RNA–Protein interactions for RNA: ENST00000481260.1

RAPGEF1-207, Transcript of Rap guanine nucleotide exchange factor 1, humanhuman

TSL 5

Gene RAPGEF1, Length 1,034 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAPGEF1-207ENST00000481260 TWISTNBQ3B726 338 aaPredicted RBP14.75□□□□□ -0.05
RAPGEF1-207ENST00000481260 RTL5Q5HYW3 569 aaPredicted RBP14.75□□□□□ -0.05
RAPGEF1-207ENST00000481260 WDR63Q8IWG1 891 aa14.75□□□□□ -0.05
RAPGEF1-207ENST00000481260 MIER1Q8N108 512 aa14.75□□□□□ -0.05
RAPGEF1-207ENST00000481260 ISCA1Q9BUE6 129 aa14.75□□□□□ -0.05
RAPGEF1-207ENST00000481260 UTP14AQ9BVJ6 771 aaKnown RBP14.75□□□□□ -0.05
RAPGEF1-207ENST00000481260 HYPKQ9NX55 129 aa14.75□□□□□ -0.05
RAPGEF1-207ENST00000481260 RNF181Q9P0P0 153 aa14.75□□□□□ -0.05
RAPGEF1-207ENST00000481260 COL4A1P02462 1669 aa14.74□□□□□ -0.05
RAPGEF1-207ENST00000481260 IBTKQ9P2D0 1353 aaPredicted RBP14.74□□□□□ -0.05
RAPGEF1-207ENST00000481260 NPR1P16066 1061 aa14.74□□□□□ -0.05
RAPGEF1-207ENST00000481260 CRY2Q49AN0 593 aa14.74□□□□□ -0.05
RAPGEF1-207ENST00000481260 NCBP3Q53F19 620 aaKnown RBP14.74□□□□□ -0.05
RAPGEF1-207ENST00000481260 NYXQ9GZU5 481 aa14.74□□□□□ -0.05
RAPGEF1-207ENST00000481260 ANKRD36CQ5JPF3 1778 aa14.74□□□□□ -0.05
RAPGEF1-207ENST00000481260 VAMP4O75379 141 aa14.73□□□□□ -0.05
RAPGEF1-207ENST00000481260 PARP10Q53GL7 1025 aa14.73□□□□□ -0.05
RAPGEF1-207ENST00000481260 CNKSR1Q969H4 720 aa14.73□□□□□ -0.05
RAPGEF1-207ENST00000481260 ARFGEF2Q9Y6D5 1785 aa14.73□□□□□ -0.05
RAPGEF1-207ENST00000481260 CCDC30Q5VVM6 783 aa14.72□□□□□ -0.05
RAPGEF1-207ENST00000481260 PPP1R42Q7Z4L9 355 aa14.72□□□□□ -0.05
RAPGEF1-207ENST00000481260 FAM89AQ96GI7 184 aa14.72□□□□□ -0.05
RAPGEF1-207ENST00000481260 CDCA7LQ96GN5 454 aa14.72□□□□□ -0.05
RAPGEF1-207ENST00000481260 MYD88Q99836 296 aa14.72□□□□□ -0.05
RAPGEF1-207ENST00000481260 TRMT112Q9UI30 125 aaKnown RBP14.72□□□□□ -0.05
RAPGEF1-207ENST00000481260 SBF1O95248 1867 aa14.72□□□□□ -0.05
RAPGEF1-207ENST00000481260 SLC10A5Q5PT55 438 aa14.71□□□□□ -0.05
RAPGEF1-207ENST00000481260 RIC3Q7Z5B4 369 aa14.71□□□□□ -0.05
RAPGEF1-207ENST00000481260 NMRK2Q9NPI5 230 aa14.71□□□□□ -0.05
RAPGEF1-207ENST00000481260 PDZRN3Q9UPQ7 1066 aa14.71□□□□□ -0.05
RAPGEF1-207ENST00000481260 SNED1Q8TER0 1413 aa14.71□□□□□ -0.05
RAPGEF1-207ENST00000481260 CEP350Q5VT06 3117 aa14.7□□□□□ -0.06
RAPGEF1-207ENST00000481260 RIC1Q4ADV7 1423 aa14.7□□□□□ -0.06
RAPGEF1-207ENST00000481260 CCER2I3L3R5 266 aa14.7□□□□□ -0.06
RAPGEF1-207ENST00000481260 SLC4A2P04920 1241 aa14.7□□□□□ -0.06
RAPGEF1-207ENST00000481260 GOLGA2Q08379 1002 aa14.7□□□□□ -0.06
RAPGEF1-207ENST00000481260 HSP90AB3PQ58FF7 597 aa14.7□□□□□ -0.06
RAPGEF1-207ENST00000481260 DIEXFQ68CQ4 756 aaKnown RBP14.7□□□□□ -0.06
RAPGEF1-207ENST00000481260 MAP3K2Q9Y2U5 619 aa14.7□□□□□ -0.06
RAPGEF1-207ENST00000481260 PI4KAP2A4QPH2 592 aa14.69□□□□□ -0.06
RAPGEF1-207ENST00000481260 IGKV5-2P06315 115 aa14.69□□□□□ -0.06
RAPGEF1-207ENST00000481260 HOXA10P31260 410 aaPredicted RBP14.69□□□□□ -0.06
RAPGEF1-207ENST00000481260 C1QTNF8P60827 252 aa14.69□□□□□ -0.06
RAPGEF1-207ENST00000481260 PI4KAP1Q8N8J0 262 aa14.69□□□□□ -0.06
RAPGEF1-207ENST00000481260 RPGRQ92834 1020 aaKnown RBP14.69□□□□□ -0.06
RAPGEF1-207ENST00000481260 GPBP1L1Q9HC44 474 aaPredicted RBP14.69□□□□□ -0.06
RAPGEF1-207ENST00000481260 LAMB2P55268 1798 aa14.69□□□□□ -0.06
RAPGEF1-207ENST00000481260 FER1L6Q2WGJ9 1857 aa14.69□□□□□ -0.06
RAPGEF1-207ENST00000481260 ABCC4O15439 1325 aa14.68□□□□□ -0.06
RAPGEF1-207ENST00000481260 SH3TC1Q8TE82 1336 aa14.68□□□□□ -0.06
RAPGEF1-207ENST00000481260 KIF3CO14782 793 aa14.68□□□□□ -0.06
RAPGEF1-207ENST00000481260 LMNB1P20700 586 aa14.68□□□□□ -0.06
RAPGEF1-207ENST00000481260 METTL22Q9BUU2 404 aaPredicted RBP14.68□□□□□ -0.06
RAPGEF1-207ENST00000481260 ZNF277Q9NRM2 450 aaPredicted RBP14.68□□□□□ -0.06
RAPGEF1-207ENST00000481260 DDX60Q8IY21 1712 aaKnown RBP14.68□□□□□ -0.06
RAPGEF1-207ENST00000481260 COL4A5P29400 1685 aa14.68□□□□□ -0.06
RAPGEF1-207ENST00000481260 TAF1P21675 1872 aa14.67□□□□□ -0.06
RAPGEF1-207ENST00000481260 CWF19L2Q2TBE0 894 aaKnown RBP14.67□□□□□ -0.06
RAPGEF1-207ENST00000481260 NLRP3Q96P20 1036 aa14.67□□□□□ -0.06
RAPGEF1-207ENST00000481260 TAOK3Q9H2K8 898 aa14.67□□□□□ -0.06
RAPGEF1-207ENST00000481260 F6X3S4 739 aa14.66□□□□□ -0.06
RAPGEF1-207ENST00000481260 IRS4O14654 1257 aaPredicted RBP14.66□□□□□ -0.06
RAPGEF1-207ENST00000481260 PPEF1O14829 653 aaPredicted RBP14.66□□□□□ -0.06
RAPGEF1-207ENST00000481260 FLIIQ13045 1269 aa14.66□□□□□ -0.06
RAPGEF1-207ENST00000481260 TRIM28Q13263 835 aaKnown RBP14.66□□□□□ -0.06
RAPGEF1-207ENST00000481260 CCDC93Q567U6 631 aa14.66□□□□□ -0.06
RAPGEF1-207ENST00000481260 KSR2Q6VAB6 950 aa14.66□□□□□ -0.06
RAPGEF1-207ENST00000481260 RBM17Q96I25 401 aaKnown RBP14.66□□□□□ -0.06
RAPGEF1-207ENST00000481260 CRAMP1Q96RY5 1269 aa14.66□□□□□ -0.06
RAPGEF1-207ENST00000481260 STK31Q9BXU1 1019 aa14.66□□□□□ -0.06
RAPGEF1-207ENST00000481260 CCDC88AQ3V6T2 1871 aa14.65□□□□□ -0.06
RAPGEF1-207ENST00000481260 CCDC85AQ96PX6 553 aaPredicted RBP14.65□□□□□ -0.06
RAPGEF1-207ENST00000481260 MYH16Q9H6N6 1097 aa14.65□□□□□ -0.06
RAPGEF1-207ENST00000481260 TIAM2Q8IVF5 1701 aa14.65□□□□□ -0.06
RAPGEF1-207ENST00000481260 LTBP3Q9NS15 1303 aa14.65□□□□□ -0.06
RAPGEF1-207ENST00000481260 ALDH1B1P30837 517 aa14.64□□□□□ -0.07
RAPGEF1-207ENST00000481260 FKBP4Q02790 459 aaKnown RBP eCLIP14.64□□□□□ -0.07
RAPGEF1-207ENST00000481260 SLFN5Q08AF3 891 aa14.64□□□□□ -0.07
RAPGEF1-207ENST00000481260 CELF1Q92879 486 aaKnown RBP14.64□□□□□ -0.07
RAPGEF1-207ENST00000481260 RRAGCQ9HB90 399 aa14.64□□□□□ -0.07
RAPGEF1-207ENST00000481260 SEC31BQ9NQW1 1179 aa14.64□□□□□ -0.07
RAPGEF1-207ENST00000481260 CWC25Q9NXE8 425 aaPredicted RBP14.64□□□□□ -0.07
RAPGEF1-207ENST00000481260 NEURL1BA8MQ27 555 aa14.63□□□□□ -0.07
RAPGEF1-207ENST00000481260 POTECB2RU33 542 aa14.63□□□□□ -0.07
RAPGEF1-207ENST00000481260 FKBP5Q13451 457 aaPredicted RBP14.63□□□□□ -0.07
RAPGEF1-207ENST00000481260 ZBTB38Q8NAP3 1195 aaPredicted RBP14.63□□□□□ -0.07
RAPGEF1-207ENST00000481260 RNF123Q5XPI4 1314 aa14.63□□□□□ -0.07
RAPGEF1-207ENST00000481260 ZNF541Q9H0D2 1346 aa14.63□□□□□ -0.07
RAPGEF1-207ENST00000481260 DDX58O95786 925 aaKnown RBP14.62□□□□□ -0.07
RAPGEF1-207ENST00000481260 CCDC191Q8NCU4 936 aa14.62□□□□□ -0.07
RAPGEF1-207ENST00000481260 DDNO94850 711 aaPredicted RBP14.61□□□□□ -0.07
RAPGEF1-207ENST00000481260 PCCAP05165 728 aaPredicted RBP14.61□□□□□ -0.07
RAPGEF1-207ENST00000481260 GRAPQ13588 217 aa14.61□□□□□ -0.07
RAPGEF1-207ENST00000481260 SF3B3Q15393 1217 aaKnown RBP14.61□□□□□ -0.07
RAPGEF1-207ENST00000481260 SOGA3Q5TF21 947 aa14.61□□□□□ -0.07
RAPGEF1-207ENST00000481260 TRMT2AQ8IZ69 625 aaKnown RBP14.61□□□□□ -0.07
RAPGEF1-207ENST00000481260 GRAPLQ8TC17 118 aaPredicted RBP14.61□□□□□ -0.07
RAPGEF1-207ENST00000481260 BCL2L13Q9BXK5 485 aa14.61□□□□□ -0.07
RAPGEF1-207ENST00000481260 ATP6V0A2Q9Y487 856 aa14.61□□□□□ -0.07
RAPGEF1-207ENST00000481260 GLTPD2A6NH11 291 aa14.6□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 50.1 ms