RNA–Protein interactions for RNA: ENST00000481242.5

GARNL3-216, Transcript of GTPase activating Rap/RanGAP domain like 3, humanhuman

TSL 2

Gene GARNL3, Length 4,816 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GARNL3-216ENST00000481242 NIP7Q9Y221 180 aaKnown RBP eCLIP11□□□□□ -0.65
GARNL3-216ENST00000481242 MAP3K11Q16584 847 aa10.99□□□□□ -0.65
GARNL3-216ENST00000481242 STXBP4Q6ZWJ1 553 aa10.99□□□□□ -0.65
GARNL3-216ENST00000481242 KAT14Q9H8E8 782 aa10.99□□□□□ -0.65
GARNL3-216ENST00000481242 RBM27Q9P2N5 1060 aaKnown RBP10.99□□□□□ -0.65
GARNL3-216ENST00000481242 BMP15O95972 392 aa10.99□□□□□ -0.65
GARNL3-216ENST00000481242 HOXB7P09629 217 aa10.99□□□□□ -0.65
GARNL3-216ENST00000481242 HDAC1Q13547 482 aaPredicted RBP10.99□□□□□ -0.65
GARNL3-216ENST00000481242 PDCL2Q8N4E4 241 aa10.99□□□□□ -0.65
GARNL3-216ENST00000481242 ZNF397Q8NF99 534 aaPredicted RBP10.99□□□□□ -0.65
GARNL3-216ENST00000481242 MAP3K5Q99683 1374 aa10.99□□□□□ -0.65
GARNL3-216ENST00000481242 B4DLN1 442 aa10.99□□□□□ -0.65
GARNL3-216ENST00000481242 SMARCA5O60264 1052 aaPredicted RBP10.99□□□□□ -0.65
GARNL3-216ENST00000481242 IARSP41252 1262 aaKnown RBP10.99□□□□□ -0.65
GARNL3-216ENST00000481242 MRPL12P52815 198 aaKnown RBP10.99□□□□□ -0.65
GARNL3-216ENST00000481242 NLRP5P59047 1200 aa10.99□□□□□ -0.65
GARNL3-216ENST00000481242 AMPD3Q01432 767 aa10.99□□□□□ -0.65
GARNL3-216ENST00000481242 SIRT1Q96EB6 747 aa10.99□□□□□ -0.65
GARNL3-216ENST00000481242 DDX11Q96FC9 970 aa10.99□□□□□ -0.65
GARNL3-216ENST00000481242 ZC3H12CQ9C0D7 883 aaKnown RBP10.99□□□□□ -0.65
GARNL3-216ENST00000481242 CHPF2Q9P2E5 772 aa10.99□□□□□ -0.65
GARNL3-216ENST00000481242 PARP3Q9Y6F1 533 aa10.99□□□□□ -0.65
GARNL3-216ENST00000481242 NCKAP5LQ9HCH0 1330 aa10.99□□□□□ -0.65
GARNL3-216ENST00000481242 NBPF7P0C2Y1 421 aaPredicted RBP10.98□□□□□ -0.65
GARNL3-216ENST00000481242 MATR3P43243 847 aaKnown RBP eCLIP10.98□□□□□ -0.65
GARNL3-216ENST00000481242 IQCEQ6IPM2 695 aa10.98□□□□□ -0.65
GARNL3-216ENST00000481242 DZIP3Q86Y13 1208 aaKnown RBP10.98□□□□□ -0.65
GARNL3-216ENST00000481242 HSPA2P54652 639 aa10.98□□□□□ -0.65
GARNL3-216ENST00000481242 GRPEL1Q9HAV7 217 aa10.98□□□□□ -0.65
GARNL3-216ENST00000481242 TCP11L1Q9NUJ3 509 aa10.98□□□□□ -0.65
GARNL3-216ENST00000481242 FAM83GA6ND36 823 aa10.98□□□□□ -0.65
GARNL3-216ENST00000481242 NF2P35240 595 aa10.98□□□□□ -0.65
GARNL3-216ENST00000481242 PARP10Q53GL7 1025 aa10.98□□□□□ -0.65
GARNL3-216ENST00000481242 CCDC83Q8IWF9 413 aa10.98□□□□□ -0.65
GARNL3-216ENST00000481242 ESPNB1AK53 854 aa10.98□□□□□ -0.65
GARNL3-216ENST00000481242 GNAT2P19087 354 aa10.98□□□□□ -0.65
GARNL3-216ENST00000481242 EIF5P55010 431 aaKnown RBP10.98□□□□□ -0.65
GARNL3-216ENST00000481242 TMEM67Q5HYA8 995 aa10.98□□□□□ -0.65
GARNL3-216ENST00000481242 ANO10Q9NW15 660 aa10.98□□□□□ -0.65
GARNL3-216ENST00000481242 PARD3Q8TEW0 1356 aa10.97□□□□□ -0.65
GARNL3-216ENST00000481242 CFAP43Q8NDM7 1665 aa10.97□□□□□ -0.65
GARNL3-216ENST00000481242 MCM5P33992 734 aa10.97□□□□□ -0.65
GARNL3-216ENST00000481242 IRX3P78415 501 aaPredicted RBP10.97□□□□□ -0.65
GARNL3-216ENST00000481242 WDR78Q5VTH9 848 aa10.97□□□□□ -0.65
GARNL3-216ENST00000481242 VPS36Q86VN1 386 aa10.97□□□□□ -0.65
GARNL3-216ENST00000481242 ESR2Q92731 530 aa10.97□□□□□ -0.65
GARNL3-216ENST00000481242 SCLT1Q96NL6 688 aa10.97□□□□□ -0.65
GARNL3-216ENST00000481242 CETN1Q12798 172 aa10.97□□□□□ -0.65
GARNL3-216ENST00000481242 C20orf194Q5TEA3 1177 aa10.97□□□□□ -0.65
GARNL3-216ENST00000481242 SMAP1Q8IYB5 467 aaPredicted RBP10.97□□□□□ -0.65
GARNL3-216ENST00000481242 JDP2Q8WYK2 163 aa10.97□□□□□ -0.65
GARNL3-216ENST00000481242 TFCP2L1Q9NZI6 479 aa10.97□□□□□ -0.65
GARNL3-216ENST00000481242 AXDND1Q5T1B0 1012 aaPredicted RBP10.97□□□□□ -0.65
GARNL3-216ENST00000481242 ANKRD44Q8N8A2 993 aa10.97□□□□□ -0.65
GARNL3-216ENST00000481242 PIK3C2GO75747 1445 aa10.97□□□□□ -0.65
GARNL3-216ENST00000481242 ATP8B2P98198 1209 aa10.97□□□□□ -0.65
GARNL3-216ENST00000481242 FKBP15Q5T1M5 1219 aa10.97□□□□□ -0.65
GARNL3-216ENST00000481242 LMBR1LQ6UX01 489 aa10.97□□□□□ -0.65
GARNL3-216ENST00000481242 NPC1L1Q9UHC9 1359 aa10.97□□□□□ -0.65
GARNL3-216ENST00000481242 CLCN1P35523 988 aa10.96□□□□□ -0.65
GARNL3-216ENST00000481242 CCDC181Q5TID7 509 aa10.96□□□□□ -0.65
GARNL3-216ENST00000481242 KANK3Q6NY19 840 aa10.96□□□□□ -0.65
GARNL3-216ENST00000481242 NEK1Q96PY6 1258 aa10.96□□□□□ -0.65
GARNL3-216ENST00000481242 ZNF219Q9P2Y4 722 aaPredicted RBP10.96□□□□□ -0.65
GARNL3-216ENST00000481242 HOXC9P31274 260 aa10.96□□□□□ -0.65
GARNL3-216ENST00000481242 CCDC148Q8NFR7 591 aa10.96□□□□□ -0.65
GARNL3-216ENST00000481242 PIBF1Q8WXW3 757 aa10.96□□□□□ -0.65
GARNL3-216ENST00000481242 CALML4Q96GE6 196 aa10.96□□□□□ -0.65
GARNL3-216ENST00000481242 EDC4Q6P2E9 1401 aaKnown RBP10.96□□□□□ -0.66
GARNL3-216ENST00000481242 ACSBG1Q96GR2 724 aa10.96□□□□□ -0.66
GARNL3-216ENST00000481242 GTPBP4Q9BZE4 634 aaKnown RBP10.96□□□□□ -0.66
GARNL3-216ENST00000481242 DDX21Q9NR30 783 aaKnown RBP eCLIP10.96□□□□□ -0.66
GARNL3-216ENST00000481242 MTHFSDQ2M296 383 aaKnown RBP10.96□□□□□ -0.66
GARNL3-216ENST00000481242 NAA16Q6N069 864 aaPredicted RBP10.96□□□□□ -0.66
GARNL3-216ENST00000481242 USP16Q9Y5T5 823 aa10.96□□□□□ -0.66
GARNL3-216ENST00000481242 ATP7AQ04656 1500 aa10.95□□□□□ -0.66
GARNL3-216ENST00000481242 CAVIN2O95810 425 aa10.95□□□□□ -0.66
GARNL3-216ENST00000481242 BRD2P25440 801 aaKnown RBP10.95□□□□□ -0.66
GARNL3-216ENST00000481242 PAXIP1Q6ZW49 1069 aaPredicted RBP10.95□□□□□ -0.66
GARNL3-216ENST00000481242 NFATC2IPQ8NCF5 419 aa10.95□□□□□ -0.66
GARNL3-216ENST00000481242 CCDC150Q8NCX0 1101 aa10.95□□□□□ -0.66
GARNL3-216ENST00000481242 EYA1Q99502 592 aa10.95□□□□□ -0.66
GARNL3-216ENST00000481242 SBNO1A3KN83 1393 aa10.95□□□□□ -0.66
GARNL3-216ENST00000481242 ANAPC15P60006 121 aa10.95□□□□□ -0.66
GARNL3-216ENST00000481242 TTLL5Q6EMB2 1281 aa10.95□□□□□ -0.66
GARNL3-216ENST00000481242 TTC41PQ6P2S7 1318 aa10.95□□□□□ -0.66
GARNL3-216ENST00000481242 KIF2AO00139 706 aaPredicted RBP10.95□□□□□ -0.66
GARNL3-216ENST00000481242 CYP7A1P22680 504 aa10.95□□□□□ -0.66
GARNL3-216ENST00000481242 SLC39A6Q13433 755 aa10.95□□□□□ -0.66
GARNL3-216ENST00000481242 CERS3Q8IU89 383 aa10.95□□□□□ -0.66
GARNL3-216ENST00000481242 TESK2Q96S53 571 aa10.95□□□□□ -0.66
GARNL3-216ENST00000481242 SNRKQ9NRH2 765 aa10.95□□□□□ -0.66
GARNL3-216ENST00000481242 CALCOCO1Q9P1Z2 691 aa10.95□□□□□ -0.66
GARNL3-216ENST00000481242 MAP3K19Q56UN5 1328 aa10.95□□□□□ -0.66
GARNL3-216ENST00000481242 EPB41L2O43491 1005 aaKnown RBP10.95□□□□□ -0.66
GARNL3-216ENST00000481242 TRAPPC3LQ5T215 181 aa10.95□□□□□ -0.66
GARNL3-216ENST00000481242 TTC22Q5TAA0 569 aa10.95□□□□□ -0.66
GARNL3-216ENST00000481242 DDX19AQ9NUU7 478 aaKnown RBP10.95□□□□□ -0.66
GARNL3-216ENST00000481242 BTG4Q9NY30 223 aa10.95□□□□□ -0.66
GARNL3-216ENST00000481242 STK32BQ9NY57 414 aa10.95□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 19.4 ms