RNA–Protein interactions for RNA: ENST00000483376.1

COL2A1-206, Transcript of collagen type II alpha 1 chain, humanhuman

TSL 5

Gene COL2A1, Length 641 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL2A1-206ENST00000483376 TCERG1O14776 1098 aaKnown RBP20.81■□□□□ 0.92
COL2A1-206ENST00000483376 SRGNP10124 158 aa20.81■□□□□ 0.92
COL2A1-206ENST00000483376 YBX3P16989 372 aaKnown RBP eCLIP20.81■□□□□ 0.92
COL2A1-206ENST00000483376 GTF2E1P29083 439 aaPredicted RBP20.81■□□□□ 0.92
COL2A1-206ENST00000483376 CHRNA5P30532 468 aa20.81■□□□□ 0.92
COL2A1-206ENST00000483376 CRY2Q49AN0 593 aa20.81■□□□□ 0.92
COL2A1-206ENST00000483376 C2CD5Q86YS7 1000 aa20.81■□□□□ 0.92
COL2A1-206ENST00000483376 PI4KAP1Q8N8J0 262 aa20.81■□□□□ 0.92
COL2A1-206ENST00000483376 CCDC191Q8NCU4 936 aa20.81■□□□□ 0.92
COL2A1-206ENST00000483376 STYK1Q6J9G0 422 aa20.8■□□□□ 0.92
COL2A1-206ENST00000483376 MAP3K2Q9Y2U5 619 aa20.8■□□□□ 0.92
COL2A1-206ENST00000483376 SH3TC1Q8TE82 1336 aa20.79■□□□□ 0.92
COL2A1-206ENST00000483376 BRPF1P55201 1214 aaPredicted RBP20.79■□□□□ 0.92
COL2A1-206ENST00000483376 ERFEQ4G0M1 354 aa20.79■□□□□ 0.92
COL2A1-206ENST00000483376 DALRD3Q5D0E6 543 aaKnown RBP20.79■□□□□ 0.92
COL2A1-206ENST00000483376 COL11A2P13942 1736 aaPredicted RBP20.78■□□□□ 0.92
COL2A1-206ENST00000483376 FAM177BA6PVY3 158 aa20.78■□□□□ 0.92
COL2A1-206ENST00000483376 FKBP5Q13451 457 aaPredicted RBP20.78■□□□□ 0.92
COL2A1-206ENST00000483376 NUTM1Q86Y26 1132 aa20.78■□□□□ 0.92
COL2A1-206ENST00000483376 CCDC24Q8N4L8 307 aa20.78■□□□□ 0.92
COL2A1-206ENST00000483376 MASTLQ96GX5 879 aa20.78■□□□□ 0.92
COL2A1-206ENST00000483376 ARFGEF1Q9Y6D6 1849 aa20.77■□□□□ 0.92
COL2A1-206ENST00000483376 ATP5J2-PTCD1G3V325 749 aa20.77■□□□□ 0.92
COL2A1-206ENST00000483376 NPR1P16066 1061 aa20.77■□□□□ 0.92
COL2A1-206ENST00000483376 NEXNQ0ZGT2 675 aa20.77■□□□□ 0.92
COL2A1-206ENST00000483376 MRPL50Q8N5N7 158 aaKnown RBP20.77■□□□□ 0.92
COL2A1-206ENST00000483376 TTLL6Q8N841 843 aa20.77■□□□□ 0.92
COL2A1-206ENST00000483376 DNAAF4Q8WXU2 420 aa20.77■□□□□ 0.92
COL2A1-206ENST00000483376 MYD88Q99836 296 aa20.77■□□□□ 0.92
COL2A1-206ENST00000483376 TRMT112Q9UI30 125 aaKnown RBP20.77■□□□□ 0.92
COL2A1-206ENST00000483376 IGKV5-2P06315 115 aa20.76■□□□□ 0.91
COL2A1-206ENST00000483376 HOXA10P31260 410 aaPredicted RBP20.76■□□□□ 0.91
COL2A1-206ENST00000483376 SSH1Q8WYL5 1049 aa20.76■□□□□ 0.91
COL2A1-206ENST00000483376 CNKSR1Q969H4 720 aa20.76■□□□□ 0.91
COL2A1-206ENST00000483376 CWC25Q9NXE8 425 aaPredicted RBP20.76■□□□□ 0.91
COL2A1-206ENST00000483376 BCS1LQ9Y276 419 aa20.76■□□□□ 0.91
COL2A1-206ENST00000483376 PTPRCP08575 1304 aa20.76■□□□□ 0.91
COL2A1-206ENST00000483376 TNRC6CQ9HCJ0 1690 aaKnown RBP20.75■□□□□ 0.91
COL2A1-206ENST00000483376 ZBTB38Q8NAP3 1195 aaPredicted RBP20.75■□□□□ 0.91
COL2A1-206ENST00000483376 PCCAP05165 728 aaPredicted RBP20.74■□□□□ 0.91
COL2A1-206ENST00000483376 HSP90B1P14625 803 aaKnown RBP20.74■□□□□ 0.91
COL2A1-206ENST00000483376 PELP1Q8IZL8 1130 aaKnown RBP20.74■□□□□ 0.91
COL2A1-206ENST00000483376 LINS1Q8NG48 757 aa20.74■□□□□ 0.91
COL2A1-206ENST00000483376 NLRP3Q96P20 1036 aa20.74■□□□□ 0.91
COL2A1-206ENST00000483376 NEURL1BA8MQ27 555 aa20.73■□□□□ 0.91
COL2A1-206ENST00000483376 ALDH1B1P30837 517 aa20.72■□□□□ 0.91
COL2A1-206ENST00000483376 ZNF622Q969S3 477 aaKnown RBP eCLIP20.72■□□□□ 0.91
COL2A1-206ENST00000483376 CDHR2Q9BYE9 1310 aa20.72■□□□□ 0.91
COL2A1-206ENST00000483376 RARSP54136 660 aaKnown RBP20.71■□□□□ 0.91
COL2A1-206ENST00000483376 FAM89AQ96GI7 184 aa20.71■□□□□ 0.91
COL2A1-206ENST00000483376 CRAMP1Q96RY5 1269 aa20.71■□□□□ 0.91
COL2A1-206ENST00000483376 LAMB2P55268 1798 aa20.7■□□□□ 0.9
COL2A1-206ENST00000483376 SF3B3Q15393 1217 aaKnown RBP20.7■□□□□ 0.9
COL2A1-206ENST00000483376 BEND3Q5T5X7 828 aa20.7■□□□□ 0.9
COL2A1-206ENST00000483376 SMC4Q9NTJ3 1288 aa20.7■□□□□ 0.9
COL2A1-206ENST00000483376 IRS4O14654 1257 aaPredicted RBP20.69■□□□□ 0.9
COL2A1-206ENST00000483376 GCKRQ14397 625 aa20.69■□□□□ 0.9
COL2A1-206ENST00000483376 SOGA3Q5TF21 947 aa20.69■□□□□ 0.9
COL2A1-206ENST00000483376 PRPF40BQ6NWY9 871 aaKnown RBP20.69■□□□□ 0.9
COL2A1-206ENST00000483376 C3orf67Q6ZVT6 689 aa20.69■□□□□ 0.9
COL2A1-206ENST00000483376 SYNE4Q8N205 404 aa20.69■□□□□ 0.9
COL2A1-206ENST00000483376 C7orf43Q8WVR3 580 aa20.69■□□□□ 0.9
COL2A1-206ENST00000483376 RPGRQ92834 1020 aaKnown RBP20.69■□□□□ 0.9
COL2A1-206ENST00000483376 DDX60Q8IY21 1712 aaKnown RBP20.69■□□□□ 0.9
COL2A1-206ENST00000483376 F6X3S4 739 aa20.68■□□□□ 0.9
COL2A1-206ENST00000483376 H7C1W4 665 aa20.68■□□□□ 0.9
COL2A1-206ENST00000483376 HCLS1P14317 486 aaPredicted RBP20.68■□□□□ 0.9
COL2A1-206ENST00000483376 CWF19L2Q2TBE0 894 aaKnown RBP20.68■□□□□ 0.9
COL2A1-206ENST00000483376 RBM17Q96I25 401 aaKnown RBP20.68■□□□□ 0.9
COL2A1-206ENST00000483376 WWC3Q9ULE0 1092 aa20.68■□□□□ 0.9
COL2A1-206ENST00000483376 KIF16BQ96L93 1317 aa20.68■□□□□ 0.9
COL2A1-206ENST00000483376 CHD4Q14839 1912 aa20.68■□□□□ 0.9
COL2A1-206ENST00000483376 ALDH1L1O75891 902 aa20.67■□□□□ 0.9
COL2A1-206ENST00000483376 ARHGAP45Q92619 1136 aa20.67■□□□□ 0.9
COL2A1-206ENST00000483376 PDE8AO60658 829 aa20.66■□□□□ 0.9
COL2A1-206ENST00000483376 PLA2G12BQ9BX93 195 aa20.66■□□□□ 0.9
COL2A1-206ENST00000483376 BCL2L13Q9BXK5 485 aa20.66■□□□□ 0.9
COL2A1-206ENST00000483376 SLX4Q8IY92 1834 aa20.66■□□□□ 0.9
COL2A1-206ENST00000483376 LTBP3Q9NS15 1303 aa20.65■□□□□ 0.9
COL2A1-206ENST00000483376 CASP7P55210 303 aa20.65■□□□□ 0.9
COL2A1-206ENST00000483376 GRIPAP1Q4V328 841 aa20.65■□□□□ 0.9
COL2A1-206ENST00000483376 CC2D2BQ6DHV5 1058 aa20.65■□□□□ 0.9
COL2A1-206ENST00000483376 SNED1Q8TER0 1413 aa20.64■□□□□ 0.89
COL2A1-206ENST00000483376 SRCIN1Q9C0H9 1055 aa20.64■□□□□ 0.89
COL2A1-206ENST00000483376 RTL9Q8NET4 1388 aa20.63■□□□□ 0.89
COL2A1-206ENST00000483376 ABCC4O15439 1325 aa20.63■□□□□ 0.89
COL2A1-206ENST00000483376 BBOX1O75936 387 aa20.63■□□□□ 0.89
COL2A1-206ENST00000483376 ARHGAP27Q6ZUM4 889 aa20.63■□□□□ 0.89
COL2A1-206ENST00000483376 DDX46Q7L014 1031 aaKnown RBP20.63■□□□□ 0.89
COL2A1-206ENST00000483376 TMC4Q7Z404 712 aa20.63■□□□□ 0.89
COL2A1-206ENST00000483376 API5Q9BZZ5 524 aaKnown RBP20.63■□□□□ 0.89
COL2A1-206ENST00000483376 UTYO14607 1347 aa20.62■□□□□ 0.89
COL2A1-206ENST00000483376 C21orf2O43822 256 aa20.62■□□□□ 0.89
COL2A1-206ENST00000483376 GRAPQ13588 217 aa20.62■□□□□ 0.89
COL2A1-206ENST00000483376 CCDC93Q567U6 631 aa20.62■□□□□ 0.89
COL2A1-206ENST00000483376 GRAPLQ8TC17 118 aaPredicted RBP20.62■□□□□ 0.89
COL2A1-206ENST00000483376 NOB1Q9ULX3 412 aaKnown RBP20.62■□□□□ 0.89
COL2A1-206ENST00000483376 NFKBIEO00221 500 aa20.61■□□□□ 0.89
COL2A1-206ENST00000483376 GRM8O00222 908 aa20.61■□□□□ 0.89
COL2A1-206ENST00000483376 CCDC152Q4G0S7 254 aa20.61■□□□□ 0.89
Retrieved 100 of 20,778 RNA–protein pairs in 110.7 ms