RNA–Protein interactions for RNA: ENST00000484203.5

PTCD3-215, Transcript of pentatricopeptide repeat domain 3, humanhuman

TSL 2

Gene PTCD3, Length 928 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-215ENST00000484203 ITGBL1O95965 494 aaPredicted RBP8.33□□□□□ -1.08
PTCD3-215ENST00000484203 POLD1P28340 1107 aa8.33□□□□□ -1.08
PTCD3-215ENST00000484203 NCAPD2Q15021 1401 aa8.33□□□□□ -1.08
PTCD3-215ENST00000484203 PCDHB3Q9Y5E6 796 aa8.33□□□□□ -1.08
PTCD3-215ENST00000484203 FAM208AQ9UK61 1670 aaKnown RBP8.33□□□□□ -1.08
PTCD3-215ENST00000484203 NPC1L1Q9UHC9 1359 aa8.33□□□□□ -1.08
PTCD3-215ENST00000484203 RGPD3A6NKT7 1758 aaPredicted RBP8.33□□□□□ -1.08
PTCD3-215ENST00000484203 RGPD4Q7Z3J3 1758 aa8.33□□□□□ -1.08
PTCD3-215ENST00000484203 IGSF1Q8N6C5 1336 aa8.32□□□□□ -1.08
PTCD3-215ENST00000484203 ERVV-2B6SEH9 535 aa8.32□□□□□ -1.08
PTCD3-215ENST00000484203 ZBTB7AO95365 584 aa8.32□□□□□ -1.08
PTCD3-215ENST00000484203 FUT2Q10981 343 aa8.32□□□□□ -1.08
PTCD3-215ENST00000484203 MPRIPQ6WCQ1 1025 aa8.32□□□□□ -1.08
PTCD3-215ENST00000484203 NUTM1Q86Y26 1132 aa8.32□□□□□ -1.08
PTCD3-215ENST00000484203 DCAF5Q96JK2 942 aa8.32□□□□□ -1.08
PTCD3-215ENST00000484203 LRRC4BQ9NT99 713 aa8.32□□□□□ -1.08
PTCD3-215ENST00000484203 TMOD3Q9NYL9 352 aa8.32□□□□□ -1.08
PTCD3-215ENST00000484203 KDM4AO75164 1064 aa8.31□□□□□ -1.08
PTCD3-215ENST00000484203 PHKG2P15735 406 aa8.31□□□□□ -1.08
PTCD3-215ENST00000484203 C1orf141Q5JVX7 400 aa8.31□□□□□ -1.08
PTCD3-215ENST00000484203 PER1O15534 1290 aaPredicted RBP8.3□□□□□ -1.08
PTCD3-215ENST00000484203 ATP6V1AP38606 617 aa8.3□□□□□ -1.08
PTCD3-215ENST00000484203 PUS10Q3MIT2 529 aaKnown RBP8.3□□□□□ -1.08
PTCD3-215ENST00000484203 PIGBQ92521 554 aa8.3□□□□□ -1.08
PTCD3-215ENST00000484203 ARXQ96QS3 562 aa8.3□□□□□ -1.08
PTCD3-215ENST00000484203 PALLDQ8WX93 1383 aa8.3□□□□□ -1.08
PTCD3-215ENST00000484203 LTN1O94822 1766 aa8.3□□□□□ -1.08
PTCD3-215ENST00000484203 COPS2P61201 443 aa8.29□□□□□ -1.08
PTCD3-215ENST00000484203 ZNF827Q17R98 1081 aa8.29□□□□□ -1.08
PTCD3-215ENST00000484203 GRIPAP1Q4V328 841 aa8.29□□□□□ -1.08
PTCD3-215ENST00000484203 FAM117AQ9C073 453 aa8.29□□□□□ -1.08
PTCD3-215ENST00000484203 MAP3K5Q99683 1374 aa8.29□□□□□ -1.08
PTCD3-215ENST00000484203 RREB1Q92766 1687 aa8.29□□□□□ -1.08
PTCD3-215ENST00000484203 NHSQ6T4R5 1651 aa8.28□□□□□ -1.08
PTCD3-215ENST00000484203 LOC102724428A0A0B4J2F2 783 aa8.28□□□□□ -1.08
PTCD3-215ENST00000484203 DIAPH1O60610 1272 aaKnown RBP8.28□□□□□ -1.08
PTCD3-215ENST00000484203 IL13P35225 146 aa8.28□□□□□ -1.08
PTCD3-215ENST00000484203 MTHFSP49914 203 aa8.28□□□□□ -1.08
PTCD3-215ENST00000484203 SIK1P57059 783 aa8.28□□□□□ -1.08
PTCD3-215ENST00000484203 USP46P62068 366 aa8.28□□□□□ -1.08
PTCD3-215ENST00000484203 SULT6B1Q6IMI4 303 aa8.28□□□□□ -1.08
PTCD3-215ENST00000484203 ZNF530Q6P9A1 599 aaPredicted RBP8.28□□□□□ -1.08
PTCD3-215ENST00000484203 BLOC1S3Q6QNY0 202 aa8.28□□□□□ -1.08
PTCD3-215ENST00000484203 SPIRE2Q8WWL2 714 aa8.28□□□□□ -1.08
PTCD3-215ENST00000484203 DDRGK1Q96HY6 314 aa8.28□□□□□ -1.08
PTCD3-215ENST00000484203 CFAP53Q96M91 514 aa8.28□□□□□ -1.08
PTCD3-215ENST00000484203 MTRQ99707 1265 aa8.28□□□□□ -1.08
PTCD3-215ENST00000484203 PNPLA7Q6ZV29 1317 aa8.28□□□□□ -1.08
PTCD3-215ENST00000484203 WNK3Q9BYP7 1800 aa8.27□□□□□ -1.09
PTCD3-215ENST00000484203 KDRP35968 1356 aa8.27□□□□□ -1.09
PTCD3-215ENST00000484203 NUP188Q5SRE5 1749 aa8.27□□□□□ -1.09
PTCD3-215ENST00000484203 SSFA2P28290 1259 aa8.27□□□□□ -1.09
PTCD3-215ENST00000484203 CABP4P57796 275 aa8.27□□□□□ -1.09
PTCD3-215ENST00000484203 KCNC4Q03721 635 aa8.27□□□□□ -1.09
PTCD3-215ENST00000484203 SYT17Q9BSW7 474 aa8.27□□□□□ -1.09
PTCD3-215ENST00000484203 PDGFDQ9GZP0 370 aaPredicted RBP8.27□□□□□ -1.09
PTCD3-215ENST00000484203 NUDCQ9Y266 331 aa8.27□□□□□ -1.09
PTCD3-215ENST00000484203 MYOM1P52179 1685 aa8.27□□□□□ -1.09
PTCD3-215ENST00000484203 DIXDC1Q155Q3 683 aa8.26□□□□□ -1.09
PTCD3-215ENST00000484203 AKAP4Q5JQC9 854 aa8.26□□□□□ -1.09
PTCD3-215ENST00000484203 TJAP1Q5JTD0 557 aa8.26□□□□□ -1.09
PTCD3-215ENST00000484203 MORN1Q5T089 497 aa8.26□□□□□ -1.09
PTCD3-215ENST00000484203 CC2D1BQ5T0F9 858 aaKnown RBP8.26□□□□□ -1.09
PTCD3-215ENST00000484203 IL27Q8NEV9 243 aa8.26□□□□□ -1.09
PTCD3-215ENST00000484203 TBC1D2Q9BYX2 928 aa8.26□□□□□ -1.09
PTCD3-215ENST00000484203 FHDC1Q9C0D6 1143 aaPredicted RBP8.26□□□□□ -1.09
PTCD3-215ENST00000484203 IL21Q9HBE4 155 aa8.26□□□□□ -1.09
PTCD3-215ENST00000484203 RGPD5Q99666 1765 aa8.25□□□□□ -1.09
PTCD3-215ENST00000484203 KIF20BQ96Q89 1820 aa8.25□□□□□ -1.09
PTCD3-215ENST00000484203 HOXA2O43364 376 aa8.25□□□□□ -1.09
PTCD3-215ENST00000484203 NR1I2O75469 434 aa8.25□□□□□ -1.09
PTCD3-215ENST00000484203 RC3H1Q5TC82 1133 aaKnown RBP8.25□□□□□ -1.09
PTCD3-215ENST00000484203 ATG3Q9NT62 314 aa8.25□□□□□ -1.09
PTCD3-215ENST00000484203 ASAP1Q9ULH1 1129 aa8.25□□□□□ -1.09
PTCD3-215ENST00000484203 KCNQ4P56696 695 aa8.24□□□□□ -1.09
PTCD3-215ENST00000484203 COL23A1Q86Y22 540 aaPredicted RBP8.24□□□□□ -1.09
PTCD3-215ENST00000484203 AEBP1Q8IUX7 1158 aa8.24□□□□□ -1.09
PTCD3-215ENST00000484203 SCUBE3Q8IX30 993 aa8.24□□□□□ -1.09
PTCD3-215ENST00000484203 GAS2L2Q8NHY3 880 aa8.24□□□□□ -1.09
PTCD3-215ENST00000484203 ZNF516Q92618 1163 aa8.24□□□□□ -1.09
PTCD3-215ENST00000484203 HLA-CQ95604 372 aa8.24□□□□□ -1.09
PTCD3-215ENST00000484203 RTCBQ9Y3I0 505 aaKnown RBP8.24□□□□□ -1.09
PTCD3-215ENST00000484203 CD2APQ9Y5K6 639 aa8.24□□□□□ -1.09
PTCD3-215ENST00000484203 SBF2Q86WG5 1849 aa8.24□□□□□ -1.09
PTCD3-215ENST00000484203 MOXD2PA6NHM9 499 aa8.23□□□□□ -1.09
PTCD3-215ENST00000484203 GRIN3BO60391 1043 aa8.23□□□□□ -1.09
PTCD3-215ENST00000484203 ZPR1O75312 459 aa8.23□□□□□ -1.09
PTCD3-215ENST00000484203 NDUFV2P19404 249 aa8.23□□□□□ -1.09
PTCD3-215ENST00000484203 YY1P25490 414 aa8.23□□□□□ -1.09
PTCD3-215ENST00000484203 GUCA2AQ02747 115 aa8.23□□□□□ -1.09
PTCD3-215ENST00000484203 TRAPPC3LQ5T215 181 aa8.23□□□□□ -1.09
PTCD3-215ENST00000484203 NLGN1Q8N2Q7 840 aa8.23□□□□□ -1.09
PTCD3-215ENST00000484203 RSPH6AQ9H0K4 717 aa8.23□□□□□ -1.09
PTCD3-215ENST00000484203 SLC27A5Q9Y2P5 690 aa8.23□□□□□ -1.09
PTCD3-215ENST00000484203 PAPPAQ13219 1627 aa8.22□□□□□ -1.09
PTCD3-215ENST00000484203 U2SURPO15042 1029 aaKnown RBP8.22□□□□□ -1.09
PTCD3-215ENST00000484203 NEFMP07197 916 aa8.22□□□□□ -1.09
PTCD3-215ENST00000484203 GPR162Q16538 588 aa8.22□□□□□ -1.09
PTCD3-215ENST00000484203 NFATC2IPQ8NCF5 419 aa8.22□□□□□ -1.09
PTCD3-215ENST00000484203 SLC52A2Q9HAB3 445 aa8.22□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms