RNA–Protein interactions for RNA: ENST00000485023.1

DDR1-246, Transcript of discoidin domain receptor tyrosine kinase 1, humanhuman

TSL 3

Gene DDR1, Length 515 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDR1-246ENST00000485023 CHD4Q14839 1912 aa20.86■□□□□ 0.93
DDR1-246ENST00000485023 ARFGEF1Q9Y6D6 1849 aa20.85■□□□□ 0.93
DDR1-246ENST00000485023 VAMP4O75379 141 aa20.85■□□□□ 0.93
DDR1-246ENST00000485023 SLC4A2P04920 1241 aa20.85■□□□□ 0.93
DDR1-246ENST00000485023 MYD88Q99836 296 aa20.85■□□□□ 0.93
DDR1-246ENST00000485023 SYNE4Q8N205 404 aa20.84■□□□□ 0.93
DDR1-246ENST00000485023 CDCA7LQ96GN5 454 aa20.84■□□□□ 0.93
DDR1-246ENST00000485023 MASTLQ96GX5 879 aa20.84■□□□□ 0.93
DDR1-246ENST00000485023 TRMT112Q9UI30 125 aaKnown RBP20.84■□□□□ 0.93
DDR1-246ENST00000485023 CACNA1SQ13698 1873 aa20.84■□□□□ 0.93
DDR1-246ENST00000485023 DDX58O95786 925 aaKnown RBP20.83■□□□□ 0.93
DDR1-246ENST00000485023 STYK1Q6J9G0 422 aa20.83■□□□□ 0.93
DDR1-246ENST00000485023 PRPF40BQ6NWY9 871 aaKnown RBP20.83■□□□□ 0.93
DDR1-246ENST00000485023 C3orf67Q6ZVT6 689 aa20.83■□□□□ 0.93
DDR1-246ENST00000485023 ISCA1Q9BUE6 129 aa20.83■□□□□ 0.93
DDR1-246ENST00000485023 MAP3K2Q9Y2U5 619 aa20.83■□□□□ 0.93
DDR1-246ENST00000485023 E9PSI1 815 aa20.82■□□□□ 0.92
DDR1-246ENST00000485023 C21orf2O43822 256 aa20.82■□□□□ 0.92
DDR1-246ENST00000485023 NPR1P16066 1061 aa20.82■□□□□ 0.92
DDR1-246ENST00000485023 RTL5Q5HYW3 569 aaPredicted RBP20.82■□□□□ 0.92
DDR1-246ENST00000485023 KLRG2A4D1S0 409 aaPredicted RBP20.81■□□□□ 0.92
DDR1-246ENST00000485023 HCLS1P14317 486 aaPredicted RBP20.81■□□□□ 0.92
DDR1-246ENST00000485023 RASSF7Q02833 373 aa20.81■□□□□ 0.92
DDR1-246ENST00000485023 CNKSR1Q969H4 720 aa20.81■□□□□ 0.92
DDR1-246ENST00000485023 SH3TC1Q8TE82 1336 aa20.8■□□□□ 0.92
DDR1-246ENST00000485023 RIC1Q4ADV7 1423 aa20.8■□□□□ 0.92
DDR1-246ENST00000485023 PI4KAP2A4QPH2 592 aa20.8■□□□□ 0.92
DDR1-246ENST00000485023 SLFN5Q08AF3 891 aa20.8■□□□□ 0.92
DDR1-246ENST00000485023 PI4KAP1Q8N8J0 262 aa20.8■□□□□ 0.92
DDR1-246ENST00000485023 RPGRQ92834 1020 aaKnown RBP20.8■□□□□ 0.92
DDR1-246ENST00000485023 ADCY9O60503 1353 aa20.8■□□□□ 0.92
DDR1-246ENST00000485023 FLIIQ13045 1269 aa20.79■□□□□ 0.92
DDR1-246ENST00000485023 FKBP5Q13451 457 aaPredicted RBP20.79■□□□□ 0.92
DDR1-246ENST00000485023 FAM89AQ96GI7 184 aa20.79■□□□□ 0.92
DDR1-246ENST00000485023 RNF123Q5XPI4 1314 aa20.78■□□□□ 0.92
DDR1-246ENST00000485023 SLX4Q8IY92 1834 aa20.78■□□□□ 0.92
DDR1-246ENST00000485023 CRY2Q49AN0 593 aa20.78■□□□□ 0.92
DDR1-246ENST00000485023 KSR2Q6VAB6 950 aa20.78■□□□□ 0.92
DDR1-246ENST00000485023 ZNF784Q8NCA9 323 aaPredicted RBP20.78■□□□□ 0.92
DDR1-246ENST00000485023 METTL22Q9BUU2 404 aaPredicted RBP20.78■□□□□ 0.92
DDR1-246ENST00000485023 HNRNPUQ00839 825 aaKnown RBP eCLIP20.77■□□□□ 0.92
DDR1-246ENST00000485023 OLFM4Q6UX06 510 aa20.77■□□□□ 0.92
DDR1-246ENST00000485023 JARID2Q92833 1246 aaPredicted RBP20.77■□□□□ 0.92
DDR1-246ENST00000485023 NLRP3Q96P20 1036 aa20.77■□□□□ 0.92
DDR1-246ENST00000485023 SLC10A5Q5PT55 438 aa20.76■□□□□ 0.91
DDR1-246ENST00000485023 C9orf131Q5VYM1 1079 aa20.76■□□□□ 0.91
DDR1-246ENST00000485023 ZNF526Q8TF50 670 aaPredicted RBP20.76■□□□□ 0.91
DDR1-246ENST00000485023 NFKBIEO00221 500 aa20.75■□□□□ 0.91
DDR1-246ENST00000485023 CWF19L2Q2TBE0 894 aaKnown RBP20.75■□□□□ 0.91
DDR1-246ENST00000485023 SLC51AQ86UW1 340 aa20.75■□□□□ 0.91
DDR1-246ENST00000485023 RBM17Q96I25 401 aaKnown RBP20.75■□□□□ 0.91
DDR1-246ENST00000485023 CWC25Q9NXE8 425 aaPredicted RBP20.75■□□□□ 0.91
DDR1-246ENST00000485023 RNF181Q9P0P0 153 aa20.75■□□□□ 0.91
DDR1-246ENST00000485023 DDX60Q8IY21 1712 aaKnown RBP20.75■□□□□ 0.91
DDR1-246ENST00000485023 LAMB2P55268 1798 aa20.74■□□□□ 0.91
DDR1-246ENST00000485023 ALDH1B1P30837 517 aa20.74■□□□□ 0.91
DDR1-246ENST00000485023 NEXNQ0ZGT2 675 aa20.74■□□□□ 0.91
DDR1-246ENST00000485023 TRIM28Q13263 835 aaKnown RBP20.74■□□□□ 0.91
DDR1-246ENST00000485023 F6X3S4 739 aa20.73■□□□□ 0.91
DDR1-246ENST00000485023 IRS4O14654 1257 aaPredicted RBP20.73■□□□□ 0.91
DDR1-246ENST00000485023 IGKV5-2P06315 115 aa20.73■□□□□ 0.91
DDR1-246ENST00000485023 PRELPP51888 382 aa20.73■□□□□ 0.91
DDR1-246ENST00000485023 CCDC191Q8NCU4 936 aa20.73■□□□□ 0.91
DDR1-246ENST00000485023 CCDC93Q567U6 631 aa20.72■□□□□ 0.91
DDR1-246ENST00000485023 DNAAF4Q8WXU2 420 aa20.72■□□□□ 0.91
DDR1-246ENST00000485023 BCL2L13Q9BXK5 485 aa20.72■□□□□ 0.91
DDR1-246ENST00000485023 ABCC4O15439 1325 aa20.72■□□□□ 0.91
DDR1-246ENST00000485023 PPEF1O14829 653 aaPredicted RBP20.71■□□□□ 0.91
DDR1-246ENST00000485023 HOXA10P31260 410 aaPredicted RBP20.71■□□□□ 0.91
DDR1-246ENST00000485023 ZBTB38Q8NAP3 1195 aaPredicted RBP20.71■□□□□ 0.91
DDR1-246ENST00000485023 C7orf43Q8WVR3 580 aa20.71■□□□□ 0.91
DDR1-246ENST00000485023 TAOK3Q9H2K8 898 aa20.71■□□□□ 0.91
DDR1-246ENST00000485023 NEURL1BA8MQ27 555 aa20.7■□□□□ 0.9
DDR1-246ENST00000485023 SOGA3Q5TF21 947 aa20.7■□□□□ 0.9
DDR1-246ENST00000485023 TRMT2AQ8IZ69 625 aaKnown RBP20.7■□□□□ 0.9
DDR1-246ENST00000485023 CRAMP1Q96RY5 1269 aa20.7■□□□□ 0.9
DDR1-246ENST00000485023 PCCAP05165 728 aaPredicted RBP20.69■□□□□ 0.9
DDR1-246ENST00000485023 LMNB1P20700 586 aa20.69■□□□□ 0.9
DDR1-246ENST00000485023 DDX46Q7L014 1031 aaKnown RBP20.69■□□□□ 0.9
DDR1-246ENST00000485023 SSH1Q8WYL5 1049 aa20.69■□□□□ 0.9
DDR1-246ENST00000485023 MRPL50Q8N5N7 158 aaKnown RBP20.68■□□□□ 0.9
DDR1-246ENST00000485023 CCDC85AQ96PX6 553 aaPredicted RBP20.68■□□□□ 0.9
DDR1-246ENST00000485023 FER1L6Q2WGJ9 1857 aa20.68■□□□□ 0.9
DDR1-246ENST00000485023 SLC4A10Q6U841 1118 aa20.67■□□□□ 0.9
DDR1-246ENST00000485023 TIAM2Q8IVF5 1701 aa20.67■□□□□ 0.9
DDR1-246ENST00000485023 UBE3BQ7Z3V4 1068 aa20.66■□□□□ 0.9
DDR1-246ENST00000485023 GPBP1L1Q9HC44 474 aaPredicted RBP20.66■□□□□ 0.9
DDR1-246ENST00000485023 SMC4Q9NTJ3 1288 aa20.66■□□□□ 0.9
DDR1-246ENST00000485023 COL4A1P02462 1669 aa20.66■□□□□ 0.9
DDR1-246ENST00000485023 SBF1O95248 1867 aa20.66■□□□□ 0.9
DDR1-246ENST00000485023 C1QTNF8P60827 252 aa20.65■□□□□ 0.9
DDR1-246ENST00000485023 FKBP4Q02790 459 aaKnown RBP eCLIP20.65■□□□□ 0.9
DDR1-246ENST00000485023 GRAPQ13588 217 aa20.65■□□□□ 0.9
DDR1-246ENST00000485023 GCKRQ14397 625 aa20.65■□□□□ 0.9
DDR1-246ENST00000485023 SF3B3Q15393 1217 aaKnown RBP20.65■□□□□ 0.9
DDR1-246ENST00000485023 LINS1Q8NG48 757 aa20.65■□□□□ 0.9
DDR1-246ENST00000485023 GRAPLQ8TC17 118 aaPredicted RBP20.65■□□□□ 0.9
DDR1-246ENST00000485023 ZNF277Q9NRM2 450 aaPredicted RBP20.65■□□□□ 0.9
DDR1-246ENST00000485023 CACNA1FO60840 1977 aa20.65■□□□□ 0.9
DDR1-246ENST00000485023 CDHR2Q9BYE9 1310 aa20.64■□□□□ 0.89
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms