RNA–Protein interactions for RNA: ENST00000484378.1

HLA-C-207, Transcript of major histocompatibility complex, class I, C, humanhuman

Gene HLA-C, Length 862 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-C-207ENST00000484378 ANKRD36CQ5JPF3 1778 aa37■■■■□ 3.51
HLA-C-207ENST00000484378 HDGFL1Q5TGJ6 251 aa36.99■■■■□ 3.51
HLA-C-207ENST00000484378 CFAP44Q96MT7 982 aa36.99■■■■□ 3.51
HLA-C-207ENST00000484378 ZNF277Q9NRM2 450 aaPredicted RBP36.99■■■■□ 3.51
HLA-C-207ENST00000484378 HSP90AB3PQ58FF7 597 aa36.98■■■■□ 3.51
HLA-C-207ENST00000484378 UTP14AQ9BVJ6 771 aaKnown RBP36.98■■■■□ 3.51
HLA-C-207ENST00000484378 CHPF2Q9P2E5 772 aa36.98■■■■□ 3.51
HLA-C-207ENST00000484378 POTECB2RU33 542 aa36.97■■■■□ 3.51
HLA-C-207ENST00000484378 APAF1O14727 1248 aa36.97■■■■□ 3.51
HLA-C-207ENST00000484378 HOXB7P09629 217 aa36.97■■■■□ 3.51
HLA-C-207ENST00000484378 HOXA10P31260 410 aaPredicted RBP36.96■■■■□ 3.51
HLA-C-207ENST00000484378 DDNO94850 711 aaPredicted RBP36.95■■■■□ 3.51
HLA-C-207ENST00000484378 RBM17Q96I25 401 aaKnown RBP36.95■■■■□ 3.51
HLA-C-207ENST00000484378 ZEB1P37275 1124 aaPredicted RBP36.94■■■■□ 3.5
HLA-C-207ENST00000484378 RNF123Q5XPI4 1314 aa36.93■■■■□ 3.5
HLA-C-207ENST00000484378 C3orf67Q6ZVT6 689 aa36.93■■■■□ 3.5
HLA-C-207ENST00000484378 NLRP3Q96P20 1036 aa36.93■■■■□ 3.5
HLA-C-207ENST00000484378 MBIPQ9NS73 344 aa36.93■■■■□ 3.5
HLA-C-207ENST00000484378 CC2D2BQ6DHV5 1058 aa36.92■■■■□ 3.5
HLA-C-207ENST00000484378 CRAMP1Q96RY5 1269 aa36.92■■■■□ 3.5
HLA-C-207ENST00000484378 SNED1Q8TER0 1413 aa36.92■■■■□ 3.5
HLA-C-207ENST00000484378 CALD1Q05682 793 aaKnown RBP36.91■■■■□ 3.5
HLA-C-207ENST00000484378 NLRP10Q86W26 655 aa36.91■■■■□ 3.5
HLA-C-207ENST00000484378 SYNE4Q8N205 404 aa36.91■■■■□ 3.5
HLA-C-207ENST00000484378 IARSP41252 1262 aaKnown RBP36.9■■■■□ 3.5
HLA-C-207ENST00000484378 HTRA3P83110 453 aa36.9■■■■□ 3.5
HLA-C-207ENST00000484378 TCIRG1Q13488 830 aa36.9■■■■□ 3.5
HLA-C-207ENST00000484378 DUSP27Q5VZP5 1158 aa36.9■■■■□ 3.5
HLA-C-207ENST00000484378 DNAJC5GQ8N7S2 189 aa36.9■■■■□ 3.5
HLA-C-207ENST00000484378 PSMD1Q99460 953 aa36.9■■■■□ 3.5
HLA-C-207ENST00000484378 DBF4Q9UBU7 674 aaPredicted RBP36.9■■■■□ 3.5
HLA-C-207ENST00000484378 PPEF1O14829 653 aaPredicted RBP36.89■■■■□ 3.5
HLA-C-207ENST00000484378 SLC10A5Q5PT55 438 aa36.88■■■■□ 3.49
HLA-C-207ENST00000484378 IFT57Q9NWB7 429 aa36.88■■■■□ 3.49
HLA-C-207ENST00000484378 ZNF541Q9H0D2 1346 aa36.87■■■■□ 3.49
HLA-C-207ENST00000484378 ZNF853P0CG23 659 aa36.87■■■■□ 3.49
HLA-C-207ENST00000484378 GNAI1P63096 354 aa36.86■■■■□ 3.49
HLA-C-207ENST00000484378 TRMT112Q9UI30 125 aaKnown RBP36.86■■■■□ 3.49
HLA-C-207ENST00000484378 IQCA1LA6NCM1 817 aa36.85■■■■□ 3.49
HLA-C-207ENST00000484378 TCERG1O14776 1098 aaKnown RBP36.85■■■■□ 3.49
HLA-C-207ENST00000484378 GRIPAP1Q4V328 841 aa36.85■■■■□ 3.49
HLA-C-207ENST00000484378 PLBD2Q8NHP8 589 aa36.85■■■■□ 3.49
HLA-C-207ENST00000484378 L3MBTL3Q96JM7 780 aaPredicted RBP36.84■■■■□ 3.49
HLA-C-207ENST00000484378 HYPKQ9NX55 129 aa36.84■■■■□ 3.49
HLA-C-207ENST00000484378 SH3TC1Q8TE82 1336 aa36.84■■■■□ 3.49
HLA-C-207ENST00000484378 LAMB2P55268 1798 aa36.83■■■■□ 3.49
HLA-C-207ENST00000484378 HCLS1P14317 486 aaPredicted RBP36.83■■■■□ 3.49
HLA-C-207ENST00000484378 ANKRD13DQ6ZTN6 518 aa36.83■■■■□ 3.49
HLA-C-207ENST00000484378 SLC51AQ86UW1 340 aa36.82■■■■□ 3.48
HLA-C-207ENST00000484378 JDP2Q8WYK2 163 aa36.82■■■■□ 3.48
HLA-C-207ENST00000484378 TMX4Q9H1E5 349 aaPredicted RBP36.82■■■■□ 3.48
HLA-C-207ENST00000484378 SCN4AP35499 1836 aa36.82■■■■□ 3.48
HLA-C-207ENST00000484378 CCDC184Q52MB2 194 aa36.81■■■■□ 3.48
HLA-C-207ENST00000484378 ABCC4O15439 1325 aa36.81■■■■□ 3.48
HLA-C-207ENST00000484378 FZD9O00144 591 aa36.8■■■■□ 3.48
HLA-C-207ENST00000484378 KLRG1Q96E93 195 aa36.8■■■■□ 3.48
HLA-C-207ENST00000484378 ZNF428Q96B54 188 aa36.79■■■■□ 3.48
HLA-C-207ENST00000484378 CHADLQ6NUI6 762 aa36.78■■■■□ 3.48
HLA-C-207ENST00000484378 ELL2O00472 640 aaPredicted RBP36.77■■■■□ 3.48
HLA-C-207ENST00000484378 POTEIP0CG38 1075 aa36.77■■■■□ 3.48
HLA-C-207ENST00000484378 POTEJP0CG39 1038 aa36.77■■■■□ 3.48
HLA-C-207ENST00000484378 TAF1DQ9H5J8 278 aaPredicted RBP36.77■■■■□ 3.48
HLA-C-207ENST00000484378 ATP6V0A2Q9Y487 856 aa36.77■■■■□ 3.48
HLA-C-207ENST00000484378 COL4A5P29400 1685 aa36.77■■■■□ 3.48
HLA-C-207ENST00000484378 LARGE2Q8N3Y3 721 aa36.76■■■■□ 3.48
HLA-C-207ENST00000484378 ATP5J2-PTCD1G3V325 749 aa36.75■■■■□ 3.47
HLA-C-207ENST00000484378 DDX46Q7L014 1031 aaKnown RBP36.75■■■■□ 3.47
HLA-C-207ENST00000484378 ISCA1Q9BUE6 129 aa36.75■■■■□ 3.47
HLA-C-207ENST00000484378 GPC2Q8N158 579 aa36.74■■■■□ 3.47
HLA-C-207ENST00000484378 HACL1Q9UJ83 578 aa36.74■■■■□ 3.47
HLA-C-207ENST00000484378 EIF6P56537 245 aaKnown RBP36.73■■■■□ 3.47
HLA-C-207ENST00000484378 GOLGA2Q08379 1002 aa36.73■■■■□ 3.47
HLA-C-207ENST00000484378 LDHDQ86WU2 507 aa36.73■■■■□ 3.47
HLA-C-207ENST00000484378 DDX60Q8IY21 1712 aaKnown RBP36.73■■■■□ 3.47
HLA-C-207ENST00000484378 BBOX1O75936 387 aa36.72■■■■□ 3.47
HLA-C-207ENST00000484378 RIC3Q7Z5B4 369 aa36.71■■■■□ 3.47
HLA-C-207ENST00000484378 C8orf58Q8NAV2 365 aa36.71■■■■□ 3.47
HLA-C-207ENST00000484378 ZNF316A6NFI3 1004 aaPredicted RBP36.7■■■■□ 3.47
HLA-C-207ENST00000484378 PPIP5K2O43314 1243 aa36.7■■■■□ 3.47
HLA-C-207ENST00000484378 GRAPQ13588 217 aa36.7■■■■□ 3.47
HLA-C-207ENST00000484378 EAPPQ56P03 285 aaPredicted RBP36.7■■■■□ 3.47
HLA-C-207ENST00000484378 GRAPLQ8TC17 118 aaPredicted RBP36.7■■■■□ 3.47
HLA-C-207ENST00000484378 FAM89AQ96GI7 184 aa36.7■■■■□ 3.47
HLA-C-207ENST00000484378 GJA3Q9Y6H8 435 aa36.7■■■■□ 3.47
HLA-C-207ENST00000484378 EPHX2P34913 555 aa36.69■■■■□ 3.46
HLA-C-207ENST00000484378 NIM1KQ8IY84 436 aa36.69■■■■□ 3.46
HLA-C-207ENST00000484378 PHAXQ9H814 394 aaKnown RBP36.69■■■■□ 3.46
HLA-C-207ENST00000484378 MRS2Q9HD23 443 aa36.68■■■■□ 3.46
HLA-C-207ENST00000484378 ANP32CO43423 234 aa36.67■■■■□ 3.46
HLA-C-207ENST00000484378 AOC3Q16853 763 aa36.67■■■■□ 3.46
HLA-C-207ENST00000484378 DPP8Q6V1X1 898 aaPredicted RBP36.67■■■■□ 3.46
HLA-C-207ENST00000484378 SP8Q8IXZ3 490 aa36.67■■■■□ 3.46
HLA-C-207ENST00000484378 JMYQ8N9B5 988 aa36.67■■■■□ 3.46
HLA-C-207ENST00000484378 SUPT20HQ8NEM7 779 aa36.67■■■■□ 3.46
HLA-C-207ENST00000484378 CHMP4AQ9BY43 222 aa36.67■■■■□ 3.46
HLA-C-207ENST00000484378 TRIM28Q13263 835 aaKnown RBP36.66■■■■□ 3.46
HLA-C-207ENST00000484378 RTL5Q5HYW3 569 aaPredicted RBP36.66■■■■□ 3.46
HLA-C-207ENST00000484378 CCDC27Q2M243 656 aa36.65■■■■□ 3.46
HLA-C-207ENST00000484378 CCDC30Q5VVM6 783 aa36.65■■■■□ 3.46
HLA-C-207ENST00000484378 VPS33BQ9H267 617 aa36.65■■■■□ 3.46
Retrieved 100 of 20,778 RNA–protein pairs in 14.8 ms