RNA–Protein interactions for RNA: ENST00000484275.1

SCAF11-207, Transcript of SR-related CTD associated factor 11, humanhuman

TSL 3

Gene SCAF11, Length 562 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF11-207ENST00000484275 ANKMY2Q8IV38 441 aa9.83□□□□□ -0.84
SCAF11-207ENST00000484275 ARXQ96QS3 562 aa9.83□□□□□ -0.84
SCAF11-207ENST00000484275 HINFPQ9BQA5 517 aa9.83□□□□□ -0.84
SCAF11-207ENST00000484275 KCNH4Q9UQ05 1017 aa9.83□□□□□ -0.84
SCAF11-207ENST00000484275 FAM196BA6NMK8 535 aa9.82□□□□□ -0.84
SCAF11-207ENST00000484275 ALAS2P22557 587 aa9.82□□□□□ -0.84
SCAF11-207ENST00000484275 C8orf86Q6ZUL3 223 aa9.82□□□□□ -0.84
SCAF11-207ENST00000484275 BTLAQ7Z6A9 289 aa9.82□□□□□ -0.84
SCAF11-207ENST00000484275 BCS1LQ9Y276 419 aa9.82□□□□□ -0.84
SCAF11-207ENST00000484275 M0R082 166 aa9.81□□□□□ -0.84
SCAF11-207ENST00000484275 ALBP02768 609 aa9.81□□□□□ -0.84
SCAF11-207ENST00000484275 CFAP70Q5T0N1 1121 aa9.81□□□□□ -0.84
SCAF11-207ENST00000484275 ZNF417Q8TAU3 575 aa9.81□□□□□ -0.84
SCAF11-207ENST00000484275 ZNF587Q96SQ5 575 aaPredicted RBP9.81□□□□□ -0.84
SCAF11-207ENST00000484275 VRTNQ9H8Y1 702 aa9.81□□□□□ -0.84
SCAF11-207ENST00000484275 ADH7P40394 386 aa9.8□□□□□ -0.84
SCAF11-207ENST00000484275 ZNF777Q9ULD5 760 aaPredicted RBP9.8□□□□□ -0.84
SCAF11-207ENST00000484275 FURINP09958 794 aa9.79□□□□□ -0.84
SCAF11-207ENST00000484275 IGFBP4P22692 258 aa9.79□□□□□ -0.84
SCAF11-207ENST00000484275 RTN1Q16799 776 aa9.79□□□□□ -0.84
SCAF11-207ENST00000484275 MICALL1Q8N3F8 863 aa9.79□□□□□ -0.84
SCAF11-207ENST00000484275 BHMTQ93088 406 aa9.79□□□□□ -0.84
SCAF11-207ENST00000484275 DMGDHQ9UI17 866 aaKnown RBP9.79□□□□□ -0.84
SCAF11-207ENST00000484275 GRNP28799 593 aaKnown RBP9.78□□□□□ -0.84
SCAF11-207ENST00000484275 C20orf204Q6ZNR8 217 aa9.78□□□□□ -0.84
SCAF11-207ENST00000484275 K7ELQ4 463 aaPredicted RBP9.77□□□□□ -0.85
SCAF11-207ENST00000484275 PRDM6Q9NQX0 595 aa9.77□□□□□ -0.85
SCAF11-207ENST00000484275 SPATA31C1P0DKV0 1188 aa9.76□□□□□ -0.85
SCAF11-207ENST00000484275 WEE1P30291 646 aa9.76□□□□□ -0.85
SCAF11-207ENST00000484275 NEUROD1Q13562 356 aa9.76□□□□□ -0.85
SCAF11-207ENST00000484275 IER5Q5VY09 327 aa9.76□□□□□ -0.85
SCAF11-207ENST00000484275 KLK14Q9P0G3 267 aa9.76□□□□□ -0.85
SCAF11-207ENST00000484275 FAM229AH3BQW9 127 aa9.75□□□□□ -0.85
SCAF11-207ENST00000484275 TGFBR3LH3BV60 316 aa9.75□□□□□ -0.85
SCAF11-207ENST00000484275 NID1P14543 1247 aa9.75□□□□□ -0.85
SCAF11-207ENST00000484275 CDCA8Q53HL2 280 aa9.75□□□□□ -0.85
SCAF11-207ENST00000484275 GSX2Q9BZM3 304 aa9.75□□□□□ -0.85
SCAF11-207ENST00000484275 QTRT2Q9H974 415 aaKnown RBP9.75□□□□□ -0.85
SCAF11-207ENST00000484275 HIF1AQ16665 826 aa9.74□□□□□ -0.85
SCAF11-207ENST00000484275 INPP5BP32019 993 aa9.72□□□□□ -0.85
SCAF11-207ENST00000484275 TBC1D8BQ0IIM8 1120 aa9.72□□□□□ -0.85
SCAF11-207ENST00000484275 UBE2OQ9C0C9 1292 aaKnown RBP9.72□□□□□ -0.85
SCAF11-207ENST00000484275 IGFLR1Q9H665 355 aa9.72□□□□□ -0.85
SCAF11-207ENST00000484275 SLC6A14Q9UN76 642 aa9.72□□□□□ -0.85
SCAF11-207ENST00000484275 ITGB7P26010 798 aa9.71□□□□□ -0.86
SCAF11-207ENST00000484275 DGKZQ13574 1117 aa9.71□□□□□ -0.86
SCAF11-207ENST00000484275 NAGPAQ9UK23 515 aa9.71□□□□□ -0.86
SCAF11-207ENST00000484275 NFKB1P19838 968 aa9.7□□□□□ -0.86
SCAF11-207ENST00000484275 RFX1P22670 979 aa9.7□□□□□ -0.86
SCAF11-207ENST00000484275 IDH3AP50213 366 aa9.7□□□□□ -0.86
SCAF11-207ENST00000484275 CCINQ13939 588 aa9.7□□□□□ -0.86
SCAF11-207ENST00000484275 DOC2BQ14184 412 aa9.7□□□□□ -0.86
SCAF11-207ENST00000484275 FAM200AQ8TCP9 573 aa9.7□□□□□ -0.86
SCAF11-207ENST00000484275 DNAJB12Q9NXW2 375 aaKnown RBP9.7□□□□□ -0.86
SCAF11-207ENST00000484275 GTF3C5Q9Y5Q8 519 aaPredicted RBP9.7□□□□□ -0.86
SCAF11-207ENST00000484275 SPDYE3A6NKU9 549 aa9.69□□□□□ -0.86
SCAF11-207ENST00000484275 FOXO3O43524 673 aa9.69□□□□□ -0.86
SCAF11-207ENST00000484275 PRRT3Q5FWE3 981 aa9.69□□□□□ -0.86
SCAF11-207ENST00000484275 LRFN2Q9ULH4 789 aa9.69□□□□□ -0.86
SCAF11-207ENST00000484275 GATA4P43694 442 aa9.68□□□□□ -0.86
SCAF11-207ENST00000484275 GRIK4Q16099 956 aa9.68□□□□□ -0.86
SCAF11-207ENST00000484275 NUDT8Q8WV74 236 aa9.68□□□□□ -0.86
SCAF11-207ENST00000484275 MYO19Q96H55 970 aa9.68□□□□□ -0.86
SCAF11-207ENST00000484275 EFCC1Q9HA90 598 aa9.68□□□□□ -0.86
SCAF11-207ENST00000484275 ZFATQ9P243 1243 aa9.68□□□□□ -0.86
SCAF11-207ENST00000484275 NOVA2Q9UNW9 492 aaKnown RBP9.68□□□□□ -0.86
SCAF11-207ENST00000484275 LILRB5O75023 590 aa9.67□□□□□ -0.86
SCAF11-207ENST00000484275 FKBP5Q13451 457 aaPredicted RBP9.67□□□□□ -0.86
SCAF11-207ENST00000484275 PNMA5Q96PV4 448 aa9.67□□□□□ -0.86
SCAF11-207ENST00000484275 ZMIZ1Q9ULJ6 1067 aa9.67□□□□□ -0.86
SCAF11-207ENST00000484275 MICAL2O94851 1124 aa9.66□□□□□ -0.86
SCAF11-207ENST00000484275 TRIM28Q13263 835 aaKnown RBP9.66□□□□□ -0.86
SCAF11-207ENST00000484275 C11orf91Q3C1V1 193 aa9.66□□□□□ -0.86
SCAF11-207ENST00000484275 PRIMPOLQ96LW4 560 aa9.66□□□□□ -0.86
SCAF11-207ENST00000484275 JPH1Q9HDC5 661 aaPredicted RBP9.66□□□□□ -0.86
SCAF11-207ENST00000484275 USP20Q9Y2K6 914 aa9.66□□□□□ -0.86
SCAF11-207ENST00000484275 OPLAHO14841 1288 aa9.65□□□□□ -0.86
SCAF11-207ENST00000484275 TARSP26639 723 aaKnown RBP9.65□□□□□ -0.86
SCAF11-207ENST00000484275 ARSDP51689 593 aa9.65□□□□□ -0.86
SCAF11-207ENST00000484275 AFF1P51825 1210 aaKnown RBP9.65□□□□□ -0.86
SCAF11-207ENST00000484275 FAM69CQ0P6D2 419 aa9.65□□□□□ -0.86
SCAF11-207ENST00000484275 TRAPPC3LQ5T215 181 aa9.65□□□□□ -0.86
SCAF11-207ENST00000484275 PSAPL1Q6NUJ1 521 aa9.65□□□□□ -0.86
SCAF11-207ENST00000484275 ILDR2Q71H61 639 aa9.65□□□□□ -0.86
SCAF11-207ENST00000484275 KRT25Q7Z3Z0 450 aa9.65□□□□□ -0.86
SCAF11-207ENST00000484275 ZBTB42B2RXF5 422 aa9.64□□□□□ -0.87
SCAF11-207ENST00000484275 APBA3O96018 575 aa9.64□□□□□ -0.87
SCAF11-207ENST00000484275 EPB42P16452 691 aa9.64□□□□□ -0.87
SCAF11-207ENST00000484275 SRPK2P78362 688 aaKnown RBP9.64□□□□□ -0.87
SCAF11-207ENST00000484275 IFT43Q96FT9 208 aa9.64□□□□□ -0.87
SCAF11-207ENST00000484275 A0A0A0MRY4 1105 aa9.63□□□□□ -0.87
SCAF11-207ENST00000484275 MAP3K6O95382 1288 aa9.63□□□□□ -0.87
SCAF11-207ENST00000484275 OCLNQ16625 522 aa9.63□□□□□ -0.87
SCAF11-207ENST00000484275 COX20Q5RI15 118 aa9.63□□□□□ -0.87
SCAF11-207ENST00000484275 XP32Q5T750 250 aa9.63□□□□□ -0.87
SCAF11-207ENST00000484275 STK32AQ8WU08 396 aa9.63□□□□□ -0.87
SCAF11-207ENST00000484275 VTI1AQ96AJ9 217 aa9.63□□□□□ -0.87
SCAF11-207ENST00000484275 SEMA6BQ9H3T3 888 aa9.63□□□□□ -0.87
SCAF11-207ENST00000484275 TPSG1Q9NRR2 321 aa9.63□□□□□ -0.87
SCAF11-207ENST00000484275 PRMT3O60678 531 aa9.62□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms