RNA–Protein interactions for RNA: ENST00000482000.1

PRKCB-206, Transcript of protein kinase C beta, humanhuman

TSL 3

Gene PRKCB, Length 541 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCB-206ENST00000482000 IGFBP4P22692 258 aa7.87□□□□□ -1.15
PRKCB-206ENST00000482000 SSFA2P28290 1259 aa7.87□□□□□ -1.15
PRKCB-206ENST00000482000 SLC9A9Q8IVB4 645 aa7.87□□□□□ -1.15
PRKCB-206ENST00000482000 PRIMPOLQ96LW4 560 aa7.87□□□□□ -1.15
PRKCB-206ENST00000482000 CFDP1Q9UEE9 299 aaPredicted RBP7.87□□□□□ -1.15
PRKCB-206ENST00000482000 A2MP01023 1474 aa7.87□□□□□ -1.15
PRKCB-206ENST00000482000 SPAG9O60271 1321 aaKnown RBP7.86□□□□□ -1.15
PRKCB-206ENST00000482000 ZNF644Q9H582 1327 aaPredicted RBP7.86□□□□□ -1.15
PRKCB-206ENST00000482000 PRMT3O60678 531 aa7.86□□□□□ -1.15
PRKCB-206ENST00000482000 TBCELQ5QJ74 424 aa7.86□□□□□ -1.15
PRKCB-206ENST00000482000 PHLDB3Q6NSJ2 640 aa7.86□□□□□ -1.15
PRKCB-206ENST00000482000 TMEM214Q6NUQ4 689 aaKnown RBP7.86□□□□□ -1.15
PRKCB-206ENST00000482000 POTEAQ6S8J7 498 aa7.86□□□□□ -1.15
PRKCB-206ENST00000482000 FBXO41Q8TF61 875 aa7.86□□□□□ -1.15
PRKCB-206ENST00000482000 SCG3Q8WXD2 468 aaKnown RBP7.86□□□□□ -1.15
PRKCB-206ENST00000482000 CXXC1Q9P0U4 656 aaPredicted RBP7.86□□□□□ -1.15
PRKCB-206ENST00000482000 UHRF1BP1Q6BDS2 1440 aa7.86□□□□□ -1.15
PRKCB-206ENST00000482000 CNTLNQ9NXG0 1405 aa7.86□□□□□ -1.15
PRKCB-206ENST00000482000 ZNF142P52746 1687 aaPredicted RBP7.86□□□□□ -1.15
PRKCB-206ENST00000482000 ATP2B4P23634 1241 aa7.85□□□□□ -1.15
PRKCB-206ENST00000482000 TEAD4Q15561 434 aa7.85□□□□□ -1.15
PRKCB-206ENST00000482000 LYSMD3Q7Z3D4 306 aa7.85□□□□□ -1.15
PRKCB-206ENST00000482000 STAG2Q8N3U4 1231 aa7.85□□□□□ -1.15
PRKCB-206ENST00000482000 NBPF15Q8N660 670 aa7.85□□□□□ -1.15
PRKCB-206ENST00000482000 C1orf216Q8TAB5 229 aa7.85□□□□□ -1.15
PRKCB-206ENST00000482000 RHBDD1Q8TEB9 315 aa7.85□□□□□ -1.15
PRKCB-206ENST00000482000 SENP2Q9HC62 589 aa7.85□□□□□ -1.15
PRKCB-206ENST00000482000 GMPR2Q9P2T1 348 aaKnown RBP7.85□□□□□ -1.15
PRKCB-206ENST00000482000 DNMT3LQ9UJW3 386 aa7.85□□□□□ -1.15
PRKCB-206ENST00000482000 NCOA2Q15596 1464 aa7.85□□□□□ -1.15
PRKCB-206ENST00000482000 CAMSAP2Q08AD1 1489 aa7.84□□□□□ -1.15
PRKCB-206ENST00000482000 FIGNL2A6NMB9 653 aa7.84□□□□□ -1.15
PRKCB-206ENST00000482000 BRD1O95696 1058 aa7.84□□□□□ -1.15
PRKCB-206ENST00000482000 POU4F2Q12837 409 aa7.84□□□□□ -1.15
PRKCB-206ENST00000482000 WDR44Q5JSH3 913 aa7.84□□□□□ -1.15
PRKCB-206ENST00000482000 TAS1R3Q7RTX0 852 aa7.84□□□□□ -1.15
PRKCB-206ENST00000482000 PRICKLE2Q7Z3G6 844 aa7.84□□□□□ -1.15
PRKCB-206ENST00000482000 ZDHHC1Q8WTX9 485 aa7.84□□□□□ -1.15
PRKCB-206ENST00000482000 KIFC2Q96AC6 838 aa7.84□□□□□ -1.15
PRKCB-206ENST00000482000 TRIM47Q96LD4 638 aa7.84□□□□□ -1.15
PRKCB-206ENST00000482000 C2orf49Q9BVC5 232 aaPredicted RBP7.84□□□□□ -1.15
PRKCB-206ENST00000482000 MYO3AQ8NEV4 1616 aa7.84□□□□□ -1.15
PRKCB-206ENST00000482000 NPATQ14207 1427 aa7.84□□□□□ -1.15
PRKCB-206ENST00000482000 VPS8Q8N3P4 1428 aa7.84□□□□□ -1.15
PRKCB-206ENST00000482000 FOXO3O43524 673 aa7.83□□□□□ -1.16
PRKCB-206ENST00000482000 PPP1R12BO60237 982 aaPredicted RBP7.83□□□□□ -1.16
PRKCB-206ENST00000482000 GTF2E1P29083 439 aaPredicted RBP7.83□□□□□ -1.16
PRKCB-206ENST00000482000 NOS2P35228 1153 aa7.83□□□□□ -1.16
PRKCB-206ENST00000482000 PSMA6P60900 246 aaKnown RBP7.83□□□□□ -1.16
PRKCB-206ENST00000482000 FKBP5Q13451 457 aaPredicted RBP7.83□□□□□ -1.16
PRKCB-206ENST00000482000 C4orf17Q53FE4 359 aa7.83□□□□□ -1.16
PRKCB-206ENST00000482000 GNASQ5JWF2 1037 aa7.83□□□□□ -1.16
PRKCB-206ENST00000482000 NIFKQ9BYG3 293 aaKnown RBP7.83□□□□□ -1.16
PRKCB-206ENST00000482000 CABP1Q9NZU7 370 aa7.83□□□□□ -1.16
PRKCB-206ENST00000482000 RTEL1-TNFRSF6BF6WH68 1400 aa7.83□□□□□ -1.16
PRKCB-206ENST00000482000 ARHGEF5Q12774 1597 aa7.83□□□□□ -1.16
PRKCB-206ENST00000482000 ZMYM3Q14202 1370 aa7.83□□□□□ -1.16
PRKCB-206ENST00000482000 CCDC141Q6ZP82 1450 aa7.82□□□□□ -1.16
PRKCB-206ENST00000482000 LRRC9Q6ZRR7 1453 aa7.82□□□□□ -1.16
PRKCB-206ENST00000482000 LOC105371045A0A1W2PR82 267 aa7.82□□□□□ -1.16
PRKCB-206ENST00000482000 ZNF800Q2TB10 664 aaPredicted RBP eCLIP7.82□□□□□ -1.165e-7■□□□□ 8.1
PRKCB-206ENST00000482000 NBPF10Q6P3W6 841 aaKnown RBP7.82□□□□□ -1.16
PRKCB-206ENST00000482000 MAP3K1Q13233 1512 aa7.82□□□□□ -1.16
PRKCB-206ENST00000482000 CEP170BQ9Y4F5 1589 aaPredicted RBP7.81□□□□□ -1.16
PRKCB-206ENST00000482000 PTPRKQ15262 1439 aa7.81□□□□□ -1.16
PRKCB-206ENST00000482000 NCOA1Q15788 1441 aa7.81□□□□□ -1.16
PRKCB-206ENST00000482000 SERTM1A2A2V5 107 aa7.81□□□□□ -1.16
PRKCB-206ENST00000482000 EML1O00423 815 aa7.81□□□□□ -1.16
PRKCB-206ENST00000482000 MAN1A2O60476 641 aa7.81□□□□□ -1.16
PRKCB-206ENST00000482000 HIRAP54198 1017 aaPredicted RBP7.81□□□□□ -1.16
PRKCB-206ENST00000482000 B4GALNT3Q6L9W6 998 aa7.81□□□□□ -1.16
PRKCB-206ENST00000482000 L3MBTL2Q969R5 705 aa7.81□□□□□ -1.16
PRKCB-206ENST00000482000 PARP3Q9Y6F1 533 aa7.81□□□□□ -1.16
PRKCB-206ENST00000482000 CAMSAP1Q5T5Y3 1602 aa7.81□□□□□ -1.16
PRKCB-206ENST00000482000 PTPRTO14522 1441 aa7.8□□□□□ -1.16
PRKCB-206ENST00000482000 SOBPA7XYQ1 873 aa7.8□□□□□ -1.16
PRKCB-206ENST00000482000 PHKA2P46019 1235 aa7.8□□□□□ -1.16
PRKCB-206ENST00000482000 SH3PXD2AQ5TCZ1 1133 aa7.8□□□□□ -1.16
PRKCB-206ENST00000482000 COL26A1Q96A83 441 aa7.8□□□□□ -1.16
PRKCB-206ENST00000482000 CHMP3Q9Y3E7 222 aa7.8□□□□□ -1.16
PRKCB-206ENST00000482000 LTBP4Q8N2S1 1624 aa7.8□□□□□ -1.16
PRKCB-206ENST00000482000 MAST1Q9Y2H9 1570 aa7.8□□□□□ -1.16
PRKCB-206ENST00000482000 RNF17Q9BXT8 1623 aaKnown RBP7.79□□□□□ -1.16
PRKCB-206ENST00000482000 POTECB2RU33 542 aa7.79□□□□□ -1.16
PRKCB-206ENST00000482000 SNRPBP14678 240 aaKnown RBP7.79□□□□□ -1.16
PRKCB-206ENST00000482000 RHOQP17081 205 aa7.79□□□□□ -1.16
PRKCB-206ENST00000482000 SCNN1AP37088 669 aa7.79□□□□□ -1.16
PRKCB-206ENST00000482000 CAPN12Q6ZSI9 719 aa7.79□□□□□ -1.16
PRKCB-206ENST00000482000 DHX29Q7Z478 1369 aaKnown RBP7.79□□□□□ -1.16
PRKCB-206ENST00000482000 CROCC2H7BZ55 1655 aa7.79□□□□□ -1.16
PRKCB-206ENST00000482000 KDM5DQ9BY66 1539 aa7.78□□□□□ -1.16
PRKCB-206ENST00000482000 FAM135AQ9P2D6 1515 aa7.78□□□□□ -1.16
PRKCB-206ENST00000482000 DNMT1P26358 1616 aaKnown RBP7.78□□□□□ -1.16
PRKCB-206ENST00000482000 POLR1AO95602 1720 aaPredicted RBP7.78□□□□□ -1.16
PRKCB-206ENST00000482000 SENP3-EIF4A1A0A087X0R7 540 aa7.78□□□□□ -1.16
PRKCB-206ENST00000482000 PTCD1O75127 700 aaKnown RBP7.78□□□□□ -1.16
PRKCB-206ENST00000482000 PLA2G4AP47712 749 aa7.78□□□□□ -1.16
PRKCB-206ENST00000482000 GGT6Q6P531 493 aa7.78□□□□□ -1.16
PRKCB-206ENST00000482000 TXNDC2Q86VQ3 553 aa7.78□□□□□ -1.16
PRKCB-206ENST00000482000 KCTD17Q8N5Z5 321 aa7.78□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms