RNA–Protein interactions for RNA: ENST00000484084.5

RTFDC1-208, Transcript of Protein RTF2 homolog, humanhuman

TSL 5

Gene RTFDC1, Length 657 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTFDC1-208ENST00000484084 NPHP1O15259 732 aa11.61□□□□□ -0.55
RTFDC1-208ENST00000484084 ALDH1B1P30837 517 aa11.61□□□□□ -0.55
RTFDC1-208ENST00000484084 MAP2K1Q02750 393 aaPredicted RBP11.61□□□□□ -0.55
RTFDC1-208ENST00000484084 ZNF652Q9Y2D9 606 aa11.61□□□□□ -0.55
RTFDC1-208ENST00000484084 TRPM7Q96QT4 1865 aa11.61□□□□□ -0.55
RTFDC1-208ENST00000484084 CYP4F22Q6NT55 531 aa11.6□□□□□ -0.55
RTFDC1-208ENST00000484084 CAPNS2Q96L46 248 aa11.6□□□□□ -0.55
RTFDC1-208ENST00000484084 MIS18AQ9NYP9 233 aa11.6□□□□□ -0.55
RTFDC1-208ENST00000484084 ABT1Q9ULW3 272 aaKnown RBP11.6□□□□□ -0.55
RTFDC1-208ENST00000484084 TTLL7Q6ZT98 887 aa11.59□□□□□ -0.55
RTFDC1-208ENST00000484084 TLL2Q9Y6L7 1015 aa11.59□□□□□ -0.55
RTFDC1-208ENST00000484084 ERVV-1B6SEH8 477 aa11.58□□□□□ -0.56
RTFDC1-208ENST00000484084 AOC2O75106 756 aa11.58□□□□□ -0.56
RTFDC1-208ENST00000484084 SUSD4Q5VX71 490 aa11.58□□□□□ -0.56
RTFDC1-208ENST00000484084 LRP10Q7Z4F1 713 aa11.58□□□□□ -0.56
RTFDC1-208ENST00000484084 GPR101Q96P66 508 aaPredicted RBP11.58□□□□□ -0.56
RTFDC1-208ENST00000484084 PGAP2Q9UHJ9 254 aa11.58□□□□□ -0.56
RTFDC1-208ENST00000484084 TSKSQ9UJT2 592 aa11.58□□□□□ -0.56
RTFDC1-208ENST00000484084 GJA3Q9Y6H8 435 aa11.58□□□□□ -0.56
RTFDC1-208ENST00000484084 IBTKQ9P2D0 1353 aaPredicted RBP11.57□□□□□ -0.56
RTFDC1-208ENST00000484084 DLG5Q8TDM6 1919 aa11.57□□□□□ -0.56
RTFDC1-208ENST00000484084 NTSR2O95665 410 aa11.57□□□□□ -0.56
RTFDC1-208ENST00000484084 HIRAP54198 1017 aaPredicted RBP11.57□□□□□ -0.56
RTFDC1-208ENST00000484084 CNGB1Q14028 1251 aaPredicted RBP11.57□□□□□ -0.56
RTFDC1-208ENST00000484084 CC2D2BQ6DHV5 1058 aa11.57□□□□□ -0.56
RTFDC1-208ENST00000484084 USP50Q70EL3 339 aaPredicted RBP11.57□□□□□ -0.56
RTFDC1-208ENST00000484084 NPM2Q86SE8 214 aaKnown RBP11.57□□□□□ -0.56
RTFDC1-208ENST00000484084 SAPCD2Q86UD0 394 aa11.57□□□□□ -0.56
RTFDC1-208ENST00000484084 ZNF34Q8IZ26 560 aa11.57□□□□□ -0.56
RTFDC1-208ENST00000484084 JDP2Q8WYK2 163 aa11.57□□□□□ -0.56
RTFDC1-208ENST00000484084 CRAMP1Q96RY5 1269 aa11.57□□□□□ -0.56
RTFDC1-208ENST00000484084 GPRC5DQ9NZD1 345 aa11.57□□□□□ -0.56
RTFDC1-208ENST00000484084 MAP3K15Q6ZN16 1313 aa11.57□□□□□ -0.56
RTFDC1-208ENST00000484084 HTATSF1O43719 755 aaKnown RBP11.56□□□□□ -0.56
RTFDC1-208ENST00000484084 TAF7Q15545 349 aaPredicted RBP11.56□□□□□ -0.56
RTFDC1-208ENST00000484084 ZIC5Q96T25 663 aa11.56□□□□□ -0.56
RTFDC1-208ENST00000484084 LAMB2P55268 1798 aa11.56□□□□□ -0.56
RTFDC1-208ENST00000484084 DUOX1Q9NRD9 1551 aa11.55□□□□□ -0.56
RTFDC1-208ENST00000484084 PPP2R1AP30153 589 aa11.55□□□□□ -0.56
RTFDC1-208ENST00000484084 MAP2K2P36507 400 aa11.55□□□□□ -0.56
RTFDC1-208ENST00000484084 EIF6P56537 245 aaKnown RBP11.55□□□□□ -0.56
RTFDC1-208ENST00000484084 CXCL9Q07325 125 aa11.55□□□□□ -0.56
RTFDC1-208ENST00000484084 DLK2Q6UY11 383 aa11.55□□□□□ -0.56
RTFDC1-208ENST00000484084 LARGE2Q8N3Y3 721 aa11.55□□□□□ -0.56
RTFDC1-208ENST00000484084 RTFDC1Q9BY42 306 aaPredicted RBP11.55□□□□□ -0.56
RTFDC1-208ENST00000484084 SHTN1A0MZ66 631 aa11.54□□□□□ -0.56
RTFDC1-208ENST00000484084 CCDC85CA6NKD9 419 aa11.54□□□□□ -0.56
RTFDC1-208ENST00000484084 PPEF1O14829 653 aaPredicted RBP11.54□□□□□ -0.56
RTFDC1-208ENST00000484084 GPTP24298 496 aa11.54□□□□□ -0.56
RTFDC1-208ENST00000484084 ECE1P42892 770 aa11.54□□□□□ -0.56
RTFDC1-208ENST00000484084 EIF4A1P60842 406 aaKnown RBP11.54□□□□□ -0.56
RTFDC1-208ENST00000484084 MLLT1Q03111 559 aaPredicted RBP11.54□□□□□ -0.56
RTFDC1-208ENST00000484084 PDIA6Q15084 440 aa11.54□□□□□ -0.56
RTFDC1-208ENST00000484084 AOC3Q16853 763 aa11.54□□□□□ -0.56
RTFDC1-208ENST00000484084 SLC10A5Q5PT55 438 aa11.54□□□□□ -0.56
RTFDC1-208ENST00000484084 NGEFQ8N5V2 710 aa11.54□□□□□ -0.56
RTFDC1-208ENST00000484084 NYXQ9GZU5 481 aa11.54□□□□□ -0.56
RTFDC1-208ENST00000484084 ATP6V0A2Q9Y487 856 aa11.54□□□□□ -0.56
RTFDC1-208ENST00000484084 COL4A1P02462 1669 aa11.54□□□□□ -0.56
RTFDC1-208ENST00000484084 TCERG1O14776 1098 aaKnown RBP11.53□□□□□ -0.56
RTFDC1-208ENST00000484084 U2AF1L5P0DN76 240 aaPredicted RBP11.53□□□□□ -0.56
RTFDC1-208ENST00000484084 GTF2E1P29083 439 aaPredicted RBP11.53□□□□□ -0.56
RTFDC1-208ENST00000484084 LMOD1P29536 600 aaPredicted RBP11.53□□□□□ -0.56
RTFDC1-208ENST00000484084 U2AF1Q01081 240 aaKnown RBP eCLIP11.53□□□□□ -0.56
RTFDC1-208ENST00000484084 GRM1Q13255 1194 aa11.53□□□□□ -0.56
RTFDC1-208ENST00000484084 GRIPAP1Q4V328 841 aa11.53□□□□□ -0.56
RTFDC1-208ENST00000484084 RTF1Q92541 710 aaKnown RBP11.53□□□□□ -0.56
RTFDC1-208ENST00000484084 HHIPL1Q96JK4 782 aa11.53□□□□□ -0.56
RTFDC1-208ENST00000484084 PLEKHF1Q96S99 279 aa11.53□□□□□ -0.56
RTFDC1-208ENST00000484084 GLIS2Q9BZE0 524 aaPredicted RBP11.53□□□□□ -0.56
RTFDC1-208ENST00000484084 MCOLN1Q9GZU1 580 aa11.53□□□□□ -0.56
RTFDC1-208ENST00000484084 ZBTB3Q9H5J0 574 aa11.53□□□□□ -0.56
RTFDC1-208ENST00000484084 ADARB2Q9NS39 739 aaKnown RBP11.53□□□□□ -0.56
RTFDC1-208ENST00000484084 CASP8AP2Q9UKL3 1982 aa11.53□□□□□ -0.56
RTFDC1-208ENST00000484084 TAF1P21675 1872 aa11.53□□□□□ -0.56
RTFDC1-208ENST00000484084 ANKRD36CQ5JPF3 1778 aa11.52□□□□□ -0.57
RTFDC1-208ENST00000484084 YDJCA8MPS7 323 aa11.52□□□□□ -0.57
RTFDC1-208ENST00000484084 GMPSP49915 693 aaPredicted RBP11.52□□□□□ -0.57
RTFDC1-208ENST00000484084 GIGYF2Q6Y7W6 1299 aaKnown RBP11.52□□□□□ -0.57
RTFDC1-208ENST00000484084 RPGRQ92834 1020 aaKnown RBP11.52□□□□□ -0.57
RTFDC1-208ENST00000484084 THUMPD2Q9BTF0 503 aaKnown RBP11.52□□□□□ -0.57
RTFDC1-208ENST00000484084 ZNRF3Q9ULT6 936 aa11.52□□□□□ -0.57
RTFDC1-208ENST00000484084 ABCC4O15439 1325 aa11.52□□□□□ -0.57
RTFDC1-208ENST00000484084 LRRC37AA6NMS7 1700 aa11.52□□□□□ -0.57
RTFDC1-208ENST00000484084 FAM155AB1AL88 458 aaPredicted RBP11.51□□□□□ -0.57
RTFDC1-208ENST00000484084 PPIP5K2O43314 1243 aa11.51□□□□□ -0.57
RTFDC1-208ENST00000484084 CELF2O95319 508 aaKnown RBP11.51□□□□□ -0.57
RTFDC1-208ENST00000484084 MYL6BP14649 208 aa11.51□□□□□ -0.57
RTFDC1-208ENST00000484084 BRPF1P55201 1214 aaPredicted RBP11.51□□□□□ -0.57
RTFDC1-208ENST00000484084 NIM1KQ8IY84 436 aa11.51□□□□□ -0.57
RTFDC1-208ENST00000484084 TRPM4Q8TD43 1214 aa11.51□□□□□ -0.57
RTFDC1-208ENST00000484084 RBM17Q96I25 401 aaKnown RBP11.51□□□□□ -0.57
RTFDC1-208ENST00000484084 VPS33BQ9H267 617 aa11.51□□□□□ -0.57
RTFDC1-208ENST00000484084 RRP7AQ9Y3A4 280 aaKnown RBP11.51□□□□□ -0.57
RTFDC1-208ENST00000484084 EGFRP00533 1210 aa11.5□□□□□ -0.57
RTFDC1-208ENST00000484084 KIAA2012Q0VF49 1180 aa11.5□□□□□ -0.57
RTFDC1-208ENST00000484084 PROSER3Q2NL68 480 aa11.5□□□□□ -0.57
RTFDC1-208ENST00000484084 CIAPIN1Q6FI81 312 aa11.5□□□□□ -0.57
RTFDC1-208ENST00000484084 PAXIP1Q6ZW49 1069 aaPredicted RBP11.5□□□□□ -0.57
RTFDC1-208ENST00000484084 SP8Q8IXZ3 490 aa11.49□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms