RNA–Protein interactions for RNA: ENST00000483474.1

RTCA-204, Transcript of RNA 3'-terminal phosphate cyclase, humanhuman

TSL 3

Gene RTCA, Length 683 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTCA-204ENST00000483474 IL16Q14005 1332 aa22.46■■□□□ 1.19
RTCA-204ENST00000483474 ZC3H4Q9UPT8 1303 aaKnown RBP22.46■■□□□ 1.19
RTCA-204ENST00000483474 SENP3-EIF4A1A0A087X0R7 540 aa22.45■■□□□ 1.18
RTCA-204ENST00000483474 GOLGA2Q08379 1002 aa22.45■■□□□ 1.18
RTCA-204ENST00000483474 TAOK3Q9H2K8 898 aa22.45■■□□□ 1.18
RTCA-204ENST00000483474 SALL2Q9Y467 1007 aaPredicted RBP22.45■■□□□ 1.18
RTCA-204ENST00000483474 NTSR2O95665 410 aa22.44■■□□□ 1.18
RTCA-204ENST00000483474 CCDC93Q567U6 631 aa22.44■■□□□ 1.18
RTCA-204ENST00000483474 RIC3Q7Z5B4 369 aa22.44■■□□□ 1.18
RTCA-204ENST00000483474 C8orf58Q8NAV2 365 aa22.44■■□□□ 1.18
RTCA-204ENST00000483474 RBM17Q96I25 401 aaKnown RBP22.44■■□□□ 1.18
RTCA-204ENST00000483474 TMX4Q9H1E5 349 aaPredicted RBP22.44■■□□□ 1.18
RTCA-204ENST00000483474 DICER1Q9UPY3 1922 aaKnown RBP22.44■■□□□ 1.18
RTCA-204ENST00000483474 RIC1Q4ADV7 1423 aa22.43■■□□□ 1.18
RTCA-204ENST00000483474 DDX58O95786 925 aaKnown RBP22.43■■□□□ 1.18
RTCA-204ENST00000483474 WDR63Q8IWG1 891 aa22.43■■□□□ 1.18
RTCA-204ENST00000483474 STK31Q9BXU1 1019 aa22.43■■□□□ 1.18
RTCA-204ENST00000483474 TRMT112Q9UI30 125 aaKnown RBP22.43■■□□□ 1.18
RTCA-204ENST00000483474 CRY2Q49AN0 593 aa22.42■■□□□ 1.18
RTCA-204ENST00000483474 NLRP10Q86W26 655 aa22.42■■□□□ 1.18
RTCA-204ENST00000483474 C16orf71Q8IYS4 520 aaPredicted RBP22.42■■□□□ 1.18
RTCA-204ENST00000483474 RTKN2Q8IZC4 609 aa22.42■■□□□ 1.18
RTCA-204ENST00000483474 TSR2Q969E8 191 aaKnown RBP22.42■■□□□ 1.18
RTCA-204ENST00000483474 ABCC12Q96J65 1359 aa22.41■■□□□ 1.18
RTCA-204ENST00000483474 LTBP3Q9NS15 1303 aa22.41■■□□□ 1.18
RTCA-204ENST00000483474 NFKBIEO00221 500 aa22.41■■□□□ 1.18
RTCA-204ENST00000483474 DPY19L2Q6NUT2 758 aa22.41■■□□□ 1.18
RTCA-204ENST00000483474 CACNA1FO60840 1977 aa22.41■■□□□ 1.18
RTCA-204ENST00000483474 SH3TC1Q8TE82 1336 aa22.4■■□□□ 1.18
RTCA-204ENST00000483474 SLC10A5Q5PT55 438 aa22.4■■□□□ 1.18
RTCA-204ENST00000483474 TNRC6CQ9HCJ0 1690 aaKnown RBP22.39■■□□□ 1.18
RTCA-204ENST00000483474 TWISTNBQ3B726 338 aaPredicted RBP22.39■■□□□ 1.17
RTCA-204ENST00000483474 GRIPAP1Q4V328 841 aa22.39■■□□□ 1.17
RTCA-204ENST00000483474 CC2D2BQ6DHV5 1058 aa22.39■■□□□ 1.17
RTCA-204ENST00000483474 CRAMP1Q96RY5 1269 aa22.39■■□□□ 1.17
RTCA-204ENST00000483474 TIAM2Q8IVF5 1701 aa22.38■■□□□ 1.17
RTCA-204ENST00000483474 HOXA10P31260 410 aaPredicted RBP22.38■■□□□ 1.17
RTCA-204ENST00000483474 HSP90B1P14625 803 aaKnown RBP22.37■■□□□ 1.17
RTCA-204ENST00000483474 TSPYL6Q8N831 410 aa22.37■■□□□ 1.17
RTCA-204ENST00000483474 C7orf43Q8WVR3 580 aa22.37■■□□□ 1.17
RTCA-204ENST00000483474 PHAXQ9H814 394 aaKnown RBP22.37■■□□□ 1.17
RTCA-204ENST00000483474 ATP5J2-PTCD1G3V325 749 aa22.36■■□□□ 1.17
RTCA-204ENST00000483474 FKBP4Q02790 459 aaKnown RBP eCLIP22.36■■□□□ 1.17
RTCA-204ENST00000483474 GLTPD2A6NH11 291 aa22.35■■□□□ 1.17
RTCA-204ENST00000483474 KIF3CO14782 793 aa22.35■■□□□ 1.17
RTCA-204ENST00000483474 ISCA1Q9BUE6 129 aa22.35■■□□□ 1.17
RTCA-204ENST00000483474 MYH16Q9H6N6 1097 aa22.35■■□□□ 1.17
RTCA-204ENST00000483474 NMRK2Q9NPI5 230 aa22.35■■□□□ 1.17
RTCA-204ENST00000483474 PPEF1O14829 653 aaPredicted RBP22.34■■□□□ 1.17
RTCA-204ENST00000483474 TOMM70O94826 608 aa22.34■■□□□ 1.17
RTCA-204ENST00000483474 HCLS1P14317 486 aaPredicted RBP22.34■■□□□ 1.17
RTCA-204ENST00000483474 TRIM28Q13263 835 aaKnown RBP22.34■■□□□ 1.17
RTCA-204ENST00000483474 DDX46Q7L014 1031 aaKnown RBP22.34■■□□□ 1.17
RTCA-204ENST00000483474 FANCIQ9NVI1 1328 aa22.33■■□□□ 1.17
RTCA-204ENST00000483474 LAMB2P55268 1798 aa22.33■■□□□ 1.17
RTCA-204ENST00000483474 NEXNQ0ZGT2 675 aa22.33■■□□□ 1.17
RTCA-204ENST00000483474 RRAGCQ9HB90 399 aa22.33■■□□□ 1.17
RTCA-204ENST00000483474 PRELPP51888 382 aa22.32■■□□□ 1.16
RTCA-204ENST00000483474 MYD88Q99836 296 aa22.32■■□□□ 1.16
RTCA-204ENST00000483474 TCERG1O14776 1098 aaKnown RBP22.31■■□□□ 1.16
RTCA-204ENST00000483474 BBOX1O75936 387 aa22.31■■□□□ 1.16
RTCA-204ENST00000483474 SLC4A2P04920 1241 aa22.31■■□□□ 1.16
RTCA-204ENST00000483474 VEGFAP15692 232 aaPredicted RBP22.31■■□□□ 1.16
RTCA-204ENST00000483474 SYNE4Q8N205 404 aa22.31■■□□□ 1.16
RTCA-204ENST00000483474 CCDC191Q8NCU4 936 aa22.31■■□□□ 1.16
RTCA-204ENST00000483474 FAM89AQ96GI7 184 aa22.31■■□□□ 1.16
RTCA-204ENST00000483474 KSR2Q6VAB6 950 aa22.3■■□□□ 1.16
RTCA-204ENST00000483474 JDP2Q8WYK2 163 aa22.3■■□□□ 1.16
RTCA-204ENST00000483474 PSMD1Q99460 953 aa22.3■■□□□ 1.16
RTCA-204ENST00000483474 METTL22Q9BUU2 404 aaPredicted RBP22.3■■□□□ 1.16
RTCA-204ENST00000483474 ZNF277Q9NRM2 450 aaPredicted RBP22.3■■□□□ 1.16
RTCA-204ENST00000483474 IARSP41252 1262 aaKnown RBP22.29■■□□□ 1.16
RTCA-204ENST00000483474 OLFM4Q6UX06 510 aa22.29■■□□□ 1.16
RTCA-204ENST00000483474 C3orf67Q6ZVT6 689 aa22.29■■□□□ 1.16
RTCA-204ENST00000483474 TMC4Q7Z404 712 aa22.29■■□□□ 1.16
RTCA-204ENST00000483474 ZBTB38Q8NAP3 1195 aaPredicted RBP22.29■■□□□ 1.16
RTCA-204ENST00000483474 ZNF428Q96B54 188 aa22.29■■□□□ 1.16
RTCA-204ENST00000483474 CWC25Q9NXE8 425 aaPredicted RBP22.29■■□□□ 1.16
RTCA-204ENST00000483474 MAP3K2Q9Y2U5 619 aa22.29■■□□□ 1.16
RTCA-204ENST00000483474 IRS4O14654 1257 aaPredicted RBP22.28■■□□□ 1.16
RTCA-204ENST00000483474 EXOSC9Q06265 439 aaKnown RBP22.28■■□□□ 1.16
RTCA-204ENST00000483474 RTL5Q5HYW3 569 aaPredicted RBP22.28■■□□□ 1.16
RTCA-204ENST00000483474 RBM46Q8TBY0 533 aaKnown RBP22.28■■□□□ 1.16
RTCA-204ENST00000483474 ATP6V0A2Q9Y487 856 aa22.28■■□□□ 1.16
RTCA-204ENST00000483474 DDX60Q8IY21 1712 aaKnown RBP22.28■■□□□ 1.16
RTCA-204ENST00000483474 ABCC4O15439 1325 aa22.28■■□□□ 1.16
RTCA-204ENST00000483474 PI4KAP2A4QPH2 592 aa22.27■■□□□ 1.16
RTCA-204ENST00000483474 PI4KAP1Q8N8J0 262 aa22.27■■□□□ 1.16
RTCA-204ENST00000483474 SUPT20HQ8NEM7 779 aa22.27■■□□□ 1.16
RTCA-204ENST00000483474 CCER2I3L3R5 266 aa22.26■■□□□ 1.15
RTCA-204ENST00000483474 GRAPQ13588 217 aa22.26■■□□□ 1.15
RTCA-204ENST00000483474 SP8Q8IXZ3 490 aa22.26■■□□□ 1.15
RTCA-204ENST00000483474 GRAPLQ8TC17 118 aaPredicted RBP22.26■■□□□ 1.15
RTCA-204ENST00000483474 VAMP4O75379 141 aa22.25■■□□□ 1.15
RTCA-204ENST00000483474 PCCAP05165 728 aaPredicted RBP22.25■■□□□ 1.15
RTCA-204ENST00000483474 FKBP5Q13451 457 aaPredicted RBP22.25■■□□□ 1.15
RTCA-204ENST00000483474 SF3B3Q15393 1217 aaKnown RBP22.25■■□□□ 1.15
RTCA-204ENST00000483474 TAF1P21675 1872 aa22.24■■□□□ 1.15
RTCA-204ENST00000483474 HSPA6P17066 643 aa22.24■■□□□ 1.15
RTCA-204ENST00000483474 FLIIQ13045 1269 aa22.24■■□□□ 1.15
Retrieved 100 of 20,778 RNA–protein pairs in 83.4 ms