RNA–Protein interactions for RNA: ENST00000480158.1

HERC4-210, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase 4, humanhuman

TSL 2

Gene HERC4, Length 2,438 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC4-210ENST00000480158 TAF1LQ8IZX4 1826 aa8.11□□□□□ -1.11
HERC4-210ENST00000480158 NBPF7P0C2Y1 421 aaPredicted RBP8.1□□□□□ -1.11
HERC4-210ENST00000480158 SSFA2P28290 1259 aa8.1□□□□□ -1.11
HERC4-210ENST00000480158 TCIRG1Q13488 830 aa8.1□□□□□ -1.11
HERC4-210ENST00000480158 LINS1Q8NG48 757 aa8.1□□□□□ -1.11
HERC4-210ENST00000480158 C9orf78Q9NZ63 289 aaPredicted RBP8.1□□□□□ -1.11
HERC4-210ENST00000480158 NIP7Q9Y221 180 aaKnown RBP eCLIP8.1□□□□□ -1.11
HERC4-210ENST00000480158 ZNF831Q5JPB2 1677 aa8.1□□□□□ -1.11
HERC4-210ENST00000480158 PNPLA7Q6ZV29 1317 aa8.1□□□□□ -1.11
HERC4-210ENST00000480158 NEURL1BA8MQ27 555 aa8.1□□□□□ -1.11
HERC4-210ENST00000480158 ERVV-1B6SEH8 477 aa8.1□□□□□ -1.11
HERC4-210ENST00000480158 TBC1D9BQ66K14 1250 aa8.1□□□□□ -1.11
HERC4-210ENST00000480158 SYNE4Q8N205 404 aa8.1□□□□□ -1.11
HERC4-210ENST00000480158 CCDC24Q8N4L8 307 aa8.1□□□□□ -1.11
HERC4-210ENST00000480158 BCL2L12Q9HB09 334 aa8.1□□□□□ -1.11
HERC4-210ENST00000480158 USP42Q9H9J4 1324 aaKnown RBP8.09□□□□□ -1.11
HERC4-210ENST00000480158 PSDA5PKW4 1024 aaPredicted RBP8.09□□□□□ -1.11
HERC4-210ENST00000480158 ZBTB7BO15156 539 aaPredicted RBP8.09□□□□□ -1.11
HERC4-210ENST00000480158 R3HDM1Q15032 1099 aaKnown RBP8.09□□□□□ -1.11
HERC4-210ENST00000480158 FAM89AQ96GI7 184 aa8.09□□□□□ -1.11
HERC4-210ENST00000480158 USP44Q9H0E7 712 aa8.09□□□□□ -1.11
HERC4-210ENST00000480158 DDX19BQ9UMR2 479 aa8.09□□□□□ -1.11
HERC4-210ENST00000480158 ZNF652Q9Y2D9 606 aa8.09□□□□□ -1.11
HERC4-210ENST00000480158 CICQ96RK0 1608 aaPredicted RBP8.09□□□□□ -1.11
HERC4-210ENST00000480158 GYS1P13807 737 aa8.09□□□□□ -1.11
HERC4-210ENST00000480158 GCKRQ14397 625 aa8.09□□□□□ -1.11
HERC4-210ENST00000480158 UBE3BQ7Z3V4 1068 aa8.09□□□□□ -1.11
HERC4-210ENST00000480158 CWC25Q9NXE8 425 aaPredicted RBP8.09□□□□□ -1.11
HERC4-210ENST00000480158 UBN2Q6ZU65 1347 aa8.08□□□□□ -1.12
HERC4-210ENST00000480158 NPHP1O15259 732 aa8.08□□□□□ -1.12
HERC4-210ENST00000480158 CAPN15O75808 1086 aa8.08□□□□□ -1.12
HERC4-210ENST00000480158 SUSD4Q5VX71 490 aa8.08□□□□□ -1.12
HERC4-210ENST00000480158 NLRP10Q86W26 655 aa8.08□□□□□ -1.12
HERC4-210ENST00000480158 NUTM1Q86Y26 1132 aa8.08□□□□□ -1.12
HERC4-210ENST00000480158 SETDB2Q96T68 719 aa8.08□□□□□ -1.12
HERC4-210ENST00000480158 TRMT112Q9UI30 125 aaKnown RBP8.08□□□□□ -1.12
HERC4-210ENST00000480158 GOLGB1Q14789 3259 aaKnown RBP8.08□□□□□ -1.12
HERC4-210ENST00000480158 RREB1Q92766 1687 aa8.08□□□□□ -1.12
HERC4-210ENST00000480158 GRM8O00222 908 aa8.08□□□□□ -1.12
HERC4-210ENST00000480158 UBTFL1P0CB47 393 aaPredicted RBP8.08□□□□□ -1.12
HERC4-210ENST00000480158 HMGB2P26583 209 aaKnown RBP8.08□□□□□ -1.12
HERC4-210ENST00000480158 HSP90AB3PQ58FF7 597 aa8.08□□□□□ -1.12
HERC4-210ENST00000480158 ZNF34Q8IZ26 560 aa8.08□□□□□ -1.12
HERC4-210ENST00000480158 ISCA1Q9BUE6 129 aa8.08□□□□□ -1.12
HERC4-210ENST00000480158 ARFGEF2Q9Y6D5 1785 aa8.07□□□□□ -1.12
HERC4-210ENST00000480158 ALDH1L1O75891 902 aa8.07□□□□□ -1.12
HERC4-210ENST00000480158 GTF2E1P29083 439 aaPredicted RBP8.07□□□□□ -1.12
HERC4-210ENST00000480158 NFIXQ14938 502 aa8.07□□□□□ -1.12
HERC4-210ENST00000480158 CLEC4GQ6UXB4 293 aa8.07□□□□□ -1.12
HERC4-210ENST00000480158 CCDC191Q8NCU4 936 aa8.07□□□□□ -1.12
HERC4-210ENST00000480158 CCDC85AQ96PX6 553 aaPredicted RBP8.07□□□□□ -1.12
HERC4-210ENST00000480158 BCL11AQ9H165 835 aa8.07□□□□□ -1.12
HERC4-210ENST00000480158 ZBTB40Q9NUA8 1239 aa8.07□□□□□ -1.12
HERC4-210ENST00000480158 LRRFIP2Q9Y608 721 aaKnown RBP8.07□□□□□ -1.12
HERC4-210ENST00000480158 CACNA1FO60840 1977 aa8.07□□□□□ -1.12
HERC4-210ENST00000480158 ZBTB7AO95365 584 aa8.07□□□□□ -1.12
HERC4-210ENST00000480158 B4GALNT3Q6L9W6 998 aa8.07□□□□□ -1.12
HERC4-210ENST00000480158 NBPF5PQ86XG9 351 aaPredicted RBP8.07□□□□□ -1.12
HERC4-210ENST00000480158 FLAD1Q8NFF5 587 aa8.07□□□□□ -1.12
HERC4-210ENST00000480158 CIZ1Q9ULV3 898 aaPredicted RBP8.07□□□□□ -1.12
HERC4-210ENST00000480158 ATP10DQ9P241 1426 aa8.06□□□□□ -1.12
HERC4-210ENST00000480158 UBR3Q6ZT12 1888 aa8.06□□□□□ -1.12
HERC4-210ENST00000480158 GNAI3P08754 354 aa8.06□□□□□ -1.12
HERC4-210ENST00000480158 HCLS1P14317 486 aaPredicted RBP8.06□□□□□ -1.12
HERC4-210ENST00000480158 PCDHB15Q9Y5E8 787 aa8.06□□□□□ -1.12
HERC4-210ENST00000480158 NUP188Q5SRE5 1749 aa8.06□□□□□ -1.12
HERC4-210ENST00000480158 RGPD3A6NKT7 1758 aaPredicted RBP8.06□□□□□ -1.12
HERC4-210ENST00000480158 RGPD4Q7Z3J3 1758 aa8.06□□□□□ -1.12
HERC4-210ENST00000480158 GNAI2P04899 355 aa8.05□□□□□ -1.12
HERC4-210ENST00000480158 SUCLG2Q96I99 432 aa8.05□□□□□ -1.12
HERC4-210ENST00000480158 UTP14AQ9BVJ6 771 aaKnown RBP8.05□□□□□ -1.12
HERC4-210ENST00000480158 CHMP3Q9Y3E7 222 aa8.05□□□□□ -1.12
HERC4-210ENST00000480158 PXDNLA1KZ92 1463 aa8.05□□□□□ -1.12
HERC4-210ENST00000480158 C4AP0C0L4 1744 aa8.05□□□□□ -1.12
HERC4-210ENST00000480158 MMP10P09238 476 aa8.05□□□□□ -1.12
HERC4-210ENST00000480158 TRIM28Q13263 835 aaKnown RBP8.05□□□□□ -1.12
HERC4-210ENST00000480158 ERFEQ4G0M1 354 aa8.05□□□□□ -1.12
HERC4-210ENST00000480158 EPHA10Q5JZY3 1008 aa8.05□□□□□ -1.12
HERC4-210ENST00000480158 PPP1R42Q7Z4L9 355 aa8.05□□□□□ -1.12
HERC4-210ENST00000480158 HS6ST3Q8IZP7 471 aa8.05□□□□□ -1.12
HERC4-210ENST00000480158 NLGN1Q8N2Q7 840 aa8.05□□□□□ -1.12
HERC4-210ENST00000480158 ZBTB38Q8NAP3 1195 aaPredicted RBP8.05□□□□□ -1.12
HERC4-210ENST00000480158 BICC1Q9H694 974 aaKnown RBP8.05□□□□□ -1.12
HERC4-210ENST00000480158 H7C1W4 665 aa8.04□□□□□ -1.12
HERC4-210ENST00000480158 IRS4O14654 1257 aaPredicted RBP8.04□□□□□ -1.12
HERC4-210ENST00000480158 DDR1Q08345 913 aa8.04□□□□□ -1.12
HERC4-210ENST00000480158 PARP10Q53GL7 1025 aa8.04□□□□□ -1.12
HERC4-210ENST00000480158 KAZALD1Q96I82 304 aa8.04□□□□□ -1.12
HERC4-210ENST00000480158 CCDC136Q96JN2 1154 aa8.04□□□□□ -1.12
HERC4-210ENST00000480158 NUP98P52948 1817 aa8.04□□□□□ -1.12
HERC4-210ENST00000480158 SH3TC1Q8TE82 1336 aa8.04□□□□□ -1.12
HERC4-210ENST00000480158 NTSR2O95665 410 aa8.04□□□□□ -1.12
HERC4-210ENST00000480158 SERPINB2P05120 415 aa8.04□□□□□ -1.12
HERC4-210ENST00000480158 PCCAP05165 728 aaPredicted RBP8.04□□□□□ -1.12
HERC4-210ENST00000480158 TM4SF1P30408 202 aa8.04□□□□□ -1.12
HERC4-210ENST00000480158 TPTE2Q6XPS3 522 aa8.04□□□□□ -1.12
HERC4-210ENST00000480158 ERICH6Q7L0X2 663 aa8.04□□□□□ -1.12
HERC4-210ENST00000480158 CHMP4BQ9H444 224 aaKnown RBP8.04□□□□□ -1.12
HERC4-210ENST00000480158 TUBGCP6Q96RT7 1819 aa8.04□□□□□ -1.12
HERC4-210ENST00000480158 CASP7P55210 303 aa8.03□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms