RNA–Protein interactions for RNA: ENST00000485063.1

MACF1-220, Transcript of microtubule-actin crosslinking factor 1, humanhuman

TSL 3

Gene MACF1, Length 438 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MACF1-220ENST00000485063 CACNA1FO60840 1977 aa10.06□□□□□ -0.8
MACF1-220ENST00000485063 ANKRD36CQ5JPF3 1778 aa10.06□□□□□ -0.8
MACF1-220ENST00000485063 FANCIQ9NVI1 1328 aa10.06□□□□□ -0.8
MACF1-220ENST00000485063 A0A0G2JLW4 131 aa10.05□□□□□ -0.8
MACF1-220ENST00000485063 H0YIN7 160 aa10.05□□□□□ -0.8
MACF1-220ENST00000485063 DDX58O95786 925 aaKnown RBP10.05□□□□□ -0.8
MACF1-220ENST00000485063 PROSER3Q2NL68 480 aa10.05□□□□□ -0.8
MACF1-220ENST00000485063 PPP1R42Q7Z4L9 355 aa10.05□□□□□ -0.8
MACF1-220ENST00000485063 PIM2Q9P1W9 311 aa10.05□□□□□ -0.8
MACF1-220ENST00000485063 CHD4Q14839 1912 aa10.05□□□□□ -0.8
MACF1-220ENST00000485063 KIAA1551Q9HCM1 1747 aa10.04□□□□□ -0.8
MACF1-220ENST00000485063 PXDNLA1KZ92 1463 aa10.04□□□□□ -0.8
MACF1-220ENST00000485063 FAM177BA6PVY3 158 aa10.04□□□□□ -0.8
MACF1-220ENST00000485063 E9PSI1 815 aa10.04□□□□□ -0.8
MACF1-220ENST00000485063 DPEP1P16444 411 aa10.04□□□□□ -0.8
MACF1-220ENST00000485063 PARP10Q53GL7 1025 aa10.04□□□□□ -0.8
MACF1-220ENST00000485063 PRR5LQ6MZQ0 368 aa10.04□□□□□ -0.8
MACF1-220ENST00000485063 ANKRD13DQ6ZTN6 518 aa10.04□□□□□ -0.8
MACF1-220ENST00000485063 LRP10Q7Z4F1 713 aa10.04□□□□□ -0.8
MACF1-220ENST00000485063 RIC3Q7Z5B4 369 aa10.04□□□□□ -0.8
MACF1-220ENST00000485063 TSPYL6Q8N831 410 aa10.04□□□□□ -0.8
MACF1-220ENST00000485063 PLBD2Q8NHP8 589 aa10.04□□□□□ -0.8
MACF1-220ENST00000485063 BRIP1Q9BX63 1249 aa10.04□□□□□ -0.8
MACF1-220ENST00000485063 BCS1LQ9Y276 419 aa10.04□□□□□ -0.8
MACF1-220ENST00000485063 ATP10DQ9P241 1426 aa10.04□□□□□ -0.8
MACF1-220ENST00000485063 BRCA1P38398 1863 aaKnown RBP10.04□□□□□ -0.8
MACF1-220ENST00000485063 DLEC1Q9Y238 1755 aa10.03□□□□□ -0.8
MACF1-220ENST00000485063 GPTP24298 496 aa10.03□□□□□ -0.8
MACF1-220ENST00000485063 EXOSC9Q06265 439 aaKnown RBP10.03□□□□□ -0.8
MACF1-220ENST00000485063 C2CD5Q86YS7 1000 aa10.03□□□□□ -0.8
MACF1-220ENST00000485063 ANKRD31Q8N7Z5 1873 aa10.03□□□□□ -0.8
MACF1-220ENST00000485063 WWC3Q9ULE0 1092 aa10.03□□□□□ -0.8
MACF1-220ENST00000485063 ARFGEF2Q9Y6D5 1785 aa10.03□□□□□ -0.8
MACF1-220ENST00000485063 CHRNA5P30532 468 aa10.02□□□□□ -0.81
MACF1-220ENST00000485063 TCIRG1Q13488 830 aa10.02□□□□□ -0.81
MACF1-220ENST00000485063 DALRD3Q5D0E6 543 aaKnown RBP10.02□□□□□ -0.81
MACF1-220ENST00000485063 ZNF34Q8IZ26 560 aa10.02□□□□□ -0.81
MACF1-220ENST00000485063 PHAXQ9H814 394 aaKnown RBP10.02□□□□□ -0.81
MACF1-220ENST00000485063 ARFGEF1Q9Y6D6 1849 aa10.02□□□□□ -0.81
MACF1-220ENST00000485063 ZNF521Q96K83 1311 aa10.02□□□□□ -0.81
MACF1-220ENST00000485063 CACNA1SQ13698 1873 aa10.02□□□□□ -0.81
MACF1-220ENST00000485063 IBTKQ9P2D0 1353 aaPredicted RBP10.01□□□□□ -0.81
MACF1-220ENST00000485063 VAMP4O75379 141 aa10.01□□□□□ -0.81
MACF1-220ENST00000485063 YBX3P16989 372 aaKnown RBP eCLIP10.01□□□□□ -0.81
MACF1-220ENST00000485063 CCDC24Q8N4L8 307 aa10.01□□□□□ -0.81
MACF1-220ENST00000485063 TTLL6Q8N841 843 aa10.01□□□□□ -0.81
MACF1-220ENST00000485063 ZNF622Q969S3 477 aaKnown RBP eCLIP10.01□□□□□ -0.811e-8■□□□□ 10.3
MACF1-220ENST00000485063 UTP14AQ9BVJ6 771 aaKnown RBP10.01□□□□□ -0.81
MACF1-220ENST00000485063 RNF123Q5XPI4 1314 aa10.01□□□□□ -0.81
MACF1-220ENST00000485063 TCERG1O14776 1098 aaKnown RBP10□□□□□ -0.81
MACF1-220ENST00000485063 KCNA3P22001 575 aa10□□□□□ -0.81
MACF1-220ENST00000485063 SLFN5Q08AF3 891 aa10□□□□□ -0.81
MACF1-220ENST00000485063 NEXNQ0ZGT2 675 aa10□□□□□ -0.81
MACF1-220ENST00000485063 SUSD4Q5VX71 490 aa10□□□□□ -0.81
MACF1-220ENST00000485063 NUTM1Q86Y26 1132 aa10□□□□□ -0.81
MACF1-220ENST00000485063 CNKSR1Q969H4 720 aa10□□□□□ -0.81
MACF1-220ENST00000485063 MASTLQ96GX5 879 aa10□□□□□ -0.81
MACF1-220ENST00000485063 TRMT112Q9UI30 125 aaKnown RBP10□□□□□ -0.81
MACF1-220ENST00000485063 UBN2Q6ZU65 1347 aa10□□□□□ -0.81
MACF1-220ENST00000485063 SRCAPQ6ZRS2 3230 aa9.99□□□□□ -0.81
MACF1-220ENST00000485063 POTEB2H3BUK9 544 aa9.99□□□□□ -0.81
MACF1-220ENST00000485063 NTSR2O95665 410 aa9.99□□□□□ -0.81
MACF1-220ENST00000485063 HSP90B1P14625 803 aaKnown RBP9.99□□□□□ -0.81
MACF1-220ENST00000485063 NPR1P16066 1061 aa9.99□□□□□ -0.81
MACF1-220ENST00000485063 YY1P25490 414 aa9.99□□□□□ -0.81
MACF1-220ENST00000485063 ALDH1B1P30837 517 aa9.99□□□□□ -0.81
MACF1-220ENST00000485063 HNRNPUQ00839 825 aaKnown RBP eCLIP9.99□□□□□ -0.81
MACF1-220ENST00000485063 ERFEQ4G0M1 354 aa9.99□□□□□ -0.81
MACF1-220ENST00000485063 ASTLQ6HA08 431 aaPredicted RBP9.99□□□□□ -0.81
MACF1-220ENST00000485063 STYK1Q6J9G0 422 aa9.99□□□□□ -0.81
MACF1-220ENST00000485063 KSR2Q6VAB6 950 aa9.99□□□□□ -0.81
MACF1-220ENST00000485063 ARHGAP27Q6ZUM4 889 aa9.99□□□□□ -0.81
MACF1-220ENST00000485063 NLRP10Q86W26 655 aa9.99□□□□□ -0.81
MACF1-220ENST00000485063 RPGRQ92834 1020 aaKnown RBP9.99□□□□□ -0.81
MACF1-220ENST00000485063 NLRP3Q96P20 1036 aa9.99□□□□□ -0.81
MACF1-220ENST00000485063 COL11A2P13942 1736 aaPredicted RBP9.99□□□□□ -0.81
MACF1-220ENST00000485063 PI4KAP2A4QPH2 592 aa9.98□□□□□ -0.81
MACF1-220ENST00000485063 ATP5J2-PTCD1G3V325 749 aa9.98□□□□□ -0.81
MACF1-220ENST00000485063 SRGNP10124 158 aa9.98□□□□□ -0.81
MACF1-220ENST00000485063 FLIIQ13045 1269 aa9.98□□□□□ -0.81
MACF1-220ENST00000485063 FKBP5Q13451 457 aaPredicted RBP9.98□□□□□ -0.81
MACF1-220ENST00000485063 PI4KAP1Q8N8J0 262 aa9.98□□□□□ -0.81
MACF1-220ENST00000485063 ZNF428Q96B54 188 aa9.98□□□□□ -0.81
MACF1-220ENST00000485063 MYD88Q99836 296 aa9.98□□□□□ -0.81
MACF1-220ENST00000485063 METTL22Q9BUU2 404 aaPredicted RBP9.98□□□□□ -0.81
MACF1-220ENST00000485063 MAP3K2Q9Y2U5 619 aa9.98□□□□□ -0.81
MACF1-220ENST00000485063 SH3TC1Q8TE82 1336 aa9.98□□□□□ -0.81
MACF1-220ENST00000485063 RIC1Q4ADV7 1423 aa9.98□□□□□ -0.81
MACF1-220ENST00000485063 TRIM28Q13263 835 aaKnown RBP9.97□□□□□ -0.81
MACF1-220ENST00000485063 SOGA3Q5TF21 947 aa9.97□□□□□ -0.81
MACF1-220ENST00000485063 CCDC191Q8NCU4 936 aa9.97□□□□□ -0.81
MACF1-220ENST00000485063 CDCA7LQ96GN5 454 aa9.97□□□□□ -0.81
MACF1-220ENST00000485063 MS4A3Q96HJ5 214 aa9.97□□□□□ -0.81
MACF1-220ENST00000485063 RBM17Q96I25 401 aaKnown RBP9.97□□□□□ -0.81
MACF1-220ENST00000485063 ISCA1Q9BUE6 129 aa9.97□□□□□ -0.81
MACF1-220ENST00000485063 TMX4Q9H1E5 349 aaPredicted RBP9.97□□□□□ -0.81
MACF1-220ENST00000485063 KLRG2A4D1S0 409 aaPredicted RBP9.96□□□□□ -0.82
MACF1-220ENST00000485063 CT47B1P0C2W7 299 aaPredicted RBP9.96□□□□□ -0.82
MACF1-220ENST00000485063 SLC10A5Q5PT55 438 aa9.96□□□□□ -0.82
MACF1-220ENST00000485063 G2E3Q7L622 706 aa9.96□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 12.1 ms