RNA–Protein interactions for RNA: ENST00000480996.1

KDM4C-208, Transcript of lysine demethylase 4C, human

TSL 3

Gene KDM4C, Length 405 nt, Biotype processed transcript, Subcellular localisation Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
KDM4C-208	ENST00000480996	RNF187	Q5TA31	235 aa	Predicted RBP	5.67	□□□□□ -1.5
KDM4C-208	ENST00000480996	AGBL1	Q96MI9	1066 aa		5.67	□□□□□ -1.5
KDM4C-208	ENST00000480996	KLF16	Q9BXK1	252 aa	Predicted RBP	5.67	□□□□□ -1.5
KDM4C-208	ENST00000480996	GIPC1	O14908	333 aa		5.66	□□□□□ -1.5
KDM4C-208	ENST00000480996	MICAL2	O94851	1124 aa		5.66	□□□□□ -1.5
KDM4C-208	ENST00000480996	ZIC2	O95409	532 aa	Predicted RBP	5.66	□□□□□ -1.5
KDM4C-208	ENST00000480996	GPC1	P35052	558 aa		5.66	□□□□□ -1.5
KDM4C-208	ENST00000480996	TXLNA	P40222	546 aa		5.66	□□□□□ -1.5
KDM4C-208	ENST00000480996	RELB	Q01201	579 aa		5.66	□□□□□ -1.5
KDM4C-208	ENST00000480996	C8orf34	Q49A92	452 aa		5.66	□□□□□ -1.5
KDM4C-208	ENST00000480996	GNAS	Q5JWF2	1037 aa		5.66	□□□□□ -1.5
KDM4C-208	ENST00000480996	SPRYD7	Q5W111	196 aa		5.66	□□□□□ -1.5
KDM4C-208	ENST00000480996	USP48	Q86UV5	1035 aa		5.66	□□□□□ -1.5
KDM4C-208	ENST00000480996	CKAP2L	Q8IYA6	745 aa		5.66	□□□□□ -1.5
KDM4C-208	ENST00000480996	MRFAP1L1	Q96HT8	127 aa		5.66	□□□□□ -1.5
KDM4C-208	ENST00000480996	OSBPL2	Q9H1P3	480 aa		5.66	□□□□□ -1.5
KDM4C-208	ENST00000480996	GGNBP2	Q9H3C7	697 aa		5.66	□□□□□ -1.5
KDM4C-208	ENST00000480996	CWC22	Q9HCG8	908 aa	Known RBP	5.66	□□□□□ -1.5
KDM4C-208	ENST00000480996	WDR3	Q9UNX4	943 aa	Known RBP eCLIP	5.66	□□□□□ -1.5
KDM4C-208	ENST00000480996	BCS1L	Q9Y276	419 aa		5.66	□□□□□ -1.5
KDM4C-208	ENST00000480996	hCG_2014768	A0A024R1R8	64 aa		5.65	□□□□□ -1.5
KDM4C-208	ENST00000480996	TGFBR3L	H3BV60	316 aa		5.65	□□□□□ -1.5
KDM4C-208	ENST00000480996	CPNE3	O75131	537 aa	Known RBP	5.65	□□□□□ -1.5
KDM4C-208	ENST00000480996	WDR4	P57081	412 aa	Known RBP	5.65	□□□□□ -1.5
KDM4C-208	ENST00000480996	IGBP1	P78318	339 aa		5.65	□□□□□ -1.5
KDM4C-208	ENST00000480996	NBPF1	Q3BBV0	1214 aa		5.65	□□□□□ -1.5
KDM4C-208	ENST00000480996	NOL8	Q76FK4	1167 aa	Known RBP	5.65	□□□□□ -1.5
KDM4C-208	ENST00000480996	SNIP1	Q8TAD8	396 aa	Known RBP	5.65	□□□□□ -1.5
KDM4C-208	ENST00000480996	RHPN1	Q8TCX5	695 aa		5.65	□□□□□ -1.5
KDM4C-208	ENST00000480996	C7orf43	Q8WVR3	580 aa		5.65	□□□□□ -1.5
KDM4C-208	ENST00000480996	BUD13	Q9BRD0	619 aa	Known RBP eCLIP	5.65	□□□□□ -1.5	2e-7	■■□□□ 13.1
KDM4C-208	ENST00000480996	GRIP2	Q9C0E4	1043 aa		5.65	□□□□□ -1.5
KDM4C-208	ENST00000480996	TMX1	Q9H3N1	280 aa		5.65	□□□□□ -1.5
KDM4C-208	ENST00000480996	METTL14	Q9HCE5	456 aa	Known RBP	5.65	□□□□□ -1.5
KDM4C-208	ENST00000480996	DDX41	Q9UJV9	622 aa	Known RBP	5.65	□□□□□ -1.5
KDM4C-208	ENST00000480996	GPC6	Q9Y625	555 aa	Predicted RBP	5.65	□□□□□ -1.5
KDM4C-208	ENST00000480996	CTSH	P09668	335 aa		5.64	□□□□□ -1.51
KDM4C-208	ENST00000480996	PLA2G4A	P47712	749 aa		5.64	□□□□□ -1.51
KDM4C-208	ENST00000480996	ANAPC15	P60006	121 aa		5.64	□□□□□ -1.51
KDM4C-208	ENST00000480996	SLC27A3	Q5K4L6	730 aa		5.64	□□□□□ -1.51
KDM4C-208	ENST00000480996	NBPF6	Q5VWK0	638 aa		5.64	□□□□□ -1.51
KDM4C-208	ENST00000480996	IER5	Q5VY09	327 aa		5.64	□□□□□ -1.51
KDM4C-208	ENST00000480996	RNF166	Q96A37	237 aa	Predicted RBP	5.64	□□□□□ -1.51
KDM4C-208	ENST00000480996	NBPF4	Q96M43	638 aa		5.64	□□□□□ -1.51
KDM4C-208	ENST00000480996	ZNF395	Q9H8N7	513 aa	Predicted RBP	5.64	□□□□□ -1.51
KDM4C-208	ENST00000480996	ZFAND3	Q9H8U3	227 aa		5.64	□□□□□ -1.51
KDM4C-208	ENST00000480996	ZDHHC3	Q9NYG2	299 aa		5.64	□□□□□ -1.51
KDM4C-208	ENST00000480996	GGT7	Q9UJ14	662 aa		5.64	□□□□□ -1.51
KDM4C-208	ENST00000480996		A6NHS1	94 aa		5.63	□□□□□ -1.51
KDM4C-208	ENST00000480996	OPLAH	O14841	1288 aa		5.63	□□□□□ -1.51
KDM4C-208	ENST00000480996	TIMP2	P16035	220 aa		5.63	□□□□□ -1.51
KDM4C-208	ENST00000480996	TNNI2	P48788	182 aa		5.63	□□□□□ -1.51
KDM4C-208	ENST00000480996	RNF144A	P50876	292 aa	Predicted RBP	5.63	□□□□□ -1.51
KDM4C-208	ENST00000480996	LARP7	Q4G0J3	582 aa	Known RBP eCLIP	5.63	□□□□□ -1.51
KDM4C-208	ENST00000480996	C4orf17	Q53FE4	359 aa		5.63	□□□□□ -1.51
KDM4C-208	ENST00000480996	ZNF697	Q5TEC3	545 aa		5.63	□□□□□ -1.51
KDM4C-208	ENST00000480996	XKR5	Q6UX68	686 aa		5.63	□□□□□ -1.51
KDM4C-208	ENST00000480996	ZNF598	Q86UK7	904 aa	Known RBP	5.63	□□□□□ -1.51
KDM4C-208	ENST00000480996	SUSD3	Q96L08	255 aa		5.63	□□□□□ -1.51
KDM4C-208	ENST00000480996	DMGDH	Q9UI17	866 aa	Known RBP	5.63	□□□□□ -1.51
KDM4C-208	ENST00000480996	FNDC3A	Q9Y2H6	1198 aa	Known RBP	5.63	□□□□□ -1.51
KDM4C-208	ENST00000480996	SBNO2	Q9Y2G9	1366 aa		5.63	□□□□□ -1.51
KDM4C-208	ENST00000480996	SPATA31C2	B4DYI2	1134 aa		5.62	□□□□□ -1.51
KDM4C-208	ENST00000480996	TNFRSF21	O75509	655 aa		5.62	□□□□□ -1.51
KDM4C-208	ENST00000480996	TAT	P17735	454 aa	Predicted RBP	5.62	□□□□□ -1.51
KDM4C-208	ENST00000480996	HSD3B2	P26439	372 aa		5.62	□□□□□ -1.51
KDM4C-208	ENST00000480996	IDH3A	P50213	366 aa		5.62	□□□□□ -1.51
KDM4C-208	ENST00000480996	PTPN12	Q05209	780 aa	Known RBP	5.62	□□□□□ -1.51
KDM4C-208	ENST00000480996	FOXC1	Q12948	553 aa		5.62	□□□□□ -1.51
KDM4C-208	ENST00000480996	TAF7L	Q5H9L4	462 aa		5.62	□□□□□ -1.51
KDM4C-208	ENST00000480996	EGFLAM	Q63HQ2	1017 aa		5.62	□□□□□ -1.51
KDM4C-208	ENST00000480996	NBPF10	Q6P3W6	841 aa	Known RBP	5.62	□□□□□ -1.51
KDM4C-208	ENST00000480996	MEIOB	Q8N635	442 aa		5.62	□□□□□ -1.51
KDM4C-208	ENST00000480996	SNX29	Q8TEQ0	813 aa		5.62	□□□□□ -1.51
KDM4C-208	ENST00000480996	CCDC74A	Q96AQ1	378 aa		5.62	□□□□□ -1.51
KDM4C-208	ENST00000480996	SRCIN1	Q9C0H9	1055 aa		5.62	□□□□□ -1.51
KDM4C-208	ENST00000480996	C12orf49	Q9H741	205 aa		5.62	□□□□□ -1.51
KDM4C-208	ENST00000480996	PKD2L1	Q9P0L9	805 aa		5.62	□□□□□ -1.51
KDM4C-208	ENST00000480996	ANKIB1	Q9P2G1	1089 aa		5.62	□□□□□ -1.51
KDM4C-208	ENST00000480996	TBX22	Q9Y458	520 aa		5.62	□□□□□ -1.51
KDM4C-208	ENST00000480996	U2SURP	O15042	1029 aa	Known RBP	5.61	□□□□□ -1.51
KDM4C-208	ENST00000480996	MARCH6	O60337	910 aa		5.61	□□□□□ -1.51
KDM4C-208	ENST00000480996	SSB	P05455	408 aa	Known RBP eCLIP	5.61	□□□□□ -1.51
KDM4C-208	ENST00000480996	ARSD	P51689	593 aa		5.61	□□□□□ -1.51
KDM4C-208	ENST00000480996	BMS1	Q14692	1282 aa	Known RBP	5.61	□□□□□ -1.51
KDM4C-208	ENST00000480996	PTPRO	Q16827	1216 aa		5.61	□□□□□ -1.51
KDM4C-208	ENST00000480996	ZNF394	Q53GI3	561 aa		5.61	□□□□□ -1.51
KDM4C-208	ENST00000480996	PDE12	Q6L8Q7	609 aa	Known RBP	5.61	□□□□□ -1.51
KDM4C-208	ENST00000480996	ZNF746	Q6NUN9	644 aa	Predicted RBP	5.61	□□□□□ -1.51
KDM4C-208	ENST00000480996	ZNF662	Q6ZS27	426 aa		5.61	□□□□□ -1.51
KDM4C-208	ENST00000480996	AIDA	Q96BJ3	306 aa		5.61	□□□□□ -1.51
KDM4C-208	ENST00000480996	TSEN34	Q9BSV6	310 aa	Known RBP	5.61	□□□□□ -1.51
KDM4C-208	ENST00000480996	USP31	Q70CQ4	1352 aa		5.6	□□□□□ -1.51
KDM4C-208	ENST00000480996		J3QL48	77 aa		5.6	□□□□□ -1.51
KDM4C-208	ENST00000480996	SPINT1	O43278	529 aa		5.6	□□□□□ -1.51
KDM4C-208	ENST00000480996	INPP5B	P32019	993 aa		5.6	□□□□□ -1.51
KDM4C-208	ENST00000480996	ST13	P50502	369 aa	Known RBP	5.6	□□□□□ -1.51
KDM4C-208	ENST00000480996	TAF1C	Q15572	869 aa	Predicted RBP	5.6	□□□□□ -1.51
KDM4C-208	ENST00000480996	IFFO2	Q5TF58	517 aa		5.6	□□□□□ -1.51
KDM4C-208	ENST00000480996	USPL1	Q5W0Q7	1092 aa		5.6	□□□□□ -1.51

Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms