HDAC6-227ENST00000485102 ANXA1P04083 346 aa17.06■□□□□ 0.32
HDAC6-227ENST00000485102 MAP2K2P36507 400 aa17.06■□□□□ 0.32
HDAC6-227ENST00000485102 FMR1Q06787 632 aaKnown RBP eCLIP17.06■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 91.8 ms