RNA–Protein interactions for RNA: ENST00000484574.1

POLR1B-213, Transcript of RNA polymerase I subunit B, humanhuman

TSL 2

Gene POLR1B, Length 551 nt, Biotype retained intron, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLR1B-213ENST00000484574 NECTIN2Q92692 538 aa15.48■□□□□ 0.07
POLR1B-213ENST00000484574 NLRP3Q96P20 1036 aa15.48■□□□□ 0.07
POLR1B-213ENST00000484574 CRAMP1Q96RY5 1269 aa15.48■□□□□ 0.07
POLR1B-213ENST00000484574 RNF181Q9P0P0 153 aa15.48■□□□□ 0.07
POLR1B-213ENST00000484574 SLX4Q8IY92 1834 aa15.47■□□□□ 0.07
POLR1B-213ENST00000484574 KDM2BQ8NHM5 1336 aa15.47■□□□□ 0.07
POLR1B-213ENST00000484574 C21orf2O43822 256 aa15.47■□□□□ 0.07
POLR1B-213ENST00000484574 DDX58O95786 925 aaKnown RBP15.47■□□□□ 0.07
POLR1B-213ENST00000484574 C1QTNF8P60827 252 aa15.47■□□□□ 0.07
POLR1B-213ENST00000484574 RBM17Q96I25 401 aaKnown RBP15.47■□□□□ 0.07
POLR1B-213ENST00000484574 CACNA1FO60840 1977 aa15.46■□□□□ 0.07
POLR1B-213ENST00000484574 FAM177BA6PVY3 158 aa15.46■□□□□ 0.07
POLR1B-213ENST00000484574 NFKBIEO00221 500 aa15.46■□□□□ 0.07
POLR1B-213ENST00000484574 GOLGA2Q08379 1002 aa15.46■□□□□ 0.07
POLR1B-213ENST00000484574 CCDC93Q567U6 631 aa15.46■□□□□ 0.07
POLR1B-213ENST00000484574 NUTM1Q86Y26 1132 aa15.46■□□□□ 0.07
POLR1B-213ENST00000484574 RPGRQ92834 1020 aaKnown RBP15.46■□□□□ 0.07
POLR1B-213ENST00000484574 ISCA1Q9BUE6 129 aa15.46■□□□□ 0.07
POLR1B-213ENST00000484574 STK31Q9BXU1 1019 aa15.46■□□□□ 0.07
POLR1B-213ENST00000484574 TAOK3Q9H2K8 898 aa15.46■□□□□ 0.07
POLR1B-213ENST00000484574 SH3TC1Q8TE82 1336 aa15.45■□□□□ 0.06
POLR1B-213ENST00000484574 DICER1Q9UPY3 1922 aaKnown RBP15.45■□□□□ 0.06
POLR1B-213ENST00000484574 CCER2I3L3R5 266 aa15.45■□□□□ 0.06
POLR1B-213ENST00000484574 FAM9BQ8IZU0 186 aa15.45■□□□□ 0.06
POLR1B-213ENST00000484574 MYH16Q9H6N6 1097 aa15.45■□□□□ 0.06
POLR1B-213ENST00000484574 TRMT112Q9UI30 125 aaKnown RBP15.45■□□□□ 0.06
POLR1B-213ENST00000484574 ABCC12Q96J65 1359 aa15.45■□□□□ 0.06
POLR1B-213ENST00000484574 ELL2O00472 640 aaPredicted RBP15.44■□□□□ 0.06
POLR1B-213ENST00000484574 TWISTNBQ3B726 338 aaPredicted RBP15.44■□□□□ 0.06
POLR1B-213ENST00000484574 TMC4Q7Z404 712 aa15.44■□□□□ 0.06
POLR1B-213ENST00000484574 RIC3Q7Z5B4 369 aa15.44■□□□□ 0.06
POLR1B-213ENST00000484574 FKBP4Q02790 459 aaKnown RBP eCLIP15.43■□□□□ 0.06
POLR1B-213ENST00000484574 DPY19L2Q6NUT2 758 aa15.43■□□□□ 0.06
POLR1B-213ENST00000484574 CCDC191Q8NCU4 936 aa15.43■□□□□ 0.06
POLR1B-213ENST00000484574 TSR2Q969E8 191 aaKnown RBP15.43■□□□□ 0.06
POLR1B-213ENST00000484574 PSMD1Q99460 953 aa15.43■□□□□ 0.06
POLR1B-213ENST00000484574 VPS33BQ9H267 617 aa15.43■□□□□ 0.06
POLR1B-213ENST00000484574 TNRC6CQ9HCJ0 1690 aaKnown RBP15.43■□□□□ 0.06
POLR1B-213ENST00000484574 FANCIQ9NVI1 1328 aa15.43■□□□□ 0.06
POLR1B-213ENST00000484574 CCDC88AQ3V6T2 1871 aa15.42■□□□□ 0.06
POLR1B-213ENST00000484574 GLTPD2A6NH11 291 aa15.42■□□□□ 0.06
POLR1B-213ENST00000484574 BBOX1O75936 387 aa15.42■□□□□ 0.06
POLR1B-213ENST00000484574 RASSF7Q02833 373 aa15.42■□□□□ 0.06
POLR1B-213ENST00000484574 TSPYL6Q8N831 410 aa15.42■□□□□ 0.06
POLR1B-213ENST00000484574 TMX4Q9H1E5 349 aaPredicted RBP15.42■□□□□ 0.06
POLR1B-213ENST00000484574 CACNA1SQ13698 1873 aa15.42■□□□□ 0.06
POLR1B-213ENST00000484574 KIF3CO14782 793 aa15.41■□□□□ 0.06
POLR1B-213ENST00000484574 TOMM70O94826 608 aa15.41■□□□□ 0.06
POLR1B-213ENST00000484574 KSR2Q6VAB6 950 aa15.41■□□□□ 0.06
POLR1B-213ENST00000484574 METTL22Q9BUU2 404 aaPredicted RBP15.41■□□□□ 0.06
POLR1B-213ENST00000484574 PHAXQ9H814 394 aaKnown RBP15.41■□□□□ 0.06
POLR1B-213ENST00000484574 ZNF521Q96K83 1311 aa15.41■□□□□ 0.06
POLR1B-213ENST00000484574 PRELPP51888 382 aa15.4■□□□□ 0.06
POLR1B-213ENST00000484574 SF3B3Q15393 1217 aaKnown RBP15.4■□□□□ 0.06
POLR1B-213ENST00000484574 ZBTB38Q8NAP3 1195 aaPredicted RBP15.4■□□□□ 0.06
POLR1B-213ENST00000484574 SNED1Q8TER0 1413 aa15.4■□□□□ 0.06
POLR1B-213ENST00000484574 VAMP4O75379 141 aa15.39■□□□□ 0.05
POLR1B-213ENST00000484574 DDX46Q7L014 1031 aaKnown RBP15.39■□□□□ 0.05
POLR1B-213ENST00000484574 ZNF526Q8TF50 670 aaPredicted RBP15.39■□□□□ 0.05
POLR1B-213ENST00000484574 ATP6V0A2Q9Y487 856 aa15.39■□□□□ 0.05
POLR1B-213ENST00000484574 TIAM2Q8IVF5 1701 aa15.39■□□□□ 0.05
POLR1B-213ENST00000484574 PPEF1O14829 653 aaPredicted RBP15.38■□□□□ 0.05
POLR1B-213ENST00000484574 SLC4A2P04920 1241 aa15.38■□□□□ 0.05
POLR1B-213ENST00000484574 PCCAP05165 728 aaPredicted RBP15.38■□□□□ 0.05
POLR1B-213ENST00000484574 NEXNQ0ZGT2 675 aa15.38■□□□□ 0.05
POLR1B-213ENST00000484574 SP8Q8IXZ3 490 aa15.38■□□□□ 0.05
POLR1B-213ENST00000484574 RBM46Q8TBY0 533 aaKnown RBP15.38■□□□□ 0.05
POLR1B-213ENST00000484574 ZNF219Q9P2Y4 722 aaPredicted RBP15.38■□□□□ 0.05
POLR1B-213ENST00000484574 LAMB2P55268 1798 aa15.37■□□□□ 0.05
POLR1B-213ENST00000484574 ATP5J2-PTCD1G3V325 749 aa15.37■□□□□ 0.05
POLR1B-213ENST00000484574 VEGFAP15692 232 aaPredicted RBP15.37■□□□□ 0.05
POLR1B-213ENST00000484574 GRAPQ13588 217 aa15.37■□□□□ 0.05
POLR1B-213ENST00000484574 SUPT20HQ8NEM7 779 aa15.37■□□□□ 0.05
POLR1B-213ENST00000484574 GRAPLQ8TC17 118 aaPredicted RBP15.37■□□□□ 0.05
POLR1B-213ENST00000484574 ZNF428Q96B54 188 aa15.37■□□□□ 0.05
POLR1B-213ENST00000484574 CWC25Q9NXE8 425 aaPredicted RBP15.37■□□□□ 0.05
POLR1B-213ENST00000484574 WDR90Q96KV7 1748 aa15.37■□□□□ 0.05
POLR1B-213ENST00000484574 PI4KAP2A4QPH2 592 aa15.36■□□□□ 0.05
POLR1B-213ENST00000484574 HCLS1P14317 486 aaPredicted RBP15.36■□□□□ 0.05
POLR1B-213ENST00000484574 EXOSC9Q06265 439 aaKnown RBP15.36■□□□□ 0.05
POLR1B-213ENST00000484574 FSTL1Q12841 308 aa15.36■□□□□ 0.05
POLR1B-213ENST00000484574 C3orf67Q6ZVT6 689 aa15.36■□□□□ 0.05
POLR1B-213ENST00000484574 C16orf71Q8IYS4 520 aaPredicted RBP15.36■□□□□ 0.05
POLR1B-213ENST00000484574 SYNE4Q8N205 404 aa15.36■□□□□ 0.05
POLR1B-213ENST00000484574 PI4KAP1Q8N8J0 262 aa15.36■□□□□ 0.05
POLR1B-213ENST00000484574 FAM89AQ96GI7 184 aa15.36■□□□□ 0.05
POLR1B-213ENST00000484574 MYD88Q99836 296 aa15.36■□□□□ 0.05
POLR1B-213ENST00000484574 RTFDC1Q9BY42 306 aaPredicted RBP15.36■□□□□ 0.05
POLR1B-213ENST00000484574 NMRK2Q9NPI5 230 aa15.36■□□□□ 0.05
POLR1B-213ENST00000484574 MAP3K2Q9Y2U5 619 aa15.36■□□□□ 0.05
POLR1B-213ENST00000484574 DDX60Q8IY21 1712 aaKnown RBP15.36■□□□□ 0.05
POLR1B-213ENST00000484574 ABCC4O15439 1325 aa15.36■□□□□ 0.05
POLR1B-213ENST00000484574 CDHR2Q9BYE9 1310 aa15.36■□□□□ 0.05
POLR1B-213ENST00000484574 E9PSI1 815 aa15.35■□□□□ 0.05
POLR1B-213ENST00000484574 IRS4O14654 1257 aaPredicted RBP15.35■□□□□ 0.05
POLR1B-213ENST00000484574 IARSP41252 1262 aaKnown RBP15.35■□□□□ 0.05
POLR1B-213ENST00000484574 FLIIQ13045 1269 aa15.35■□□□□ 0.05
POLR1B-213ENST00000484574 JDP2Q8WYK2 163 aa15.35■□□□□ 0.05
POLR1B-213ENST00000484574 SALL2Q9Y467 1007 aaPredicted RBP15.35■□□□□ 0.05
POLR1B-213ENST00000484574 FZD9O00144 591 aa15.34■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 56.5 ms