RNA–Protein interactions for RNA: ENST00000483359.5

CPNE1-224, Transcript of copine 1, humanhuman

TSL 5

Gene CPNE1, Length 1,975 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-224ENST00000483359 NEURL1BA8MQ27 555 aa22.62■■□□□ 1.21
CPNE1-224ENST00000483359 TRMT112Q9UI30 125 aaKnown RBP22.62■■□□□ 1.21
CPNE1-224ENST00000483359 NTSR2O95665 410 aa22.61■■□□□ 1.21
CPNE1-224ENST00000483359 PPP1R42Q7Z4L9 355 aa22.61■■□□□ 1.21
CPNE1-224ENST00000483359 LINS1Q8NG48 757 aa22.61■■□□□ 1.21
CPNE1-224ENST00000483359 ARHGAP45Q92619 1136 aa22.61■■□□□ 1.21
CPNE1-224ENST00000483359 UTP14AQ9BVJ6 771 aaKnown RBP22.61■■□□□ 1.21
CPNE1-224ENST00000483359 CWC25Q9NXE8 425 aaPredicted RBP22.61■■□□□ 1.21
CPNE1-224ENST00000483359 TPTE2Q6XPS3 522 aa22.61■■□□□ 1.21
CPNE1-224ENST00000483359 JARID2Q92833 1246 aaPredicted RBP22.61■■□□□ 1.21
CPNE1-224ENST00000483359 PXDNLA1KZ92 1463 aa22.61■■□□□ 1.21
CPNE1-224ENST00000483359 ERFEQ4G0M1 354 aa22.6■■□□□ 1.21
CPNE1-224ENST00000483359 SYNE4Q8N205 404 aa22.6■■□□□ 1.21
CPNE1-224ENST00000483359 CCDC191Q8NCU4 936 aa22.6■■□□□ 1.21
CPNE1-224ENST00000483359 SRCIN1Q9C0H9 1055 aa22.6■■□□□ 1.21
CPNE1-224ENST00000483359 NYXQ9GZU5 481 aa22.6■■□□□ 1.21
CPNE1-224ENST00000483359 ABCC12Q96J65 1359 aa22.6■■□□□ 1.21
CPNE1-224ENST00000483359 FAM89AQ96GI7 184 aa22.59■■□□□ 1.21
CPNE1-224ENST00000483359 C10orf71Q711Q0 1435 aa22.59■■□□□ 1.21
CPNE1-224ENST00000483359 ST5P78524 1137 aa22.59■■□□□ 1.21
CPNE1-224ENST00000483359 TRIM28Q13263 835 aaKnown RBP22.59■■□□□ 1.21
CPNE1-224ENST00000483359 FTSJ3Q8IY81 847 aaKnown RBP22.59■■□□□ 1.21
CPNE1-224ENST00000483359 ABCC4O15439 1325 aa22.59■■□□□ 1.21
CPNE1-224ENST00000483359 IBTKQ9P2D0 1353 aaPredicted RBP22.58■■□□□ 1.21
CPNE1-224ENST00000483359 GCKRQ14397 625 aa22.58■■□□□ 1.2
CPNE1-224ENST00000483359 N4BP2Q86UW6 1770 aaPredicted RBP22.57■■□□□ 1.2
CPNE1-224ENST00000483359 TNRC6CQ9HCJ0 1690 aaKnown RBP22.57■■□□□ 1.2
CPNE1-224ENST00000483359 GOLGB1Q14789 3259 aaKnown RBP22.57■■□□□ 1.2
CPNE1-224ENST00000483359 FHDC1Q9C0D6 1143 aaPredicted RBP22.57■■□□□ 1.2
CPNE1-224ENST00000483359 SH3TC1Q8TE82 1336 aa22.57■■□□□ 1.2
CPNE1-224ENST00000483359 ANKRD31Q8N7Z5 1873 aa22.56■■□□□ 1.2
CPNE1-224ENST00000483359 RLBP1P12271 317 aa22.56■■□□□ 1.2
CPNE1-224ENST00000483359 UBE3BQ7Z3V4 1068 aa22.56■■□□□ 1.2
CPNE1-224ENST00000483359 DZIP1LQ8IYY4 767 aaKnown RBP22.56■■□□□ 1.2
CPNE1-224ENST00000483359 TMEM57Q8N5G2 664 aa22.55■■□□□ 1.2
CPNE1-224ENST00000483359 ZBTB38Q8NAP3 1195 aaPredicted RBP22.55■■□□□ 1.2
CPNE1-224ENST00000483359 PANK1Q8TE04 598 aa22.55■■□□□ 1.2
CPNE1-224ENST00000483359 ALDH1L1O75891 902 aa22.54■■□□□ 1.2
CPNE1-224ENST00000483359 HCLS1P14317 486 aaPredicted RBP22.54■■□□□ 1.2
CPNE1-224ENST00000483359 CCT4P50991 539 aaKnown RBP22.54■■□□□ 1.2
CPNE1-224ENST00000483359 KIF13BQ9NQT8 1826 aa22.54■■□□□ 1.2
CPNE1-224ENST00000483359 GOLGA6L2Q8N9W4 650 aaPredicted RBP22.54■■□□□ 1.2
CPNE1-224ENST00000483359 C9orf78Q9NZ63 289 aaPredicted RBP22.54■■□□□ 1.2
CPNE1-224ENST00000483359 DDX60Q8IY21 1712 aaKnown RBP22.54■■□□□ 1.2
CPNE1-224ENST00000483359 PCCAP05165 728 aaPredicted RBP22.53■■□□□ 1.2
CPNE1-224ENST00000483359 RRP1P56182 461 aaKnown RBP22.53■■□□□ 1.2
CPNE1-224ENST00000483359 RNF123Q5XPI4 1314 aa22.53■■□□□ 1.2
CPNE1-224ENST00000483359 C20orf194Q5TEA3 1177 aa22.52■■□□□ 1.2
CPNE1-224ENST00000483359 GRM8O00222 908 aa22.52■■□□□ 1.2
CPNE1-224ENST00000483359 IRS4O14654 1257 aaPredicted RBP22.52■■□□□ 1.2
CPNE1-224ENST00000483359 NLGN2Q8NFZ4 835 aa22.52■■□□□ 1.2
CPNE1-224ENST00000483359 BRIP1Q9BX63 1249 aa22.52■■□□□ 1.2
CPNE1-224ENST00000483359 WWC3Q9ULE0 1092 aa22.52■■□□□ 1.2
CPNE1-224ENST00000483359 INTS3Q68E01 1043 aaKnown RBP22.51■■□□□ 1.19
CPNE1-224ENST00000483359 C3orf67Q6ZVT6 689 aa22.51■■□□□ 1.19
CPNE1-224ENST00000483359 ITPRIPQ8IWB1 547 aa22.51■■□□□ 1.19
CPNE1-224ENST00000483359 CD2APQ9Y5K6 639 aa22.51■■□□□ 1.19
CPNE1-224ENST00000483359 LAMB2P55268 1798 aa22.51■■□□□ 1.19
CPNE1-224ENST00000483359 COL11A2P13942 1736 aaPredicted RBP22.51■■□□□ 1.19
CPNE1-224ENST00000483359 NBPF7P0C2Y1 421 aaPredicted RBP22.5■■□□□ 1.19
CPNE1-224ENST00000483359 CHRNA5P30532 468 aa22.5■■□□□ 1.19
CPNE1-224ENST00000483359 SUPT16HQ9Y5B9 1047 aaKnown RBP22.5■■□□□ 1.19
CPNE1-224ENST00000483359 H7C1W4 665 aa22.5■■□□□ 1.19
CPNE1-224ENST00000483359 SYT17Q9BSW7 474 aa22.5■■□□□ 1.19
CPNE1-224ENST00000483359 KIAA1551Q9HCM1 1747 aa22.49■■□□□ 1.19
CPNE1-224ENST00000483359 A0A0G2JLW4 131 aa22.49■■□□□ 1.19
CPNE1-224ENST00000483359 PDE6BP35913 854 aa22.49■■□□□ 1.19
CPNE1-224ENST00000483359 USP44Q9H0E7 712 aa22.49■■□□□ 1.19
CPNE1-224ENST00000483359 CASP7P55210 303 aa22.48■■□□□ 1.19
CPNE1-224ENST00000483359 C2CD5Q86YS7 1000 aa22.48■■□□□ 1.19
CPNE1-224ENST00000483359 NLRP3Q96P20 1036 aa22.48■■□□□ 1.19
CPNE1-224ENST00000483359 MEIS3Q99687 375 aa22.48■■□□□ 1.19
CPNE1-224ENST00000483359 COG6Q9Y2V7 657 aa22.48■■□□□ 1.19
CPNE1-224ENST00000483359 CDHR2Q9BYE9 1310 aa22.48■■□□□ 1.19
CPNE1-224ENST00000483359 DPEP1P16444 411 aa22.47■■□□□ 1.19
CPNE1-224ENST00000483359 CCDC85AQ96PX6 553 aaPredicted RBP22.47■■□□□ 1.19
CPNE1-224ENST00000483359 RIC1Q4ADV7 1423 aa22.47■■□□□ 1.19
CPNE1-224ENST00000483359 MS4A1P11836 297 aa22.47■■□□□ 1.19
CPNE1-224ENST00000483359 SLC10A5Q5PT55 438 aa22.47■■□□□ 1.19
CPNE1-224ENST00000483359 H0YIN7 160 aa22.45■■□□□ 1.18
CPNE1-224ENST00000483359 TGFB2P61812 414 aa22.45■■□□□ 1.18
CPNE1-224ENST00000483359 SUCLG2Q96I99 432 aa22.45■■□□□ 1.18
CPNE1-224ENST00000483359 PDE8AO60658 829 aa22.45■■□□□ 1.18
CPNE1-224ENST00000483359 UBTFL1P0CB47 393 aaPredicted RBP22.44■■□□□ 1.18
CPNE1-224ENST00000483359 ZNF622Q969S3 477 aaKnown RBP eCLIP22.44■■□□□ 1.184e-6■■□□□ 12.1
CPNE1-224ENST00000483359 MYH3P11055 1940 aa22.44■■□□□ 1.18
CPNE1-224ENST00000483359 UTYO14607 1347 aa22.44■■□□□ 1.18
CPNE1-224ENST00000483359 DLEC1Q9Y238 1755 aa22.43■■□□□ 1.18
CPNE1-224ENST00000483359 CENPBP07199 599 aaPredicted RBP22.43■■□□□ 1.18
CPNE1-224ENST00000483359 SRGNP10124 158 aa22.43■■□□□ 1.18
CPNE1-224ENST00000483359 PDE3AQ14432 1141 aa22.43■■□□□ 1.18
CPNE1-224ENST00000483359 MVPQ14764 893 aaKnown RBP22.43■■□□□ 1.18
CPNE1-224ENST00000483359 RPGRQ92834 1020 aaKnown RBP22.43■■□□□ 1.18
CPNE1-224ENST00000483359 CACNA1SQ13698 1873 aa22.43■■□□□ 1.18
CPNE1-224ENST00000483359 UTRNP46939 3433 aa22.43■■□□□ 1.18
CPNE1-224ENST00000483359 CTSWP56202 376 aa22.43■■□□□ 1.18
CPNE1-224ENST00000483359 CRY2Q49AN0 593 aa22.43■■□□□ 1.18
CPNE1-224ENST00000483359 EPHA10Q5JZY3 1008 aa22.43■■□□□ 1.18
CPNE1-224ENST00000483359 KLRG2A4D1S0 409 aaPredicted RBP22.42■■□□□ 1.18
CPNE1-224ENST00000483359 HSP90B1P14625 803 aaKnown RBP22.42■■□□□ 1.18
Retrieved 100 of 20,778 RNA–protein pairs in 76.3 ms