RNA–Protein interactions for RNA: ENST00000484799.1

SMC4-215, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 2

Gene SMC4, Length 478 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-215ENST00000484799 KLF15Q9UIH9 416 aa8.53□□□□□ -1.04
SMC4-215ENST00000484799 RAB44Q7Z6P3 723 aaPredicted RBP8.52□□□□□ -1.05
SMC4-215ENST00000484799 UBE2OQ9C0C9 1292 aaKnown RBP8.52□□□□□ -1.05
SMC4-215ENST00000484799 KCNQ4P56696 695 aa8.51□□□□□ -1.05
SMC4-215ENST00000484799 TYRO3Q06418 890 aa8.51□□□□□ -1.05
SMC4-215ENST00000484799 DGKZQ13574 1117 aa8.51□□□□□ -1.05
SMC4-215ENST00000484799 C11orf91Q3C1V1 193 aa8.51□□□□□ -1.05
SMC4-215ENST00000484799 ARXQ96QS3 562 aa8.51□□□□□ -1.05
SMC4-215ENST00000484799 EFCC1Q9HA90 598 aa8.51□□□□□ -1.05
SMC4-215ENST00000484799 TGFBR3LH3BV60 316 aa8.5□□□□□ -1.05
SMC4-215ENST00000484799 WEE1P30291 646 aa8.5□□□□□ -1.05
SMC4-215ENST00000484799 CCINQ13939 588 aa8.5□□□□□ -1.05
SMC4-215ENST00000484799 PLA2G4EQ3MJ16 856 aa8.5□□□□□ -1.05
SMC4-215ENST00000484799 IER5Q5VY09 327 aa8.5□□□□□ -1.05
SMC4-215ENST00000484799 LINC00114Q6XXX2 140 aa8.5□□□□□ -1.05
SMC4-215ENST00000484799 PRIMPOLQ96LW4 560 aa8.5□□□□□ -1.05
SMC4-215ENST00000484799 KLK14Q9P0G3 267 aa8.5□□□□□ -1.05
SMC4-215ENST00000484799 ADARB2-AS1A8MUL3 147 aa8.49□□□□□ -1.05
SMC4-215ENST00000484799 PRMT3O60678 531 aa8.49□□□□□ -1.05
SMC4-215ENST00000484799 ARID4AP29374 1257 aaPredicted RBP8.49□□□□□ -1.05
SMC4-215ENST00000484799 SWI5Q1ZZU3 235 aa8.49□□□□□ -1.05
SMC4-215ENST00000484799 PRRT3Q5FWE3 981 aa8.49□□□□□ -1.05
SMC4-215ENST00000484799 PLVAPQ9BX97 442 aa8.49□□□□□ -1.05
SMC4-215ENST00000484799 HCN2Q9UL51 889 aa8.49□□□□□ -1.05
SMC4-215ENST00000484799 ACIN1Q9UKV3 1341 aaKnown RBP8.49□□□□□ -1.05
SMC4-215ENST00000484799 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP8.48□□□□□ -1.05
SMC4-215ENST00000484799 ADH7P40394 386 aa8.48□□□□□ -1.05
SMC4-215ENST00000484799 DGKGP49619 791 aa8.48□□□□□ -1.05
SMC4-215ENST00000484799 PCSK7Q16549 785 aa8.48□□□□□ -1.05
SMC4-215ENST00000484799 TNFRSF25Q93038 417 aa8.48□□□□□ -1.05
SMC4-215ENST00000484799 IFT43Q96FT9 208 aa8.48□□□□□ -1.05
SMC4-215ENST00000484799 GTF3C5Q9Y5Q8 519 aaPredicted RBP8.48□□□□□ -1.05
SMC4-215ENST00000484799 M0R082 166 aa8.47□□□□□ -1.05
SMC4-215ENST00000484799 MICAL2O94851 1124 aa8.47□□□□□ -1.05
SMC4-215ENST00000484799 IDH3AP50213 366 aa8.47□□□□□ -1.05
SMC4-215ENST00000484799 ARSDP51689 593 aa8.47□□□□□ -1.05
SMC4-215ENST00000484799 ELOAQ14241 798 aaKnown RBP8.47□□□□□ -1.05
SMC4-215ENST00000484799 ZNF417Q8TAU3 575 aa8.47□□□□□ -1.05
SMC4-215ENST00000484799 ZNF587Q96SQ5 575 aaPredicted RBP8.47□□□□□ -1.05
SMC4-215ENST00000484799 SUV39H2Q9H5I1 410 aa8.47□□□□□ -1.05
SMC4-215ENST00000484799 TRIM28Q13263 835 aaKnown RBP8.46□□□□□ -1.06
SMC4-215ENST00000484799 PBXIP1Q96AQ6 731 aa8.46□□□□□ -1.06
SMC4-215ENST00000484799 ARID3CA6NKF2 412 aa8.45□□□□□ -1.06
SMC4-215ENST00000484799 LILRB5O75023 590 aa8.45□□□□□ -1.06
SMC4-215ENST00000484799 ATG7O95352 703 aa8.45□□□□□ -1.06
SMC4-215ENST00000484799 APBA3O96018 575 aa8.45□□□□□ -1.06
SMC4-215ENST00000484799 TRAPPC3LQ5T215 181 aa8.45□□□□□ -1.06
SMC4-215ENST00000484799 KRT25Q7Z3Z0 450 aa8.45□□□□□ -1.06
SMC4-215ENST00000484799 C14orf37Q86TY3 774 aa8.45□□□□□ -1.06
SMC4-215ENST00000484799 GSX2Q9BZM3 304 aa8.45□□□□□ -1.06
SMC4-215ENST00000484799 KRBA1A5PL33 1030 aa8.44□□□□□ -1.06
SMC4-215ENST00000484799 NFKB1P19838 968 aa8.44□□□□□ -1.06
SMC4-215ENST00000484799 BRD2P25440 801 aaKnown RBP8.44□□□□□ -1.06
SMC4-215ENST00000484799 CMTR1Q8N1G2 835 aaKnown RBP8.44□□□□□ -1.06
SMC4-215ENST00000484799 QTRT2Q9H974 415 aaKnown RBP8.44□□□□□ -1.06
SMC4-215ENST00000484799 PTCD1O75127 700 aaKnown RBP8.43□□□□□ -1.06
SMC4-215ENST00000484799 COL8A1P27658 744 aa8.43□□□□□ -1.06
SMC4-215ENST00000484799 MYO19Q96H55 970 aa8.43□□□□□ -1.06
SMC4-215ENST00000484799 SPOCK3Q9BQ16 436 aa8.43□□□□□ -1.06
SMC4-215ENST00000484799 FAM13BQ9NYF5 915 aa8.43□□□□□ -1.06
SMC4-215ENST00000484799 RGS9O75916 674 aaPredicted RBP8.42□□□□□ -1.06
SMC4-215ENST00000484799 SPATA31C1P0DKV0 1188 aa8.42□□□□□ -1.06
SMC4-215ENST00000484799 HOXB4P17483 251 aaPredicted RBP8.42□□□□□ -1.06
SMC4-215ENST00000484799 INPP5BP32019 993 aa8.42□□□□□ -1.06
SMC4-215ENST00000484799 FKBP5Q13451 457 aaPredicted RBP8.42□□□□□ -1.06
SMC4-215ENST00000484799 C16orf46Q6P387 395 aa8.42□□□□□ -1.06
SMC4-215ENST00000484799 MICALL1Q8N3F8 863 aa8.42□□□□□ -1.06
SMC4-215ENST00000484799 STK32AQ8WU08 396 aa8.42□□□□□ -1.06
SMC4-215ENST00000484799 NUDT8Q8WV74 236 aa8.42□□□□□ -1.06
SMC4-215ENST00000484799 JPH1Q9HDC5 661 aaPredicted RBP8.42□□□□□ -1.06
SMC4-215ENST00000484799 C11orf16Q9NQ32 467 aa8.42□□□□□ -1.06
SMC4-215ENST00000484799 BCS1LQ9Y276 419 aa8.42□□□□□ -1.06
SMC4-215ENST00000484799 SASH3O75995 380 aa8.41□□□□□ -1.06
SMC4-215ENST00000484799 RARAP10276 462 aa8.41□□□□□ -1.06
SMC4-215ENST00000484799 TREML1Q86YW5 311 aa8.41□□□□□ -1.06
SMC4-215ENST00000484799 RGL4Q8IZJ4 473 aa8.41□□□□□ -1.06
SMC4-215ENST00000484799 MKNK1Q9BUB5 465 aa8.41□□□□□ -1.06
SMC4-215ENST00000484799 DNAJB12Q9NXW2 375 aaKnown RBP8.41□□□□□ -1.06
SMC4-215ENST00000484799 SLC6A14Q9UN76 642 aa8.41□□□□□ -1.06
SMC4-215ENST00000484799 RTCBQ9Y3I0 505 aaKnown RBP8.41□□□□□ -1.06
SMC4-215ENST00000484799 NAA30Q147X3 362 aaPredicted RBP8.4□□□□□ -1.06
SMC4-215ENST00000484799 COX20Q5RI15 118 aa8.4□□□□□ -1.06
SMC4-215ENST00000484799 FAM35AQ86V20 835 aa8.4□□□□□ -1.06
SMC4-215ENST00000484799 TRIM11Q96F44 468 aa8.4□□□□□ -1.06
SMC4-215ENST00000484799 NACC1Q96RE7 527 aa8.4□□□□□ -1.06
SMC4-215ENST00000484799 DMGDHQ9UI17 866 aaKnown RBP8.4□□□□□ -1.06
SMC4-215ENST00000484799 ZMIZ1Q9ULJ6 1067 aa8.4□□□□□ -1.06
SMC4-215ENST00000484799 C1QTNF9BB2RNN3 333 aa8.39□□□□□ -1.07
SMC4-215ENST00000484799 XYLBO75191 536 aa8.39□□□□□ -1.07
SMC4-215ENST00000484799 ALBP02768 609 aa8.39□□□□□ -1.07
SMC4-215ENST00000484799 TARSP26639 723 aaKnown RBP8.39□□□□□ -1.07
SMC4-215ENST00000484799 RAC1P63000 192 aa8.39□□□□□ -1.07
SMC4-215ENST00000484799 TMEM164Q5U3C3 297 aa8.39□□□□□ -1.07
SMC4-215ENST00000484799 ELMSAN1Q6PJG2 1045 aa8.39□□□□□ -1.07
SMC4-215ENST00000484799 TTC16Q8NEE8 873 aa8.39□□□□□ -1.07
SMC4-215ENST00000484799 PIK3R5Q8WYR1 880 aa8.39□□□□□ -1.07
SMC4-215ENST00000484799 CPB1P15086 417 aa8.38□□□□□ -1.07
SMC4-215ENST00000484799 SUZ12Q15022 739 aaKnown RBP8.38□□□□□ -1.07
SMC4-215ENST00000484799 PSAPL1Q6NUJ1 521 aa8.38□□□□□ -1.07
SMC4-215ENST00000484799 C8orf86Q6ZUL3 223 aa8.38□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 19.4 ms