RNA–Protein interactions for RNA: ENST00000481849.5

HLA-B-253, Transcript of major histocompatibility complex, class I, B, humanhuman

Gene HLA-B, Length 753 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-B-253ENST00000481849 PLEKHG2Q9H7P9 1386 aa12.19□□□□□ -0.46
HLA-B-253ENST00000481849 TAF1LQ8IZX4 1826 aa12.19□□□□□ -0.46
HLA-B-253ENST00000481849 RFC4P35249 363 aa12.19□□□□□ -0.46
HLA-B-253ENST00000481849 PROX2Q3B8N5 592 aa12.19□□□□□ -0.46
HLA-B-253ENST00000481849 ARHGEF1Q92888 912 aaKnown RBP12.19□□□□□ -0.46
HLA-B-253ENST00000481849 C6orf132Q5T0Z8 1188 aa12.18□□□□□ -0.46
HLA-B-253ENST00000481849 CFAP44Q96MT7 982 aa12.18□□□□□ -0.46
HLA-B-253ENST00000481849 LGR6Q9HBX8 967 aa12.18□□□□□ -0.46
HLA-B-253ENST00000481849 CNTNAP4Q9C0A0 1308 aa12.17□□□□□ -0.46
HLA-B-253ENST00000481849 RPS6KA4O75676 772 aa12.17□□□□□ -0.46
HLA-B-253ENST00000481849 RC3H1Q5TC82 1133 aaKnown RBP12.17□□□□□ -0.46
HLA-B-253ENST00000481849 NLGN1Q8N2Q7 840 aa12.17□□□□□ -0.46
HLA-B-253ENST00000481849 DDX12PQ92771 950 aa12.17□□□□□ -0.46
HLA-B-253ENST00000481849 A0A0G2JLW4 131 aa12.16□□□□□ -0.46
HLA-B-253ENST00000481849 DIAPH1O60610 1272 aaKnown RBP12.16□□□□□ -0.46
HLA-B-253ENST00000481849 GYS1P13807 737 aa12.16□□□□□ -0.46
HLA-B-253ENST00000481849 CRKLP46109 303 aaKnown RBP12.16□□□□□ -0.46
HLA-B-253ENST00000481849 SLC39A6Q13433 755 aa12.16□□□□□ -0.46
HLA-B-253ENST00000481849 AKAP4Q5JQC9 854 aa12.16□□□□□ -0.46
HLA-B-253ENST00000481849 PAXIP1Q6ZW49 1069 aaPredicted RBP12.16□□□□□ -0.46
HLA-B-253ENST00000481849 RBM46Q8TBY0 533 aaKnown RBP12.16□□□□□ -0.46
HLA-B-253ENST00000481849 RTN4Q9NQC3 1192 aaKnown RBP12.16□□□□□ -0.46
HLA-B-253ENST00000481849 SRP68Q9UHB9 627 aaKnown RBP12.16□□□□□ -0.46
HLA-B-253ENST00000481849 UBR3Q6ZT12 1888 aa12.16□□□□□ -0.46
HLA-B-253ENST00000481849 CCDC85CA6NKD9 419 aa12.15□□□□□ -0.46
HLA-B-253ENST00000481849 PER1O15534 1290 aaPredicted RBP12.15□□□□□ -0.46
HLA-B-253ENST00000481849 MTHFSDQ2M296 383 aaKnown RBP12.15□□□□□ -0.46
HLA-B-253ENST00000481849 DNAJC10Q8IXB1 793 aa12.15□□□□□ -0.46
HLA-B-253ENST00000481849 SLC52A2Q9HAB3 445 aa12.15□□□□□ -0.46
HLA-B-253ENST00000481849 WDR70Q9NW82 654 aa12.15□□□□□ -0.46
HLA-B-253ENST00000481849 PARP3Q9Y6F1 533 aa12.15□□□□□ -0.46
HLA-B-253ENST00000481849 U2SURPO15042 1029 aaKnown RBP12.14□□□□□ -0.47
HLA-B-253ENST00000481849 RNMTO43148 476 aaKnown RBP12.14□□□□□ -0.47
HLA-B-253ENST00000481849 ANKK1Q8NFD2 765 aa12.14□□□□□ -0.47
HLA-B-253ENST00000481849 CCDC87Q9NVE4 849 aa12.14□□□□□ -0.47
HLA-B-253ENST00000481849 KIAA1468Q9P260 1216 aa12.14□□□□□ -0.47
HLA-B-253ENST00000481849 BCS1LQ9Y276 419 aa12.14□□□□□ -0.47
HLA-B-253ENST00000481849 CICQ96RK0 1608 aaPredicted RBP12.14□□□□□ -0.47
HLA-B-253ENST00000481849 PXDNLA1KZ92 1463 aa12.14□□□□□ -0.47
HLA-B-253ENST00000481849 FOXN1O15353 648 aa12.13□□□□□ -0.47
HLA-B-253ENST00000481849 DPEP1P16444 411 aa12.13□□□□□ -0.47
HLA-B-253ENST00000481849 TGFB2P61812 414 aa12.12□□□□□ -0.47
HLA-B-253ENST00000481849 PRPF38BQ5VTL8 546 aaKnown RBP12.12□□□□□ -0.47
HLA-B-253ENST00000481849 INTS5Q6P9B9 1019 aaKnown RBP12.12□□□□□ -0.47
HLA-B-253ENST00000481849 MPNDQ8N594 471 aa12.12□□□□□ -0.47
HLA-B-253ENST00000481849 USP42Q9H9J4 1324 aaKnown RBP12.11□□□□□ -0.47
HLA-B-253ENST00000481849 C10orf71Q711Q0 1435 aa12.11□□□□□ -0.47
HLA-B-253ENST00000481849 DDR1Q08345 913 aa12.11□□□□□ -0.47
HLA-B-253ENST00000481849 FSTL1Q12841 308 aa12.11□□□□□ -0.47
HLA-B-253ENST00000481849 USPL1Q5W0Q7 1092 aa12.11□□□□□ -0.47
HLA-B-253ENST00000481849 ARHGAP27Q6ZUM4 889 aa12.11□□□□□ -0.47
HLA-B-253ENST00000481849 SPDYE16A6NNV3 312 aaPredicted RBP12.1□□□□□ -0.47
HLA-B-253ENST00000481849 ZPR1O75312 459 aa12.1□□□□□ -0.47
HLA-B-253ENST00000481849 FCHSD2O94868 740 aa12.1□□□□□ -0.47
HLA-B-253ENST00000481849 NBR1Q14596 966 aa12.1□□□□□ -0.47
HLA-B-253ENST00000481849 E2F4Q16254 413 aa12.1□□□□□ -0.47
HLA-B-253ENST00000481849 LAPTM4BQ86VI4 370 aa12.1□□□□□ -0.47
HLA-B-253ENST00000481849 CYP19A1P11511 503 aaPredicted RBP12.09□□□□□ -0.47
HLA-B-253ENST00000481849 ZBTB1Q9Y2K1 713 aa12.09□□□□□ -0.47
HLA-B-253ENST00000481849 SOS1Q07889 1333 aaPredicted RBP12.09□□□□□ -0.47
HLA-B-253ENST00000481849 COL5A3P25940 1745 aaPredicted RBP12.08□□□□□ -0.47
HLA-B-253ENST00000481849 ZNF831Q5JPB2 1677 aa12.08□□□□□ -0.48
HLA-B-253ENST00000481849 MAP3K7O43318 606 aa12.08□□□□□ -0.48
HLA-B-253ENST00000481849 CANXP27824 592 aaKnown RBP12.08□□□□□ -0.48
HLA-B-253ENST00000481849 CHRNA5P30532 468 aa12.08□□□□□ -0.48
HLA-B-253ENST00000481849 PDIA6Q15084 440 aa12.08□□□□□ -0.48
HLA-B-253ENST00000481849 TTC5Q8N0Z6 440 aa12.08□□□□□ -0.48
HLA-B-253ENST00000481849 POLRMTO00411 1230 aaKnown RBP12.07□□□□□ -0.48
HLA-B-253ENST00000481849 C4AP0C0L4 1744 aa12.07□□□□□ -0.48
HLA-B-253ENST00000481849 KCNA3P22001 575 aa12.07□□□□□ -0.48
HLA-B-253ENST00000481849 TJP1Q07157 1748 aa12.07□□□□□ -0.48
HLA-B-253ENST00000481849 TEFQ10587 303 aa12.07□□□□□ -0.48
HLA-B-253ENST00000481849 ZFRQ96KR1 1074 aaKnown RBP12.07□□□□□ -0.48
HLA-B-253ENST00000481849 COL3A1P02461 1466 aaPredicted RBP12.07□□□□□ -0.48
HLA-B-253ENST00000481849 MRC1P22897 1456 aa12.07□□□□□ -0.48
HLA-B-253ENST00000481849 KCPQ6ZWJ8 1503 aa12.06□□□□□ -0.48
HLA-B-253ENST00000481849 COL15A1P39059 1388 aa12.06□□□□□ -0.48
HLA-B-253ENST00000481849 NPC1L1Q9UHC9 1359 aa12.06□□□□□ -0.48
HLA-B-253ENST00000481849 GNAT3A8MTJ3 354 aa12.06□□□□□ -0.48
HLA-B-253ENST00000481849 TRIM6-TRIM34B2RNG4 842 aa12.06□□□□□ -0.48
HLA-B-253ENST00000481849 TM4SF1P30408 202 aa12.06□□□□□ -0.48
HLA-B-253ENST00000481849 DALRD3Q5D0E6 543 aaKnown RBP12.06□□□□□ -0.48
HLA-B-253ENST00000481849 BICDL1Q6ZP65 573 aa12.06□□□□□ -0.48
HLA-B-253ENST00000481849 IL17REQ8NFR9 667 aa12.06□□□□□ -0.48
HLA-B-253ENST00000481849 GAS2L2Q8NHY3 880 aa12.06□□□□□ -0.48
HLA-B-253ENST00000481849 NMRK2Q9NPI5 230 aa12.06□□□□□ -0.48
HLA-B-253ENST00000481849 PIM2Q9P1W9 311 aa12.06□□□□□ -0.48
HLA-B-253ENST00000481849 SEPT9Q9UHD8 586 aaPredicted RBP12.06□□□□□ -0.48
HLA-B-253ENST00000481849 ZNF330Q9Y3S2 320 aaPredicted RBP12.06□□□□□ -0.48
HLA-B-253ENST00000481849 PRKAR2BP31323 418 aa12.05□□□□□ -0.48
HLA-B-253ENST00000481849 BCAMP50895 628 aa12.05□□□□□ -0.48
HLA-B-253ENST00000481849 NFIXQ14938 502 aa12.05□□□□□ -0.48
HLA-B-253ENST00000481849 ZNF496Q96IT1 587 aaPredicted RBP12.05□□□□□ -0.48
HLA-B-253ENST00000481849 PHACTR3Q96KR7 559 aa12.05□□□□□ -0.48
HLA-B-253ENST00000481849 CFAP53Q96M91 514 aa12.05□□□□□ -0.48
HLA-B-253ENST00000481849 NARFQ9UHQ1 456 aa12.05□□□□□ -0.48
HLA-B-253ENST00000481849 CACNA1AO00555 2505 aa12.05□□□□□ -0.48
HLA-B-253ENST00000481849 STARD3NLO95772 234 aa12.04□□□□□ -0.48
HLA-B-253ENST00000481849 CTCFP49711 727 aaPredicted RBP12.04□□□□□ -0.48
HLA-B-253ENST00000481849 C9orf131Q5VYM1 1079 aa12.04□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 13.3 ms