RNA–Protein interactions for RNA: ENST00000483293.1

PMS1-219, Transcript of PMS1 homolog 1, mismatch repair system component, humanhuman

TSL 5

Gene PMS1, Length 663 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PMS1-219ENST00000483293 PODXL2Q9NZ53 605 aa10.16□□□□□ -0.78
PMS1-219ENST00000483293 OPLAHO14841 1288 aa10.15□□□□□ -0.78
PMS1-219ENST00000483293 DNM1Q05193 864 aaKnown RBP10.15□□□□□ -0.78
PMS1-219ENST00000483293 HIF1AQ16665 826 aa10.15□□□□□ -0.78
PMS1-219ENST00000483293 SV2AQ7L0J3 742 aa10.15□□□□□ -0.78
PMS1-219ENST00000483293 NLRP8Q86W28 1048 aa10.15□□□□□ -0.78
PMS1-219ENST00000483293 RGL4Q8IZJ4 473 aa10.15□□□□□ -0.78
PMS1-219ENST00000483293 CCDC87Q9NVE4 849 aa10.15□□□□□ -0.78
PMS1-219ENST00000483293 DMGDHQ9UI17 866 aaKnown RBP10.15□□□□□ -0.78
PMS1-219ENST00000483293 BNIP3LO60238 219 aa10.14□□□□□ -0.79
PMS1-219ENST00000483293 SFSWAPQ12872 951 aaKnown RBP10.14□□□□□ -0.79
PMS1-219ENST00000483293 SND1Q7KZF4 910 aaKnown RBP eCLIP10.14□□□□□ -0.79
PMS1-219ENST00000483293 CMTR1Q8N1G2 835 aaKnown RBP10.14□□□□□ -0.79
PMS1-219ENST00000483293 GPC6Q9Y625 555 aaPredicted RBP10.14□□□□□ -0.79
PMS1-219ENST00000483293 KRTAP9-6A0A140TA67 174 aa10.13□□□□□ -0.79
PMS1-219ENST00000483293 ARHGAP4P98171 946 aa10.13□□□□□ -0.79
PMS1-219ENST00000483293 UBAP2LQ14157 1087 aaKnown RBP10.13□□□□□ -0.79
PMS1-219ENST00000483293 GRIN2CQ14957 1233 aa10.13□□□□□ -0.79
PMS1-219ENST00000483293 TMCO4Q5TGY1 634 aa10.13□□□□□ -0.79
PMS1-219ENST00000483293 EDEM1Q92611 657 aa10.13□□□□□ -0.79
PMS1-219ENST00000483293 BRD7Q9NPI1 651 aa10.13□□□□□ -0.79
PMS1-219ENST00000483293 PCDHGC4Q9Y5F7 938 aa10.13□□□□□ -0.79
PMS1-219ENST00000483293 TYRO3Q06418 890 aa10.12□□□□□ -0.79
PMS1-219ENST00000483293 FIGNL1Q6PIW4 674 aa10.12□□□□□ -0.79
PMS1-219ENST00000483293 GPR161Q8N6U8 529 aaKnown RBP10.12□□□□□ -0.79
PMS1-219ENST00000483293 STRN4Q9NRL3 753 aa10.12□□□□□ -0.79
PMS1-219ENST00000483293 MAPTP10636 758 aaKnown RBP10.11□□□□□ -0.79
PMS1-219ENST00000483293 NPR3P17342 541 aa10.11□□□□□ -0.79
PMS1-219ENST00000483293 ARSDP51689 593 aa10.11□□□□□ -0.79
PMS1-219ENST00000483293 LBRQ14739 615 aaKnown RBP10.11□□□□□ -0.79
PMS1-219ENST00000483293 ALKBH2Q6NS38 261 aa10.11□□□□□ -0.79
PMS1-219ENST00000483293 POLIQ9UNA4 740 aa10.11□□□□□ -0.79
PMS1-219ENST00000483293 RTCBQ9Y3I0 505 aaKnown RBP10.11□□□□□ -0.79
PMS1-219ENST00000483293 FZD6O60353 706 aa10.1□□□□□ -0.79
PMS1-219ENST00000483293 CD33P20138 364 aa10.1□□□□□ -0.79
PMS1-219ENST00000483293 INPP5BP32019 993 aa10.1□□□□□ -0.79
PMS1-219ENST00000483293 IRS1P35568 1242 aa10.1□□□□□ -0.79
PMS1-219ENST00000483293 TNP2Q05952 138 aa10.1□□□□□ -0.79
PMS1-219ENST00000483293 IER5Q5VY09 327 aa10.1□□□□□ -0.79
PMS1-219ENST00000483293 FOXR1Q6PIV2 292 aa10.1□□□□□ -0.79
PMS1-219ENST00000483293 TMC1Q8TDI8 760 aa10.1□□□□□ -0.79
PMS1-219ENST00000483293 HCN2Q9UL51 889 aa10.1□□□□□ -0.79
PMS1-219ENST00000483293 BRPF3Q9ULD4 1205 aa10.1□□□□□ -0.79
PMS1-219ENST00000483293 A6NHS1 94 aa10.09□□□□□ -0.79
PMS1-219ENST00000483293 MAPK1P28482 360 aa10.09□□□□□ -0.79
PMS1-219ENST00000483293 C8orf34Q49A92 452 aa10.09□□□□□ -0.79
PMS1-219ENST00000483293 PIK3R5Q8WYR1 880 aa10.09□□□□□ -0.79
PMS1-219ENST00000483293 NUDT16Q96DE0 195 aaKnown RBP10.09□□□□□ -0.79
PMS1-219ENST00000483293 TRERF1Q96PN7 1200 aa10.09□□□□□ -0.79
PMS1-219ENST00000483293 ADAM23O75077 832 aa10.08□□□□□ -0.8
PMS1-219ENST00000483293 MARSP56192 900 aaKnown RBP10.08□□□□□ -0.8
PMS1-219ENST00000483293 CTBSQ01459 385 aa10.08□□□□□ -0.8
PMS1-219ENST00000483293 CCDC27Q2M243 656 aa10.08□□□□□ -0.8
PMS1-219ENST00000483293 SAMD5Q5TGI4 173 aa10.08□□□□□ -0.8
PMS1-219ENST00000483293 KRT25Q7Z3Z0 450 aa10.08□□□□□ -0.8
PMS1-219ENST00000483293 GMCL1Q96IK5 515 aa10.08□□□□□ -0.8
PMS1-219ENST00000483293 PSMG3-AS1Q96PY0 264 aa10.08□□□□□ -0.8
PMS1-219ENST00000483293 KCNH4Q9UQ05 1017 aa10.08□□□□□ -0.8
PMS1-219ENST00000483293 PDGFAP04085 211 aa10.07□□□□□ -0.8
PMS1-219ENST00000483293 GRNP28799 593 aaKnown RBP10.07□□□□□ -0.8
PMS1-219ENST00000483293 ZNF385CQ66K41 422 aaPredicted RBP10.07□□□□□ -0.8
PMS1-219ENST00000483293 NANOS1Q8WY41 292 aaKnown RBP10.07□□□□□ -0.8
PMS1-219ENST00000483293 CNTNAP3BQ96NU0 1288 aa10.07□□□□□ -0.8
PMS1-219ENST00000483293 CNTNAP3Q9BZ76 1288 aa10.07□□□□□ -0.8
PMS1-219ENST00000483293 NDFIP2Q9NV92 336 aa10.07□□□□□ -0.8
PMS1-219ENST00000483293 FAM157BP0CG42 384 aa10.06□□□□□ -0.8
PMS1-219ENST00000483293 FGFR3P22607 806 aa10.06□□□□□ -0.8
PMS1-219ENST00000483293 MZF1P28698 734 aaPredicted RBP10.06□□□□□ -0.8
PMS1-219ENST00000483293 RAB44Q7Z6P3 723 aaPredicted RBP10.06□□□□□ -0.8
PMS1-219ENST00000483293 TTC16Q8NEE8 873 aa10.06□□□□□ -0.8
PMS1-219ENST00000483293 GGNBP2Q9H3C7 697 aa10.06□□□□□ -0.8
PMS1-219ENST00000483293 MARK1Q9P0L2 795 aa10.06□□□□□ -0.8
PMS1-219ENST00000483293 UBAP1LF5GYI3 381 aa10.05□□□□□ -0.8
PMS1-219ENST00000483293 EFSO43281 561 aa10.05□□□□□ -0.8
PMS1-219ENST00000483293 NDUFB5O43674 189 aa10.05□□□□□ -0.8
PMS1-219ENST00000483293 EPB42P16452 691 aa10.05□□□□□ -0.8
PMS1-219ENST00000483293 PCSK2P16519 638 aa10.05□□□□□ -0.8
PMS1-219ENST00000483293 FAM13BQ9NYF5 915 aa10.05□□□□□ -0.8
PMS1-219ENST00000483293 DCTN4Q9UJW0 460 aa10.05□□□□□ -0.8
PMS1-219ENST00000483293 ATXN7L1Q9ULK2 861 aaPredicted RBP10.05□□□□□ -0.8
PMS1-219ENST00000483293 PHF24Q9UPV7 400 aa10.05□□□□□ -0.8
PMS1-219ENST00000483293 XYLBO75191 536 aa10.04□□□□□ -0.8
PMS1-219ENST00000483293 SASH3O75995 380 aa10.04□□□□□ -0.8
PMS1-219ENST00000483293 MFAP1P55081 439 aaKnown RBP10.04□□□□□ -0.8
PMS1-219ENST00000483293 SLC30A3Q99726 388 aa10.04□□□□□ -0.8
PMS1-219ENST00000483293 TRIP4Q15650 581 aaPredicted RBP10.03□□□□□ -0.8
PMS1-219ENST00000483293 CFHR5Q9BXR6 569 aa10.03□□□□□ -0.8
PMS1-219ENST00000483293 COL25A1Q9BXS0 654 aaPredicted RBP10.03□□□□□ -0.8
PMS1-219ENST00000483293 KCNMB2Q9Y691 235 aa10.03□□□□□ -0.8
PMS1-219ENST00000483293 TARSP26639 723 aaKnown RBP10.02□□□□□ -0.81
PMS1-219ENST00000483293 GAS6Q14393 721 aa10.02□□□□□ -0.81
PMS1-219ENST00000483293 BHMTQ93088 406 aa10.02□□□□□ -0.81
PMS1-219ENST00000483293 PRR12Q9ULL5 1215 aa10.02□□□□□ -0.81
PMS1-219ENST00000483293 C2CD2LO14523 706 aa10.01□□□□□ -0.81
PMS1-219ENST00000483293 ARHGEF15O94989 841 aa10.01□□□□□ -0.81
PMS1-219ENST00000483293 BMP4P12644 408 aa10.01□□□□□ -0.81
PMS1-219ENST00000483293 MX2P20592 715 aa10.01□□□□□ -0.81
PMS1-219ENST00000483293 SPEM2Q0P670 501 aa10.01□□□□□ -0.81
PMS1-219ENST00000483293 RNFT1Q5M7Z0 435 aa10.01□□□□□ -0.81
PMS1-219ENST00000483293 KANK3Q6NY19 840 aa10.01□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 14.7 ms