RNA–Protein interactions for RNA: ENST00000480461.1

TRA2B-212, Transcript of transformer 2 beta homolog, humanhuman

TSL 1 (best)

Gene TRA2B, Length 538 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRA2B-212ENST00000480461 BICDL1Q6ZP65 573 aa15.65■□□□□ 0.1
TRA2B-212ENST00000480461 ZNF34Q8IZ26 560 aa15.65■□□□□ 0.1
TRA2B-212ENST00000480461 PI4KAP1Q8N8J0 262 aa15.65■□□□□ 0.1
TRA2B-212ENST00000480461 ZC3H4Q9UPT8 1303 aaKnown RBP15.65■□□□□ 0.1
TRA2B-212ENST00000480461 F6X3S4 739 aa15.64■□□□□ 0.09
TRA2B-212ENST00000480461 CHRNA5P30532 468 aa15.64■□□□□ 0.09
TRA2B-212ENST00000480461 TCIRG1Q13488 830 aa15.64■□□□□ 0.09
TRA2B-212ENST00000480461 KSR2Q6VAB6 950 aa15.64■□□□□ 0.09
TRA2B-212ENST00000480461 TIAM2Q8IVF5 1701 aa15.64■□□□□ 0.09
TRA2B-212ENST00000480461 SMC4Q9NTJ3 1288 aa15.64■□□□□ 0.09
TRA2B-212ENST00000480461 NOB1Q9ULX3 412 aaKnown RBP15.64■□□□□ 0.09
TRA2B-212ENST00000480461 MAP3K2Q9Y2U5 619 aa15.64■□□□□ 0.09
TRA2B-212ENST00000480461 POLRMTO00411 1230 aaKnown RBP15.63■□□□□ 0.09
TRA2B-212ENST00000480461 RGL2O15211 777 aa15.63■□□□□ 0.09
TRA2B-212ENST00000480461 RASSF7Q02833 373 aa15.63■□□□□ 0.09
TRA2B-212ENST00000480461 RIC3Q7Z5B4 369 aa15.63■□□□□ 0.09
TRA2B-212ENST00000480461 ATP5J2-PTCD1G3V325 749 aa15.62■□□□□ 0.09
TRA2B-212ENST00000480461 GPTP24298 496 aa15.62■□□□□ 0.09
TRA2B-212ENST00000480461 FKBP5Q13451 457 aaPredicted RBP15.62■□□□□ 0.09
TRA2B-212ENST00000480461 ISCA1Q9BUE6 129 aa15.62■□□□□ 0.09
TRA2B-212ENST00000480461 METTL22Q9BUU2 404 aaPredicted RBP15.62■□□□□ 0.09
TRA2B-212ENST00000480461 TNNQ9UQP3 1299 aa15.62■□□□□ 0.09
TRA2B-212ENST00000480461 UBN2Q6ZU65 1347 aa15.62■□□□□ 0.09
TRA2B-212ENST00000480461 IGKV5-2P06315 115 aa15.61■□□□□ 0.09
TRA2B-212ENST00000480461 SUSD4Q5VX71 490 aa15.61■□□□□ 0.09
TRA2B-212ENST00000480461 SETDB2Q96T68 719 aa15.61■□□□□ 0.09
TRA2B-212ENST00000480461 NIP7Q9Y221 180 aaKnown RBP eCLIP15.61■□□□□ 0.09
TRA2B-212ENST00000480461 DLEC1Q9Y238 1755 aa15.6■□□□□ 0.09
TRA2B-212ENST00000480461 SERPINB2P05120 415 aa15.6■□□□□ 0.09
TRA2B-212ENST00000480461 NLRP10Q86W26 655 aa15.6■□□□□ 0.09
TRA2B-212ENST00000480461 SYNE4Q8N205 404 aa15.6■□□□□ 0.09
TRA2B-212ENST00000480461 CCDC24Q8N4L8 307 aa15.6■□□□□ 0.09
TRA2B-212ENST00000480461 MYD88Q99836 296 aa15.6■□□□□ 0.09
TRA2B-212ENST00000480461 RCAN3Q9UKA8 241 aa15.6■□□□□ 0.09
TRA2B-212ENST00000480461 ZNF652Q9Y2D9 606 aa15.6■□□□□ 0.09
TRA2B-212ENST00000480461 GLTPD2A6NH11 291 aa15.59■□□□□ 0.09
TRA2B-212ENST00000480461 FAM177BA6PVY3 158 aa15.59■□□□□ 0.09
TRA2B-212ENST00000480461 DDX58O95786 925 aaKnown RBP15.59■□□□□ 0.09
TRA2B-212ENST00000480461 VEGFAP15692 232 aaPredicted RBP15.59■□□□□ 0.09
TRA2B-212ENST00000480461 TRIM28Q13263 835 aaKnown RBP15.59■□□□□ 0.09
TRA2B-212ENST00000480461 DNAAF4Q8WXU2 420 aa15.59■□□□□ 0.09
TRA2B-212ENST00000480461 SCN7AQ01118 1682 aa15.58■□□□□ 0.08
TRA2B-212ENST00000480461 BCORQ6W2J9 1755 aa15.58■□□□□ 0.08
TRA2B-212ENST00000480461 LMNB1P20700 586 aa15.58■□□□□ 0.08
TRA2B-212ENST00000480461 CWF19L2Q2TBE0 894 aaKnown RBP15.58■□□□□ 0.08
TRA2B-212ENST00000480461 BEND3Q5T5X7 828 aa15.58■□□□□ 0.08
TRA2B-212ENST00000480461 NRXN2Q9P2S2 1712 aa15.57■□□□□ 0.08
TRA2B-212ENST00000480461 ARHGAP45Q92619 1136 aa15.57■□□□□ 0.08
TRA2B-212ENST00000480461 JARID2Q92833 1246 aaPredicted RBP15.57■□□□□ 0.08
TRA2B-212ENST00000480461 FRAT1Q92837 279 aaPredicted RBP15.57■□□□□ 0.08
TRA2B-212ENST00000480461 PTPRCP08575 1304 aa15.57■□□□□ 0.08
TRA2B-212ENST00000480461 NUP98P52948 1817 aa15.57■□□□□ 0.08
TRA2B-212ENST00000480461 PLIN1O60240 522 aa15.56■□□□□ 0.08
TRA2B-212ENST00000480461 NTSR2O95665 410 aa15.56■□□□□ 0.08
TRA2B-212ENST00000480461 TRIM27P14373 513 aa15.56■□□□□ 0.08
TRA2B-212ENST00000480461 HSP90AB3PQ58FF7 597 aa15.56■□□□□ 0.08
TRA2B-212ENST00000480461 PRR5LQ6MZQ0 368 aa15.56■□□□□ 0.08
TRA2B-212ENST00000480461 NUTM1Q86Y26 1132 aa15.56■□□□□ 0.08
TRA2B-212ENST00000480461 AFDNP55196 1824 aaKnown RBP15.56■□□□□ 0.08
TRA2B-212ENST00000480461 NEURL1BA8MQ27 555 aa15.55■□□□□ 0.08
TRA2B-212ENST00000480461 POTECB2RU33 542 aa15.55■□□□□ 0.08
TRA2B-212ENST00000480461 SLC34A2O95436 690 aa15.55■□□□□ 0.08
TRA2B-212ENST00000480461 ERFEQ4G0M1 354 aa15.55■□□□□ 0.08
TRA2B-212ENST00000480461 SLC4A10Q6U841 1118 aa15.55■□□□□ 0.08
TRA2B-212ENST00000480461 NBPF5PQ86XG9 351 aaPredicted RBP15.55■□□□□ 0.08
TRA2B-212ENST00000480461 LINS1Q8NG48 757 aa15.55■□□□□ 0.08
TRA2B-212ENST00000480461 CARMIL3Q8ND23 1372 aa15.54■□□□□ 0.08
TRA2B-212ENST00000480461 RLBP1P12271 317 aa15.54■□□□□ 0.08
TRA2B-212ENST00000480461 PARP10Q53GL7 1025 aa15.54■□□□□ 0.08
TRA2B-212ENST00000480461 ATF7IPQ6VMQ6 1270 aa15.54■□□□□ 0.08
TRA2B-212ENST00000480461 TPTE2Q6XPS3 522 aa15.54■□□□□ 0.08
TRA2B-212ENST00000480461 CCDC191Q8NCU4 936 aa15.54■□□□□ 0.08
TRA2B-212ENST00000480461 FAM89AQ96GI7 184 aa15.54■□□□□ 0.08
TRA2B-212ENST00000480461 UTP14AQ9BVJ6 771 aaKnown RBP15.54■□□□□ 0.08
TRA2B-212ENST00000480461 CACNA1FO60840 1977 aa15.54■□□□□ 0.08
TRA2B-212ENST00000480461 CCDC88AQ3V6T2 1871 aa15.53■□□□□ 0.08
TRA2B-212ENST00000480461 NFKBIEO00221 500 aa15.53■□□□□ 0.08
TRA2B-212ENST00000480461 GCKRQ14397 625 aa15.53■□□□□ 0.08
TRA2B-212ENST00000480461 RTL5Q5HYW3 569 aaPredicted RBP15.53■□□□□ 0.08
TRA2B-212ENST00000480461 C3orf67Q6ZVT6 689 aa15.53■□□□□ 0.08
TRA2B-212ENST00000480461 CLUAP1Q96AJ1 413 aa15.53■□□□□ 0.08
TRA2B-212ENST00000480461 TRMT112Q9UI30 125 aaKnown RBP15.53■□□□□ 0.08
TRA2B-212ENST00000480461 ARFGEF2Q9Y6D5 1785 aa15.53■□□□□ 0.08
TRA2B-212ENST00000480461 KIF16BQ96L93 1317 aa15.52■□□□□ 0.08
TRA2B-212ENST00000480461 H7C1W4 665 aa15.52■□□□□ 0.08
TRA2B-212ENST00000480461 IPO8O15397 1037 aaKnown RBP15.52■□□□□ 0.08
TRA2B-212ENST00000480461 CASP7P55210 303 aa15.52■□□□□ 0.08
TRA2B-212ENST00000480461 SLC10A5Q5PT55 438 aa15.52■□□□□ 0.08
TRA2B-212ENST00000480461 ZKSCAN2Q63HK3 967 aa15.52■□□□□ 0.08
TRA2B-212ENST00000480461 PPP1R42Q7Z4L9 355 aa15.52■□□□□ 0.08
TRA2B-212ENST00000480461 API5Q9BZZ5 524 aaKnown RBP15.52■□□□□ 0.08
TRA2B-212ENST00000480461 CREBZFQ9NS37 354 aa15.52■□□□□ 0.08
TRA2B-212ENST00000480461 CWC25Q9NXE8 425 aaPredicted RBP15.52■□□□□ 0.08
TRA2B-212ENST00000480461 ABCC4O15439 1325 aa15.51■□□□□ 0.07
TRA2B-212ENST00000480461 FOXN1O15353 648 aa15.51■□□□□ 0.07
TRA2B-212ENST00000480461 HCLS1P14317 486 aaPredicted RBP15.51■□□□□ 0.07
TRA2B-212ENST00000480461 NEXNQ0ZGT2 675 aa15.51■□□□□ 0.07
TRA2B-212ENST00000480461 C20orf194Q5TEA3 1177 aa15.51■□□□□ 0.07
TRA2B-212ENST00000480461 CNBD1Q8NA66 436 aa15.51■□□□□ 0.07
TRA2B-212ENST00000480461 ZBTB38Q8NAP3 1195 aaPredicted RBP15.51■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 52.4 ms