RNA–Protein interactions for RNA: ENST00000484552.5

CAST-210, Transcript of calpastatin, humanhuman

TSL 1 (best)

Gene CAST, Length 1,767 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAST-210ENST00000484552 SAMD14Q8IZD0 417 aaPredicted RBP9.7□□□□□ -0.86
CAST-210ENST00000484552 IQCGQ9H095 443 aaKnown RBP9.7□□□□□ -0.86
CAST-210ENST00000484552 EIF4ENIF1Q9NRA8 985 aaKnown RBP9.7□□□□□ -0.86
CAST-210ENST00000484552 CLIC5Q9NZA1 410 aa9.7□□□□□ -0.86
CAST-210ENST00000484552 PDGFRBP09619 1106 aa9.69□□□□□ -0.86
CAST-210ENST00000484552 C7P10643 843 aa9.69□□□□□ -0.86
CAST-210ENST00000484552 KIF2CQ99661 725 aa9.69□□□□□ -0.86
CAST-210ENST00000484552 TSPY26PQ9H489 355 aa9.69□□□□□ -0.86
CAST-210ENST00000484552 CTTNBP2Q8WZ74 1663 aa9.69□□□□□ -0.86
CAST-210ENST00000484552 CCDC163A0A0D9SF12 145 aa9.68□□□□□ -0.86
CAST-210ENST00000484552 ATP2B1P20020 1258 aa9.68□□□□□ -0.86
CAST-210ENST00000484552 TSPAN7P41732 249 aa9.68□□□□□ -0.86
CAST-210ENST00000484552 GTF2A1P52655 376 aaPredicted RBP9.68□□□□□ -0.86
CAST-210ENST00000484552 DDB1Q16531 1140 aa9.68□□□□□ -0.86
CAST-210ENST00000484552 FXNQ16595 210 aa9.68□□□□□ -0.86
CAST-210ENST00000484552 FAM161AQ3B820 660 aa9.68□□□□□ -0.86
CAST-210ENST00000484552 DNAJC21Q5F1R6 531 aaKnown RBP9.68□□□□□ -0.86
CAST-210ENST00000484552 ARL6IP6Q8N6S5 226 aa9.68□□□□□ -0.86
CAST-210ENST00000484552 MMTAG2Q9BU76 263 aaKnown RBP9.68□□□□□ -0.86
CAST-210ENST00000484552 PCDHGA4Q9Y5G9 962 aa9.68□□□□□ -0.86
CAST-210ENST00000484552 SETD1BQ9UPS6 1966 aaKnown RBP9.68□□□□□ -0.86
CAST-210ENST00000484552 EPRSP07814 1512 aaKnown RBP9.68□□□□□ -0.86
CAST-210ENST00000484552 RAD50Q92878 1312 aa9.68□□□□□ -0.86
CAST-210ENST00000484552 CCDC66A2RUB6 948 aa9.68□□□□□ -0.86
CAST-210ENST00000484552 TBX3O15119 743 aa9.68□□□□□ -0.86
CAST-210ENST00000484552 GNALP38405 381 aa9.68□□□□□ -0.86
CAST-210ENST00000484552 TRAPPC10P48553 1259 aa9.68□□□□□ -0.86
CAST-210ENST00000484552 ZSCAN26Q16670 478 aa9.68□□□□□ -0.86
CAST-210ENST00000484552 ODR4Q5SWX8 454 aa9.68□□□□□ -0.86
CAST-210ENST00000484552 ANKRD45Q5TZF3 282 aa9.68□□□□□ -0.86
CAST-210ENST00000484552 NLRP13Q86W25 1043 aa9.68□□□□□ -0.86
CAST-210ENST00000484552 PARP9Q8IXQ6 854 aa9.68□□□□□ -0.86
CAST-210ENST00000484552 GAS2L2Q8NHY3 880 aa9.68□□□□□ -0.86
CAST-210ENST00000484552 CDK5RAP3Q96JB5 506 aa9.68□□□□□ -0.86
CAST-210ENST00000484552 RNPC3Q96LT9 517 aaKnown RBP9.68□□□□□ -0.86
CAST-210ENST00000484552 RMDN2Q96LZ7 410 aa9.68□□□□□ -0.86
CAST-210ENST00000484552 APBA2Q99767 749 aa9.68□□□□□ -0.86
CAST-210ENST00000484552 TRIM6Q9C030 488 aaPredicted RBP9.68□□□□□ -0.86
CAST-210ENST00000484552 GINM1Q9NU53 330 aa9.68□□□□□ -0.86
CAST-210ENST00000484552 RABL2AQ9UBK7 228 aaPredicted RBP9.68□□□□□ -0.86
CAST-210ENST00000484552 HDAC9Q9UKV0 1011 aa9.68□□□□□ -0.86
CAST-210ENST00000484552 ITM2BQ9Y287 266 aa9.68□□□□□ -0.86
CAST-210ENST00000484552 ZCCHC11Q5TAX3 1644 aaKnown RBP9.67□□□□□ -0.86
CAST-210ENST00000484552 A0A1W2PRQ8 180 aa9.67□□□□□ -0.86
CAST-210ENST00000484552 PLIN1O60240 522 aa9.67□□□□□ -0.86
CAST-210ENST00000484552 OATP04181 439 aa9.67□□□□□ -0.86
CAST-210ENST00000484552 HOXD10P28358 340 aa9.67□□□□□ -0.86
CAST-210ENST00000484552 CDC37L1Q7L3B6 337 aa9.67□□□□□ -0.86
CAST-210ENST00000484552 BRSK2Q8IWQ3 736 aa9.67□□□□□ -0.86
CAST-210ENST00000484552 FAM184AQ8NB25 1140 aa9.67□□□□□ -0.86
CAST-210ENST00000484552 HELQQ8TDG4 1101 aa9.67□□□□□ -0.86
CAST-210ENST00000484552 DCAF16Q9NXF7 216 aa9.67□□□□□ -0.86
CAST-210ENST00000484552 PPRC1Q5VV67 1664 aaKnown RBP9.67□□□□□ -0.86
CAST-210ENST00000484552 SPDYE2BA6NHP3 402 aa9.66□□□□□ -0.86
CAST-210ENST00000484552 A6NJY4 79 aa9.66□□□□□ -0.86
CAST-210ENST00000484552 TMCO5BA8MYB1 307 aa9.66□□□□□ -0.86
CAST-210ENST00000484552 BBOX1O75936 387 aa9.66□□□□□ -0.86
CAST-210ENST00000484552 HNRNPCP07910 306 aaKnown RBP eCLIP9.66□□□□□ -0.86
CAST-210ENST00000484552 MSL3P1P0C860 447 aa9.66□□□□□ -0.86
CAST-210ENST00000484552 SPDYE6P0CI01 402 aa9.66□□□□□ -0.86
CAST-210ENST00000484552 VCAM1P19320 739 aa9.66□□□□□ -0.86
CAST-210ENST00000484552 MKRN4PQ13434 485 aaPredicted RBP9.66□□□□□ -0.86
CAST-210ENST00000484552 SPDYE2Q495Y8 402 aa9.66□□□□□ -0.86
CAST-210ENST00000484552 CCDC158Q5M9N0 1113 aa9.66□□□□□ -0.86
CAST-210ENST00000484552 SYCP2LQ5T4T6 812 aa9.66□□□□□ -0.86
CAST-210ENST00000484552 KANK4Q5T7N3 995 aaPredicted RBP9.66□□□□□ -0.86
CAST-210ENST00000484552 C9orf131Q5VYM1 1079 aa9.66□□□□□ -0.86
CAST-210ENST00000484552 ARMC3Q5W041 872 aa9.66□□□□□ -0.86
CAST-210ENST00000484552 TEX19Q8NA77 164 aa9.66□□□□□ -0.86
CAST-210ENST00000484552 CCDC191Q8NCU4 936 aa9.66□□□□□ -0.86
CAST-210ENST00000484552 SPDYE1Q8NFV5 336 aaPredicted RBP9.66□□□□□ -0.86
CAST-210ENST00000484552 TMOD4Q9NZQ9 345 aa9.66□□□□□ -0.86
CAST-210ENST00000484552 WDR7Q9Y4E6 1490 aa9.66□□□□□ -0.86
CAST-210ENST00000484552 MAP3K4Q9Y6R4 1608 aa9.65□□□□□ -0.86
CAST-210ENST00000484552 DNAJC6O75061 913 aa9.65□□□□□ -0.86
CAST-210ENST00000484552 PSMA3P25788 255 aa9.65□□□□□ -0.86
CAST-210ENST00000484552 CASP2P42575 452 aa9.65□□□□□ -0.86
CAST-210ENST00000484552 TBC1D22AQ8WUA7 517 aa9.65□□□□□ -0.86
CAST-210ENST00000484552 TSC1Q92574 1164 aa9.65□□□□□ -0.86
CAST-210ENST00000484552 NOL10Q9BSC4 688 aaKnown RBP9.65□□□□□ -0.86
CAST-210ENST00000484552 XPO4Q9C0E2 1151 aaKnown RBP9.65□□□□□ -0.86
CAST-210ENST00000484552 KMT5AQ9NQR1 393 aa9.65□□□□□ -0.86
CAST-210ENST00000484552 MRPL42Q9Y6G3 142 aaKnown RBP9.65□□□□□ -0.86
CAST-210ENST00000484552 ABCA8O94911 1581 aa9.65□□□□□ -0.86
CAST-210ENST00000484552 SPDYE5A6NIY4 337 aa9.65□□□□□ -0.87
CAST-210ENST00000484552 TSPOAP1O95153 1857 aa9.65□□□□□ -0.87
CAST-210ENST00000484552 ECEL1O95672 775 aa9.65□□□□□ -0.87
CAST-210ENST00000484552 EIF2B5Q13144 721 aaKnown RBP9.65□□□□□ -0.87
CAST-210ENST00000484552 JAKMIP3Q5VZ66 844 aa9.65□□□□□ -0.87
CAST-210ENST00000484552 NEK9Q8TD19 979 aa9.65□□□□□ -0.87
CAST-210ENST00000484552 JARID2Q92833 1246 aaPredicted RBP9.65□□□□□ -0.87
CAST-210ENST00000484552 ARMC5Q96C12 935 aa9.65□□□□□ -0.87
CAST-210ENST00000484552 SLC26A8Q96RN1 970 aa9.65□□□□□ -0.87
CAST-210ENST00000484552 XPO7Q9UIA9 1087 aaKnown RBP9.65□□□□□ -0.87
CAST-210ENST00000484552 RABGAP1Q9Y3P9 1069 aa9.65□□□□□ -0.87
CAST-210ENST00000484552 FAM25EA8MYX2 175 aa9.64□□□□□ -0.87
CAST-210ENST00000484552 KCNJ4P48050 445 aa9.64□□□□□ -0.87
CAST-210ENST00000484552 SH3BGRP55822 239 aaPredicted RBP9.64□□□□□ -0.87
CAST-210ENST00000484552 SESN3P58005 492 aa9.64□□□□□ -0.87
CAST-210ENST00000484552 ZBED6P86452 979 aa9.64□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 86.2 ms