RNA–Protein interactions for RNA: ENST00000481875.1

GARNL3-217, Transcript of GTPase activating Rap/RanGAP domain like 3, humanhuman

TSL 4

Gene GARNL3, Length 639 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GARNL3-217ENST00000481875 KIF6Q6ZMV9 814 aa15.2■□□□□ 0.02
GARNL3-217ENST00000481875 TTLL7Q6ZT98 887 aa15.2■□□□□ 0.02
GARNL3-217ENST00000481875 CRAMP1Q96RY5 1269 aa15.2■□□□□ 0.02
GARNL3-217ENST00000481875 ITGBL1O95965 494 aaPredicted RBP15.19■□□□□ 0.02
GARNL3-217ENST00000481875 IARSP41252 1262 aaKnown RBP15.19■□□□□ 0.02
GARNL3-217ENST00000481875 PDIA6Q15084 440 aa15.19■□□□□ 0.02
GARNL3-217ENST00000481875 PARP10Q53GL7 1025 aa15.19■□□□□ 0.02
GARNL3-217ENST00000481875 SLC10A5Q5PT55 438 aa15.19■□□□□ 0.02
GARNL3-217ENST00000481875 COL13A1Q5TAT6 717 aaPredicted RBP15.19■□□□□ 0.02
GARNL3-217ENST00000481875 GPC2Q8N158 579 aa15.19■□□□□ 0.02
GARNL3-217ENST00000481875 ZNF277Q9NRM2 450 aaPredicted RBP15.19■□□□□ 0.02
GARNL3-217ENST00000481875 ABCC12Q96J65 1359 aa15.19■□□□□ 0.02
GARNL3-217ENST00000481875 RNF123Q5XPI4 1314 aa15.18■□□□□ 0.02
GARNL3-217ENST00000481875 UBN2Q6ZU65 1347 aa15.18■□□□□ 0.02
GARNL3-217ENST00000481875 MAPK8IP3Q9UPT6 1336 aa15.18■□□□□ 0.02
GARNL3-217ENST00000481875 POTEIP0CG38 1075 aa15.18■□□□□ 0.02
GARNL3-217ENST00000481875 POTEJP0CG39 1038 aa15.18■□□□□ 0.02
GARNL3-217ENST00000481875 PNMA8AQ86V59 439 aaPredicted RBP15.18■□□□□ 0.02
GARNL3-217ENST00000481875 SYNE4Q8N205 404 aa15.18■□□□□ 0.02
GARNL3-217ENST00000481875 VPS33BQ9H267 617 aa15.18■□□□□ 0.02
GARNL3-217ENST00000481875 RRP7AQ9Y3A4 280 aaKnown RBP15.18■□□□□ 0.02
GARNL3-217ENST00000481875 NTSR2O95665 410 aa15.17■□□□□ 0.02
GARNL3-217ENST00000481875 SUSD4Q5VX71 490 aa15.17■□□□□ 0.02
GARNL3-217ENST00000481875 OLFM4Q6UX06 510 aa15.17■□□□□ 0.02
GARNL3-217ENST00000481875 PPP1R42Q7Z4L9 355 aa15.17■□□□□ 0.02
GARNL3-217ENST00000481875 NUTM1Q86Y26 1132 aa15.17■□□□□ 0.02
GARNL3-217ENST00000481875 THUMPD2Q9BTF0 503 aaKnown RBP15.17■□□□□ 0.02
GARNL3-217ENST00000481875 HACL1Q9UJ83 578 aa15.17■□□□□ 0.02
GARNL3-217ENST00000481875 ZNF541Q9H0D2 1346 aa15.17■□□□□ 0.02
GARNL3-217ENST00000481875 FAM177BA6PVY3 158 aa15.16■□□□□ 0.02
GARNL3-217ENST00000481875 MYL6BP14649 208 aa15.16■□□□□ 0.02
GARNL3-217ENST00000481875 LMOD3Q0VAK6 560 aa15.16■□□□□ 0.02
GARNL3-217ENST00000481875 JDP2Q8WYK2 163 aa15.16■□□□□ 0.02
GARNL3-217ENST00000481875 ANKRD36CQ5JPF3 1778 aa15.16■□□□□ 0.02
GARNL3-217ENST00000481875 CNTNAP1P78357 1384 aa15.15■□□□□ 0.02
GARNL3-217ENST00000481875 EPHX2P34913 555 aa15.15■□□□□ 0.02
GARNL3-217ENST00000481875 TMPOP42166 694 aaKnown RBP15.15■□□□□ 0.02
GARNL3-217ENST00000481875 RIPK4P57078 832 aa15.15■□□□□ 0.02
GARNL3-217ENST00000481875 NGEFQ8N5V2 710 aa15.15■□□□□ 0.02
GARNL3-217ENST00000481875 RPGRQ92834 1020 aaKnown RBP15.15■□□□□ 0.02
GARNL3-217ENST00000481875 RBM17Q96I25 401 aaKnown RBP15.15■□□□□ 0.02
GARNL3-217ENST00000481875 ZBTB3Q9H5J0 574 aa15.15■□□□□ 0.02
GARNL3-217ENST00000481875 PRKRIP1Q9H875 184 aaPredicted RBP15.15■□□□□ 0.02
GARNL3-217ENST00000481875 TSPYL4Q9UJ04 414 aa15.15■□□□□ 0.02
GARNL3-217ENST00000481875 HSPA1AP0DMV8 641 aaKnown RBP15.14■□□□□ 0.01
GARNL3-217ENST00000481875 HSPA1BP0DMV9 641 aaKnown RBP15.14■□□□□ 0.01
GARNL3-217ENST00000481875 NLRP3Q96P20 1036 aa15.14■□□□□ 0.01
GARNL3-217ENST00000481875 COL4A5P29400 1685 aa15.13■□□□□ 0.01
GARNL3-217ENST00000481875 TMEM88BA6NKF7 163 aa15.13■□□□□ 0.01
GARNL3-217ENST00000481875 CHL1O00533 1208 aa15.13■□□□□ 0.01
GARNL3-217ENST00000481875 GPTP24298 496 aa15.13■□□□□ 0.01
GARNL3-217ENST00000481875 LAMB2P55268 1798 aa15.12■□□□□ 0.01
GARNL3-217ENST00000481875 HSP90AB3PQ58FF7 597 aa15.12■□□□□ 0.01
GARNL3-217ENST00000481875 UTP14AQ9BVJ6 771 aaKnown RBP15.12■□□□□ 0.01
GARNL3-217ENST00000481875 RTFDC1Q9BY42 306 aaPredicted RBP15.12■□□□□ 0.01
GARNL3-217ENST00000481875 ATP6V0A2Q9Y487 856 aa15.12■□□□□ 0.01
GARNL3-217ENST00000481875 BBOX1O75936 387 aa15.11■□□□□ 0.01
GARNL3-217ENST00000481875 HOXB7P09629 217 aa15.11■□□□□ 0.01
GARNL3-217ENST00000481875 EIF6P56537 245 aaKnown RBP15.11■□□□□ 0.01
GARNL3-217ENST00000481875 CNTROBQ8N137 903 aa15.11■□□□□ 0.01
GARNL3-217ENST00000481875 DDX21Q9NR30 783 aaKnown RBP eCLIP15.11■□□□□ 0.01
GARNL3-217ENST00000481875 LTBP1Q14766 1721 aa15.11■□□□□ 0.01
GARNL3-217ENST00000481875 MYBBP1AQ9BQG0 1328 aaKnown RBP15.11■□□□□ 0.01
GARNL3-217ENST00000481875 RASSF10A6NK89 507 aa15.1■□□□□ 0.01
GARNL3-217ENST00000481875 PPEF1O14829 653 aaPredicted RBP15.1■□□□□ 0.01
GARNL3-217ENST00000481875 PROSER3Q2NL68 480 aa15.1■□□□□ 0.01
GARNL3-217ENST00000481875 C3orf67Q6ZVT6 689 aa15.1■□□□□ 0.01
GARNL3-217ENST00000481875 TNS4Q8IZW8 715 aa15.1■□□□□ 0.01
GARNL3-217ENST00000481875 TRPM7Q96QT4 1865 aa15.1■□□□□ 0.01
GARNL3-217ENST00000481875 EIF2S2P20042 333 aaKnown RBP15.09■□□□□ 0.01
GARNL3-217ENST00000481875 SCNN1DP51172 638 aa15.09■□□□□ 0.01
GARNL3-217ENST00000481875 TCIRG1Q13488 830 aa15.09■□□□□ 0.01
GARNL3-217ENST00000481875 EAPPQ56P03 285 aaPredicted RBP15.09■□□□□ 0.01
GARNL3-217ENST00000481875 COPS6Q7L5N1 327 aa15.09■□□□□ 0.01
GARNL3-217ENST00000481875 NLRP10Q86W26 655 aa15.09■□□□□ 0.01
GARNL3-217ENST00000481875 SP8Q8IXZ3 490 aa15.09■□□□□ 0.01
GARNL3-217ENST00000481875 LARGE2Q8N3Y3 721 aa15.09■□□□□ 0.01
GARNL3-217ENST00000481875 SUPT20HQ8NEM7 779 aa15.09■□□□□ 0.01
GARNL3-217ENST00000481875 MKRN1Q9UHC7 482 aaKnown RBP15.09■□□□□ 0.01
GARNL3-217ENST00000481875 USP50Q70EL3 339 aaPredicted RBP15.08■□□□□ 0
GARNL3-217ENST00000481875 TMC4Q7Z404 712 aa15.08■□□□□ 0
GARNL3-217ENST00000481875 RUNDC1Q96C34 613 aa15.08■□□□□ 0
GARNL3-217ENST00000481875 TMX4Q9H1E5 349 aaPredicted RBP15.08■□□□□ 0
GARNL3-217ENST00000481875 PRDM10Q9NQV6 1147 aa15.08■□□□□ 0
GARNL3-217ENST00000481875 TRIM35Q9UPQ4 493 aa15.08■□□□□ 0
GARNL3-217ENST00000481875 LMOD1P29536 600 aaPredicted RBP15.07■□□□□ 0
GARNL3-217ENST00000481875 VEGFBP49765 207 aa15.07■□□□□ 0
GARNL3-217ENST00000481875 CLEC11AQ9Y240 323 aa15.07■□□□□ 0
GARNL3-217ENST00000481875 ABCC4O15439 1325 aa15.07■□□□□ 0
GARNL3-217ENST00000481875 LRRC37AA6NMS7 1700 aa15.06■□□□□ 0
GARNL3-217ENST00000481875 TRIM28Q13263 835 aaKnown RBP15.06■□□□□ 0
GARNL3-217ENST00000481875 NIM1KQ8IY84 436 aa15.06■□□□□ 0
GARNL3-217ENST00000481875 XAGE3Q8WTP9 111 aa15.06■□□□□ 0
GARNL3-217ENST00000481875 WBP1LQ9NX94 342 aa15.06■□□□□ 0
GARNL3-217ENST00000481875 PGAP2Q9UHJ9 254 aa15.06■□□□□ 0
GARNL3-217ENST00000481875 ZNRF3Q9ULT6 936 aa15.06■□□□□ 0
GARNL3-217ENST00000481875 SH3TC1Q8TE82 1336 aa15.06■□□□□ 0
GARNL3-217ENST00000481875 CDHR2Q9BYE9 1310 aa15.06■□□□□ 0
GARNL3-217ENST00000481875 ANXA1P04083 346 aa15.05■□□□□ -0
GARNL3-217ENST00000481875 EPS15P42566 896 aa15.05■□□□□ -0
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms