RNA–Protein interactions for RNA: ENST00000484886.1

SNX17-206, Transcript of sorting nexin 17, humanhuman

TSL 2

Gene SNX17, Length 568 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX17-206ENST00000484886 NLRP10Q86W26 655 aa24.57■■□□□ 1.52
SNX17-206ENST00000484886 CNKSR1Q969H4 720 aa24.57■■□□□ 1.52
SNX17-206ENST00000484886 CACNA1SQ13698 1873 aa24.57■■□□□ 1.52
SNX17-206ENST00000484886 TNRC6CQ9HCJ0 1690 aaKnown RBP24.56■■□□□ 1.52
SNX17-206ENST00000484886 ATP5J2-PTCD1G3V325 749 aa24.56■■□□□ 1.52
SNX17-206ENST00000484886 SLC4A2P04920 1241 aa24.56■■□□□ 1.52
SNX17-206ENST00000484886 NPR1P16066 1061 aa24.56■■□□□ 1.52
SNX17-206ENST00000484886 TRMT112Q9UI30 125 aaKnown RBP24.56■■□□□ 1.52
SNX17-206ENST00000484886 VAMP4O75379 141 aa24.55■■□□□ 1.52
SNX17-206ENST00000484886 E9PSI1 815 aa24.54■■□□□ 1.52
SNX17-206ENST00000484886 PRPF40BQ6NWY9 871 aaKnown RBP24.53■■□□□ 1.52
SNX17-206ENST00000484886 RPGRQ92834 1020 aaKnown RBP24.53■■□□□ 1.52
SNX17-206ENST00000484886 MYD88Q99836 296 aa24.53■■□□□ 1.52
SNX17-206ENST00000484886 RNF123Q5XPI4 1314 aa24.53■■□□□ 1.52
SNX17-206ENST00000484886 KLRG2A4D1S0 409 aaPredicted RBP24.52■■□□□ 1.52
SNX17-206ENST00000484886 MAP3K2Q9Y2U5 619 aa24.52■■□□□ 1.52
SNX17-206ENST00000484886 C21orf2O43822 256 aa24.51■■□□□ 1.51
SNX17-206ENST00000484886 G2E3Q7L622 706 aa24.51■■□□□ 1.51
SNX17-206ENST00000484886 NLRP3Q96P20 1036 aa24.51■■□□□ 1.51
SNX17-206ENST00000484886 ISCA1Q9BUE6 129 aa24.51■■□□□ 1.51
SNX17-206ENST00000484886 SH3TC1Q8TE82 1336 aa24.51■■□□□ 1.51
SNX17-206ENST00000484886 RIC1Q4ADV7 1423 aa24.51■■□□□ 1.51
SNX17-206ENST00000484886 SLX4Q8IY92 1834 aa24.5■■□□□ 1.51
SNX17-206ENST00000484886 KSR2Q6VAB6 950 aa24.5■■□□□ 1.51
SNX17-206ENST00000484886 PI4KAP2A4QPH2 592 aa24.49■■□□□ 1.51
SNX17-206ENST00000484886 HCLS1P14317 486 aaPredicted RBP24.49■■□□□ 1.51
SNX17-206ENST00000484886 ALDH1B1P30837 517 aa24.49■■□□□ 1.51
SNX17-206ENST00000484886 SYNE4Q8N205 404 aa24.49■■□□□ 1.51
SNX17-206ENST00000484886 PI4KAP1Q8N8J0 262 aa24.49■■□□□ 1.51
SNX17-206ENST00000484886 ZNF784Q8NCA9 323 aaPredicted RBP24.49■■□□□ 1.51
SNX17-206ENST00000484886 METTL22Q9BUU2 404 aaPredicted RBP24.49■■□□□ 1.51
SNX17-206ENST00000484886 RASSF7Q02833 373 aa24.48■■□□□ 1.51
SNX17-206ENST00000484886 SLFN5Q08AF3 891 aa24.48■■□□□ 1.51
SNX17-206ENST00000484886 FLIIQ13045 1269 aa24.48■■□□□ 1.51
SNX17-206ENST00000484886 FKBP5Q13451 457 aaPredicted RBP24.48■■□□□ 1.51
SNX17-206ENST00000484886 CRY2Q49AN0 593 aa24.48■■□□□ 1.51
SNX17-206ENST00000484886 RTL5Q5HYW3 569 aaPredicted RBP24.48■■□□□ 1.51
SNX17-206ENST00000484886 CDCA7LQ96GN5 454 aa24.48■■□□□ 1.51
SNX17-206ENST00000484886 RBM17Q96I25 401 aaKnown RBP24.48■■□□□ 1.51
SNX17-206ENST00000484886 CACNA1FO60840 1977 aa24.47■■□□□ 1.51
SNX17-206ENST00000484886 NEXNQ0ZGT2 675 aa24.47■■□□□ 1.51
SNX17-206ENST00000484886 SLC10A5Q5PT55 438 aa24.47■■□□□ 1.51
SNX17-206ENST00000484886 C3orf67Q6ZVT6 689 aa24.47■■□□□ 1.51
SNX17-206ENST00000484886 FAM89AQ96GI7 184 aa24.47■■□□□ 1.51
SNX17-206ENST00000484886 ADCY9O60503 1353 aa24.46■■□□□ 1.51
SNX17-206ENST00000484886 TRIM28Q13263 835 aaKnown RBP24.46■■□□□ 1.51
SNX17-206ENST00000484886 SOGA3Q5TF21 947 aa24.46■■□□□ 1.51
SNX17-206ENST00000484886 C9orf131Q5VYM1 1079 aa24.46■■□□□ 1.51
SNX17-206ENST00000484886 RNF181Q9P0P0 153 aa24.46■■□□□ 1.51
SNX17-206ENST00000484886 CWC25Q9NXE8 425 aaPredicted RBP24.45■■□□□ 1.5
SNX17-206ENST00000484886 CCDC191Q8NCU4 936 aa24.44■■□□□ 1.5
SNX17-206ENST00000484886 LAMB2P55268 1798 aa24.44■■□□□ 1.5
SNX17-206ENST00000484886 HNRNPUQ00839 825 aaKnown RBP eCLIP24.43■■□□□ 1.5
SNX17-206ENST00000484886 ZNF526Q8TF50 670 aaPredicted RBP24.43■■□□□ 1.5
SNX17-206ENST00000484886 NFKBIEO00221 500 aa24.42■■□□□ 1.5
SNX17-206ENST00000484886 IRS4O14654 1257 aaPredicted RBP24.42■■□□□ 1.5
SNX17-206ENST00000484886 HOXA10P31260 410 aaPredicted RBP24.42■■□□□ 1.5
SNX17-206ENST00000484886 CCDC93Q567U6 631 aa24.42■■□□□ 1.5
SNX17-206ENST00000484886 DDX60Q8IY21 1712 aaKnown RBP24.41■■□□□ 1.5
SNX17-206ENST00000484886 LMNB1P20700 586 aa24.41■■□□□ 1.5
SNX17-206ENST00000484886 ZBTB38Q8NAP3 1195 aaPredicted RBP24.41■■□□□ 1.5
SNX17-206ENST00000484886 DNAAF4Q8WXU2 420 aa24.41■■□□□ 1.5
SNX17-206ENST00000484886 CRAMP1Q96RY5 1269 aa24.41■■□□□ 1.5
SNX17-206ENST00000484886 TAOK3Q9H2K8 898 aa24.41■■□□□ 1.5
SNX17-206ENST00000484886 SBF1O95248 1867 aa24.41■■□□□ 1.5
SNX17-206ENST00000484886 HSP90B1P14625 803 aaKnown RBP24.4■■□□□ 1.5
SNX17-206ENST00000484886 CWF19L2Q2TBE0 894 aaKnown RBP24.4■■□□□ 1.5
SNX17-206ENST00000484886 DDX46Q7L014 1031 aaKnown RBP24.4■■□□□ 1.5
SNX17-206ENST00000484886 JARID2Q92833 1246 aaPredicted RBP24.4■■□□□ 1.5
SNX17-206ENST00000484886 FER1L6Q2WGJ9 1857 aa24.4■■□□□ 1.5
SNX17-206ENST00000484886 PPEF1O14829 653 aaPredicted RBP24.39■■□□□ 1.49
SNX17-206ENST00000484886 PCCAP05165 728 aaPredicted RBP24.39■■□□□ 1.49
SNX17-206ENST00000484886 IGKV5-2P06315 115 aa24.39■■□□□ 1.49
SNX17-206ENST00000484886 OLFM4Q6UX06 510 aa24.39■■□□□ 1.49
SNX17-206ENST00000484886 TMX4Q9H1E5 349 aaPredicted RBP24.39■■□□□ 1.49
SNX17-206ENST00000484886 C7orf43Q8WVR3 580 aa24.38■■□□□ 1.49
SNX17-206ENST00000484886 CCDC88AQ3V6T2 1871 aa24.38■■□□□ 1.49
SNX17-206ENST00000484886 ABCC4O15439 1325 aa24.37■■□□□ 1.49
SNX17-206ENST00000484886 NEURL1BA8MQ27 555 aa24.37■■□□□ 1.49
SNX17-206ENST00000484886 F6X3S4 739 aa24.37■■□□□ 1.49
SNX17-206ENST00000484886 RTKN2Q8IZC4 609 aa24.37■■□□□ 1.49
SNX17-206ENST00000484886 GPBP1L1Q9HC44 474 aaPredicted RBP24.37■■□□□ 1.49
SNX17-206ENST00000484886 TRMT2AQ8IZ69 625 aaKnown RBP24.36■■□□□ 1.49
SNX17-206ENST00000484886 LTBP3Q9NS15 1303 aa24.35■■□□□ 1.49
SNX17-206ENST00000484886 BCL2L13Q9BXK5 485 aa24.35■■□□□ 1.49
SNX17-206ENST00000484886 PRELPP51888 382 aa24.34■■□□□ 1.49
SNX17-206ENST00000484886 CC2D2BQ6DHV5 1058 aa24.34■■□□□ 1.49
SNX17-206ENST00000484886 MRPL50Q8N5N7 158 aaKnown RBP24.34■■□□□ 1.49
SNX17-206ENST00000484886 LINS1Q8NG48 757 aa24.34■■□□□ 1.49
SNX17-206ENST00000484886 TIAM2Q8IVF5 1701 aa24.33■■□□□ 1.49
SNX17-206ENST00000484886 PDE8AO60658 829 aa24.33■■□□□ 1.49
SNX17-206ENST00000484886 FKBP4Q02790 459 aaKnown RBP eCLIP24.33■■□□□ 1.49
SNX17-206ENST00000484886 GRAPQ13588 217 aa24.33■■□□□ 1.49
SNX17-206ENST00000484886 SF3B3Q15393 1217 aaKnown RBP24.33■■□□□ 1.49
SNX17-206ENST00000484886 SLC4A10Q6U841 1118 aa24.33■■□□□ 1.49
SNX17-206ENST00000484886 UBE3BQ7Z3V4 1068 aa24.33■■□□□ 1.49
SNX17-206ENST00000484886 GRAPLQ8TC17 118 aaPredicted RBP24.33■■□□□ 1.49
SNX17-206ENST00000484886 SSH1Q8WYL5 1049 aa24.33■■□□□ 1.49
SNX17-206ENST00000484886 BBOX1O75936 387 aa24.32■■□□□ 1.48
SNX17-206ENST00000484886 GCKRQ14397 625 aa24.32■■□□□ 1.48
Retrieved 100 of 20,778 RNA–protein pairs in 14.8 ms