RNA–Protein interactions for RNA: ENST00000481641.1

CLK1-211, Transcript of CDC like kinase 1, humanhuman

TSL 4

Gene CLK1, Length 690 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK1-211ENST00000481641 IBTKQ9P2D0 1353 aaPredicted RBP24.25■■□□□ 1.47
CLK1-211ENST00000481641 RPGRQ92834 1020 aaKnown RBP24.24■■□□□ 1.47
CLK1-211ENST00000481641 PPP1R42Q7Z4L9 355 aa24.23■■□□□ 1.47
CLK1-211ENST00000481641 RTKN2Q8IZC4 609 aa24.23■■□□□ 1.47
CLK1-211ENST00000481641 APAF1O14727 1248 aa24.22■■□□□ 1.47
CLK1-211ENST00000481641 PARP10Q53GL7 1025 aa24.22■■□□□ 1.47
CLK1-211ENST00000481641 SYNE4Q8N205 404 aa24.22■■□□□ 1.47
CLK1-211ENST00000481641 DDX21Q9NR30 783 aaKnown RBP eCLIP24.22■■□□□ 1.47
CLK1-211ENST00000481641 CHPF2Q9P2E5 772 aa24.22■■□□□ 1.47
CLK1-211ENST00000481641 RIC1Q4ADV7 1423 aa24.21■■□□□ 1.47
CLK1-211ENST00000481641 TCERG1O14776 1098 aaKnown RBP24.21■■□□□ 1.47
CLK1-211ENST00000481641 HOXA10P31260 410 aaPredicted RBP24.21■■□□□ 1.47
CLK1-211ENST00000481641 ZNF428Q96B54 188 aa24.21■■□□□ 1.47
CLK1-211ENST00000481641 UTP14AQ9BVJ6 771 aaKnown RBP24.21■■□□□ 1.47
CLK1-211ENST00000481641 HDGFL1Q5TGJ6 251 aa24.2■■□□□ 1.46
CLK1-211ENST00000481641 CFAP44Q96MT7 982 aa24.2■■□□□ 1.46
CLK1-211ENST00000481641 SNED1Q8TER0 1413 aa24.19■■□□□ 1.46
CLK1-211ENST00000481641 ZNF541Q9H0D2 1346 aa24.19■■□□□ 1.46
CLK1-211ENST00000481641 IARSP41252 1262 aaKnown RBP24.19■■□□□ 1.46
CLK1-211ENST00000481641 RBM17Q96I25 401 aaKnown RBP24.19■■□□□ 1.46
CLK1-211ENST00000481641 MBIPQ9NS73 344 aa24.19■■□□□ 1.46
CLK1-211ENST00000481641 POTEIP0CG38 1075 aa24.18■■□□□ 1.46
CLK1-211ENST00000481641 POTEJP0CG39 1038 aa24.18■■□□□ 1.46
CLK1-211ENST00000481641 CCDC184Q52MB2 194 aa24.18■■□□□ 1.46
CLK1-211ENST00000481641 NLRP10Q86W26 655 aa24.18■■□□□ 1.46
CLK1-211ENST00000481641 ANKRD36CQ5JPF3 1778 aa24.18■■□□□ 1.46
CLK1-211ENST00000481641 TCIRG1Q13488 830 aa24.17■■□□□ 1.46
CLK1-211ENST00000481641 SLC10A5Q5PT55 438 aa24.17■■□□□ 1.46
CLK1-211ENST00000481641 DUSP27Q5VZP5 1158 aa24.17■■□□□ 1.46
CLK1-211ENST00000481641 NLRP3Q96P20 1036 aa24.17■■□□□ 1.46
CLK1-211ENST00000481641 CRAMP1Q96RY5 1269 aa24.17■■□□□ 1.46
CLK1-211ENST00000481641 PPEF1O14829 653 aaPredicted RBP24.16■■□□□ 1.46
CLK1-211ENST00000481641 ZNF853P0CG23 659 aa24.16■■□□□ 1.46
CLK1-211ENST00000481641 HCLS1P14317 486 aaPredicted RBP24.16■■□□□ 1.46
CLK1-211ENST00000481641 HSP90AB3PQ58FF7 597 aa24.16■■□□□ 1.46
CLK1-211ENST00000481641 PSMD1Q99460 953 aa24.15■■□□□ 1.46
CLK1-211ENST00000481641 HOXB7P09629 217 aa24.14■■□□□ 1.45
CLK1-211ENST00000481641 KLRG1Q96E93 195 aa24.14■■□□□ 1.45
CLK1-211ENST00000481641 TRMT112Q9UI30 125 aaKnown RBP24.14■■□□□ 1.45
CLK1-211ENST00000481641 ELL2O00472 640 aaPredicted RBP24.13■■□□□ 1.45
CLK1-211ENST00000481641 CC2D2BQ6DHV5 1058 aa24.13■■□□□ 1.45
CLK1-211ENST00000481641 L3MBTL3Q96JM7 780 aaPredicted RBP24.13■■□□□ 1.45
CLK1-211ENST00000481641 DBF4Q9UBU7 674 aaPredicted RBP24.13■■□□□ 1.45
CLK1-211ENST00000481641 COL4A5P29400 1685 aa24.13■■□□□ 1.45
CLK1-211ENST00000481641 LAMB2P55268 1798 aa24.13■■□□□ 1.45
CLK1-211ENST00000481641 ABCC4O15439 1325 aa24.12■■□□□ 1.45
CLK1-211ENST00000481641 FZD9O00144 591 aa24.12■■□□□ 1.45
CLK1-211ENST00000481641 ANKRD13DQ6ZTN6 518 aa24.12■■□□□ 1.45
CLK1-211ENST00000481641 PLBD2Q8NHP8 589 aa24.12■■□□□ 1.45
CLK1-211ENST00000481641 IFT57Q9NWB7 429 aa24.12■■□□□ 1.45
CLK1-211ENST00000481641 CHADLQ6NUI6 762 aa24.11■■□□□ 1.45
CLK1-211ENST00000481641 TAF1DQ9H5J8 278 aaPredicted RBP24.11■■□□□ 1.45
CLK1-211ENST00000481641 IQCA1LA6NCM1 817 aa24.1■■□□□ 1.45
CLK1-211ENST00000481641 ATP5J2-PTCD1G3V325 749 aa24.1■■□□□ 1.45
CLK1-211ENST00000481641 GNAI1P63096 354 aa24.1■■□□□ 1.45
CLK1-211ENST00000481641 JDP2Q8WYK2 163 aa24.1■■□□□ 1.45
CLK1-211ENST00000481641 SCN4AP35499 1836 aa24.1■■□□□ 1.45
CLK1-211ENST00000481641 RNF123Q5XPI4 1314 aa24.1■■□□□ 1.45
CLK1-211ENST00000481641 SH3TC1Q8TE82 1336 aa24.1■■□□□ 1.45
CLK1-211ENST00000481641 HYPKQ9NX55 129 aa24.09■■□□□ 1.45
CLK1-211ENST00000481641 LARGE2Q8N3Y3 721 aa24.08■■□□□ 1.45
CLK1-211ENST00000481641 C8orf58Q8NAV2 365 aa24.08■■□□□ 1.45
CLK1-211ENST00000481641 ISCA1Q9BUE6 129 aa24.08■■□□□ 1.45
CLK1-211ENST00000481641 ATP6V0A2Q9Y487 856 aa24.08■■□□□ 1.45
CLK1-211ENST00000481641 TAF1P21675 1872 aa24.08■■□□□ 1.45
CLK1-211ENST00000481641 EAPPQ56P03 285 aaPredicted RBP24.07■■□□□ 1.44
CLK1-211ENST00000481641 FAM89AQ96GI7 184 aa24.07■■□□□ 1.44
CLK1-211ENST00000481641 PHAXQ9H814 394 aaKnown RBP24.07■■□□□ 1.44
CLK1-211ENST00000481641 HACL1Q9UJ83 578 aa24.07■■□□□ 1.44
CLK1-211ENST00000481641 GJA3Q9Y6H8 435 aa24.07■■□□□ 1.44
CLK1-211ENST00000481641 CALD1Q05682 793 aaKnown RBP24.06■■□□□ 1.44
CLK1-211ENST00000481641 GRIPAP1Q4V328 841 aa24.06■■□□□ 1.44
CLK1-211ENST00000481641 RTL5Q5HYW3 569 aaPredicted RBP24.06■■□□□ 1.44
CLK1-211ENST00000481641 EPHX2P34913 555 aa24.05■■□□□ 1.44
CLK1-211ENST00000481641 EIF6P56537 245 aaKnown RBP24.05■■□□□ 1.44
CLK1-211ENST00000481641 AOC3Q16853 763 aa24.05■■□□□ 1.44
CLK1-211ENST00000481641 DDX46Q7L014 1031 aaKnown RBP24.05■■□□□ 1.44
CLK1-211ENST00000481641 LDHDQ86WU2 507 aa24.05■■□□□ 1.44
CLK1-211ENST00000481641 GPC2Q8N158 579 aa24.05■■□□□ 1.44
CLK1-211ENST00000481641 JMYQ8N9B5 988 aa24.05■■□□□ 1.44
CLK1-211ENST00000481641 PPIP5K2O43314 1243 aa24.04■■□□□ 1.44
CLK1-211ENST00000481641 BBOX1O75936 387 aa24.04■■□□□ 1.44
CLK1-211ENST00000481641 ZEB1P37275 1124 aaPredicted RBP24.04■■□□□ 1.44
CLK1-211ENST00000481641 TMX4Q9H1E5 349 aaPredicted RBP24.04■■□□□ 1.44
CLK1-211ENST00000481641 DDX60Q8IY21 1712 aaKnown RBP24.04■■□□□ 1.44
CLK1-211ENST00000481641 GRAPQ13588 217 aa24.03■■□□□ 1.44
CLK1-211ENST00000481641 RIC3Q7Z5B4 369 aa24.03■■□□□ 1.44
CLK1-211ENST00000481641 SP8Q8IXZ3 490 aa24.03■■□□□ 1.44
CLK1-211ENST00000481641 TSPYL6Q8N831 410 aa24.03■■□□□ 1.44
CLK1-211ENST00000481641 GRAPLQ8TC17 118 aaPredicted RBP24.03■■□□□ 1.44
CLK1-211ENST00000481641 CLEC11AQ9Y240 323 aa24.03■■□□□ 1.44
CLK1-211ENST00000481641 NIM1KQ8IY84 436 aa24.02■■□□□ 1.44
CLK1-211ENST00000481641 TSR2Q969E8 191 aaKnown RBP24.02■■□□□ 1.44
CLK1-211ENST00000481641 GOLGA2Q08379 1002 aa24.01■■□□□ 1.43
CLK1-211ENST00000481641 DPP8Q6V1X1 898 aaPredicted RBP24.01■■□□□ 1.43
CLK1-211ENST00000481641 MPNDQ8N594 471 aa24.01■■□□□ 1.43
CLK1-211ENST00000481641 PCNTO95613 3336 aa24■■□□□ 1.43
CLK1-211ENST00000481641 MYD88Q99836 296 aa24■■□□□ 1.43
CLK1-211ENST00000481641 RTFDC1Q9BY42 306 aaPredicted RBP24■■□□□ 1.43
CLK1-211ENST00000481641 LTBP1Q14766 1721 aa24■■□□□ 1.43
Retrieved 100 of 20,778 RNA–protein pairs in 35.8 ms