RNA–Protein interactions for RNA: ENST00000480342.5

RERE-213, Transcript of arginine-glutamic acid dipeptide repeats, humanhuman

TSL 2

Gene RERE, Length 2,710 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RERE-213ENST00000480342 NBPF6Q5VWK0 638 aa11.87□□□□□ -0.51
RERE-213ENST00000480342 FAM173BQ6P4H8 233 aa11.87□□□□□ -0.51
RERE-213ENST00000480342 LTV1Q96GA3 475 aaPredicted RBP11.87□□□□□ -0.51
RERE-213ENST00000480342 NBPF4Q96M43 638 aa11.87□□□□□ -0.51
RERE-213ENST00000480342 LRP6O75581 1613 aa11.86□□□□□ -0.51
RERE-213ENST00000480342 COL16A1Q07092 1604 aaPredicted RBP11.86□□□□□ -0.51
RERE-213ENST00000480342 PAPPAQ13219 1627 aa11.86□□□□□ -0.51
RERE-213ENST00000480342 TAF7Q15545 349 aaPredicted RBP11.86□□□□□ -0.51
RERE-213ENST00000480342 ATP2B3Q16720 1220 aa11.86□□□□□ -0.51
RERE-213ENST00000480342 NECAB1Q8N987 351 aa11.86□□□□□ -0.51
RERE-213ENST00000480342 BCL2L12Q9HB09 334 aa11.86□□□□□ -0.51
RERE-213ENST00000480342 ZSCAN21Q9Y5A6 473 aaPredicted RBP11.86□□□□□ -0.51
RERE-213ENST00000480342 PHLPP1O60346 1717 aa11.86□□□□□ -0.51
RERE-213ENST00000480342 COL5A2P05997 1499 aaPredicted RBP11.86□□□□□ -0.51
RERE-213ENST00000480342 SGSM2O43147 1006 aa11.86□□□□□ -0.51
RERE-213ENST00000480342 IGSF3O75054 1194 aa11.86□□□□□ -0.51
RERE-213ENST00000480342 OS9Q13438 667 aaPredicted RBP11.86□□□□□ -0.51
RERE-213ENST00000480342 KCNF1Q9H3M0 494 aa11.86□□□□□ -0.51
RERE-213ENST00000480342 LETM1O95202 739 aaPredicted RBP11.85□□□□□ -0.51
RERE-213ENST00000480342 ADCK5Q3MIX3 580 aa11.85□□□□□ -0.51
RERE-213ENST00000480342 PRPF40BQ6NWY9 871 aaKnown RBP11.85□□□□□ -0.51
RERE-213ENST00000480342 RHPN1Q8TCX5 695 aa11.85□□□□□ -0.51
RERE-213ENST00000480342 JAKMIP1Q96N16 626 aaKnown RBP11.85□□□□□ -0.51
RERE-213ENST00000480342 RAD50Q92878 1312 aa11.85□□□□□ -0.51
RERE-213ENST00000480342 RIOK3O14730 519 aaKnown RBP11.85□□□□□ -0.51
RERE-213ENST00000480342 TTC14Q96N46 770 aa11.85□□□□□ -0.51
RERE-213ENST00000480342 LSG1Q9H089 658 aaKnown RBP11.85□□□□□ -0.51
RERE-213ENST00000480342 SHANK3Q9BYB0 1731 aa11.84□□□□□ -0.51
RERE-213ENST00000480342 NBPF7P0C2Y1 421 aaPredicted RBP11.84□□□□□ -0.51
RERE-213ENST00000480342 C1orf141Q5JVX7 400 aa11.84□□□□□ -0.51
RERE-213ENST00000480342 CKAP2LQ8IYA6 745 aa11.84□□□□□ -0.51
RERE-213ENST00000480342 TMEM87AQ8NBN3 555 aa11.84□□□□□ -0.51
RERE-213ENST00000480342 PI4K2BQ8TCG2 481 aa11.84□□□□□ -0.51
RERE-213ENST00000480342 ATP6V1DQ9Y5K8 247 aa11.84□□□□□ -0.51
RERE-213ENST00000480342 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP11.84□□□□□ -0.51
RERE-213ENST00000480342 ZSCAN20P17040 1043 aaPredicted RBP11.84□□□□□ -0.51
RERE-213ENST00000480342 PTH1RQ03431 593 aa11.84□□□□□ -0.51
RERE-213ENST00000480342 CHAF1AQ13111 956 aaPredicted RBP11.84□□□□□ -0.51
RERE-213ENST00000480342 DRC7Q8IY82 874 aa11.84□□□□□ -0.51
RERE-213ENST00000480342 CNTROBQ8N137 903 aa11.84□□□□□ -0.51
RERE-213ENST00000480342 TCEANC2Q96MN5 208 aa11.84□□□□□ -0.51
RERE-213ENST00000480342 DIAPH3Q9NSV4 1193 aa11.84□□□□□ -0.51
RERE-213ENST00000480342 WDR17Q8IZU2 1322 aa11.84□□□□□ -0.51
RERE-213ENST00000480342 ANXA1P04083 346 aa11.83□□□□□ -0.52
RERE-213ENST00000480342 TATP17735 454 aaPredicted RBP11.83□□□□□ -0.52
RERE-213ENST00000480342 PTGS1P23219 599 aa11.83□□□□□ -0.52
RERE-213ENST00000480342 LUZP1Q86V48 1076 aa11.83□□□□□ -0.52
RERE-213ENST00000480342 KIAA1524Q8TCG1 905 aa11.83□□□□□ -0.52
RERE-213ENST00000480342 PDRG1Q9NUG6 133 aa11.83□□□□□ -0.52
RERE-213ENST00000480342 HYPKQ9NX55 129 aa11.83□□□□□ -0.52
RERE-213ENST00000480342 UBR2Q8IWV8 1755 aa11.83□□□□□ -0.52
RERE-213ENST00000480342 PLEKHG5O94827 1062 aa11.83□□□□□ -0.52
RERE-213ENST00000480342 HDGFL1Q5TGJ6 251 aa11.83□□□□□ -0.52
RERE-213ENST00000480342 PDCL2Q8N4E4 241 aa11.83□□□□□ -0.52
RERE-213ENST00000480342 RAPGEF4Q8WZA2 1011 aa11.83□□□□□ -0.52
RERE-213ENST00000480342 SPTLC3Q9NUV7 552 aa11.83□□□□□ -0.52
RERE-213ENST00000480342 NRAPQ86VF7 1730 aa11.83□□□□□ -0.52
RERE-213ENST00000480342 U2AF2P26368 475 aaKnown RBP eCLIP11.82□□□□□ -0.528e-8■□□□□ 10.7
RERE-213ENST00000480342 KCNJ4P48050 445 aa11.82□□□□□ -0.52
RERE-213ENST00000480342 LRRC59Q96AG4 307 aaKnown RBP11.82□□□□□ -0.52
RERE-213ENST00000480342 MTMR6Q9Y217 621 aa11.82□□□□□ -0.52
RERE-213ENST00000480342 CCDC192P0DO97 292 aa11.82□□□□□ -0.52
RERE-213ENST00000480342 COL9A3Q14050 684 aaPredicted RBP11.82□□□□□ -0.52
RERE-213ENST00000480342 LMOD2Q6P5Q4 547 aa11.82□□□□□ -0.52
RERE-213ENST00000480342 SSH3Q8TE77 659 aa11.82□□□□□ -0.52
RERE-213ENST00000480342 FUCA2Q9BTY2 467 aa11.82□□□□□ -0.52
RERE-213ENST00000480342 TFIP11Q9UBB9 837 aaKnown RBP11.82□□□□□ -0.52
RERE-213ENST00000480342 HEG1Q9ULI3 1381 aa11.82□□□□□ -0.52
RERE-213ENST00000480342 LRMPQ12912 555 aa11.81□□□□□ -0.52
RERE-213ENST00000480342 LARP1BQ659C4 914 aaKnown RBP11.81□□□□□ -0.52
RERE-213ENST00000480342 ZNF530Q6P9A1 599 aaPredicted RBP11.81□□□□□ -0.52
RERE-213ENST00000480342 USHBP1Q8N6Y0 703 aa11.81□□□□□ -0.52
RERE-213ENST00000480342 MEGF6O75095 1541 aa11.81□□□□□ -0.52
RERE-213ENST00000480342 LIG1P18858 919 aa11.81□□□□□ -0.52
RERE-213ENST00000480342 GTF2F1P35269 517 aaKnown RBP eCLIP11.81□□□□□ -0.522e-6■■■■■ 30.7
RERE-213ENST00000480342 DMTNQ08495 405 aa11.81□□□□□ -0.52
RERE-213ENST00000480342 ME3Q16798 604 aa11.81□□□□□ -0.52
RERE-213ENST00000480342 IL17REQ8NFR9 667 aa11.81□□□□□ -0.52
RERE-213ENST00000480342 C16orf45Q96MC5 204 aaPredicted RBP11.81□□□□□ -0.52
RERE-213ENST00000480342 NRBP1Q9UHY1 535 aa11.81□□□□□ -0.52
RERE-213ENST00000480342 RNMTO43148 476 aaKnown RBP11.8□□□□□ -0.52
RERE-213ENST00000480342 KIF1BPQ96EK5 621 aa11.8□□□□□ -0.52
RERE-213ENST00000480342 CYP46A1Q9Y6A2 500 aa11.8□□□□□ -0.52
RERE-213ENST00000480342 GOLGA6L4A6NEF3 574 aa11.8□□□□□ -0.52
RERE-213ENST00000480342 STK3Q13188 491 aa11.8□□□□□ -0.52
RERE-213ENST00000480342 CCDC186Q7Z3E2 898 aa11.8□□□□□ -0.52
RERE-213ENST00000480342 CARD10Q9BWT7 1032 aa11.8□□□□□ -0.52
RERE-213ENST00000480342 GOLGA6L6A8MZA4 724 aa11.8□□□□□ -0.52
RERE-213ENST00000480342 RAB11FIP3O75154 756 aa11.8□□□□□ -0.52
RERE-213ENST00000480342 CDC37L1Q7L3B6 337 aa11.8□□□□□ -0.52
RERE-213ENST00000480342 TTC6Q86TZ1 520 aa11.8□□□□□ -0.52
RERE-213ENST00000480342 AXIN2Q9Y2T1 843 aa11.8□□□□□ -0.52
RERE-213ENST00000480342 PI4KAP2A4QPH2 592 aa11.79□□□□□ -0.52
RERE-213ENST00000480342 PI4KAP1Q8N8J0 262 aa11.79□□□□□ -0.52
RERE-213ENST00000480342 TPCN1Q9ULQ1 816 aa11.79□□□□□ -0.52
RERE-213ENST00000480342 PA2G4Q9UQ80 394 aaKnown RBP11.79□□□□□ -0.52
RERE-213ENST00000480342 TEFQ10587 303 aa11.79□□□□□ -0.52
RERE-213ENST00000480342 ST3GAL1Q11201 340 aa11.79□□□□□ -0.52
RERE-213ENST00000480342 NAA30Q147X3 362 aaPredicted RBP11.79□□□□□ -0.52
RERE-213ENST00000480342 MAP3K11Q16584 847 aa11.79□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 35.3 ms