RNA–Protein interactions for RNA: ENST00000480023.1

C9orf78-205, Transcript of chromosome 9 open reading frame 78, humanhuman

TSL 2

Gene C9orf78, Length 2,143 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf78-205ENST00000480023 FOXO3O43524 673 aa16.01■□□□□ 0.15
C9orf78-205ENST00000480023 IQCB1Q15051 598 aa16.01■□□□□ 0.15
C9orf78-205ENST00000480023 HSP90AB2PQ58FF8 381 aa16.01■□□□□ 0.15
C9orf78-205ENST00000480023 PRPF40BQ6NWY9 871 aaKnown RBP16.01■□□□□ 0.15
C9orf78-205ENST00000480023 FBXO38Q6PIJ6 1188 aa16.01■□□□□ 0.15
C9orf78-205ENST00000480023 ALDH8A1Q9H2A2 487 aaPredicted RBP16.01■□□□□ 0.15
C9orf78-205ENST00000480023 RIMS1Q86UR5 1692 aaKnown RBP16.01■□□□□ 0.15
C9orf78-205ENST00000480023 KIF2AO00139 706 aaPredicted RBP16.01■□□□□ 0.15
C9orf78-205ENST00000480023 RAPGEF3O95398 923 aa16.01■□□□□ 0.15
C9orf78-205ENST00000480023 HSP90AB4PQ58FF6 505 aa16.01■□□□□ 0.15
C9orf78-205ENST00000480023 TIGD1Q96MW7 591 aa16.01■□□□□ 0.15
C9orf78-205ENST00000480023 DNAJC25Q9H1X3 360 aa16.01■□□□□ 0.15
C9orf78-205ENST00000480023 CHMP3Q9Y3E7 222 aa16.01■□□□□ 0.15
C9orf78-205ENST00000480023 ZKSCAN1P17029 563 aaPredicted RBP16■□□□□ 0.15
C9orf78-205ENST00000480023 FERMT3Q86UX7 667 aa16■□□□□ 0.15
C9orf78-205ENST00000480023 NECAB1Q8N987 351 aa16■□□□□ 0.15
C9orf78-205ENST00000480023 NCKAP5LQ9HCH0 1330 aa16■□□□□ 0.15
C9orf78-205ENST00000480023 USP27XA6NNY8 438 aa16■□□□□ 0.15
C9orf78-205ENST00000480023 NR1I2O75469 434 aa16■□□□□ 0.15
C9orf78-205ENST00000480023 IRX5P78411 483 aaPredicted RBP16■□□□□ 0.15
C9orf78-205ENST00000480023 FAM173BQ6P4H8 233 aa16■□□□□ 0.15
C9orf78-205ENST00000480023 CALCOCO1Q9P1Z2 691 aa16■□□□□ 0.15
C9orf78-205ENST00000480023 ANKRD1Q15327 319 aa15.99■□□□□ 0.15
C9orf78-205ENST00000480023 ZNF592Q92610 1267 aa15.99■□□□□ 0.15
C9orf78-205ENST00000480023 SNRKQ9NRH2 765 aa15.99■□□□□ 0.15
C9orf78-205ENST00000480023 BABAM1Q9NWV8 329 aa15.99■□□□□ 0.15
C9orf78-205ENST00000480023 TOPAZ1Q8N9V7 1692 aa15.99■□□□□ 0.15
C9orf78-205ENST00000480023 TULP2O00295 520 aa15.98■□□□□ 0.15
C9orf78-205ENST00000480023 SLU7O95391 586 aaKnown RBP15.98■□□□□ 0.15
C9orf78-205ENST00000480023 PSMA5P28066 241 aa15.98■□□□□ 0.15
C9orf78-205ENST00000480023 CCZ1BP86790 482 aa15.98■□□□□ 0.15
C9orf78-205ENST00000480023 CCZ1P86791 482 aaPredicted RBP15.98■□□□□ 0.15
C9orf78-205ENST00000480023 FBXO31Q5XUX0 539 aaPredicted RBP15.98■□□□□ 0.15
C9orf78-205ENST00000480023 PGBD1Q96JS3 809 aa15.98■□□□□ 0.15
C9orf78-205ENST00000480023 PRR36Q9H6K5 1346 aa15.98■□□□□ 0.15
C9orf78-205ENST00000480023 SRGAP3O43295 1099 aa15.98■□□□□ 0.15
C9orf78-205ENST00000480023 SKILP12757 684 aa15.98■□□□□ 0.15
C9orf78-205ENST00000480023 H2AFXP16104 143 aaPredicted RBP15.98■□□□□ 0.15
C9orf78-205ENST00000480023 ELF2Q15723 593 aa15.98■□□□□ 0.15
C9orf78-205ENST00000480023 CREB3L3Q68CJ9 461 aa15.98■□□□□ 0.15
C9orf78-205ENST00000480023 CCAR2Q8N163 923 aaKnown RBP15.98■□□□□ 0.15
C9orf78-205ENST00000480023 L2HGDHQ9H9P8 463 aa15.98■□□□□ 0.15
C9orf78-205ENST00000480023 KCNJ4P48050 445 aa15.97■□□□□ 0.15
C9orf78-205ENST00000480023 MAP4K1Q92918 833 aa15.97■□□□□ 0.15
C9orf78-205ENST00000480023 ZNF446Q9NWS9 450 aa15.97■□□□□ 0.15
C9orf78-205ENST00000480023 STAG3Q9UJ98 1225 aa15.97■□□□□ 0.15
C9orf78-205ENST00000480023 ADCY9O60503 1353 aa15.97■□□□□ 0.15
C9orf78-205ENST00000480023 GOLGA6L19H0YKK7 550 aa15.97■□□□□ 0.15
C9orf78-205ENST00000480023 DTNBO60941 627 aa15.97■□□□□ 0.15
C9orf78-205ENST00000480023 RBM8AQ9Y5S9 174 aaKnown RBP15.97■□□□□ 0.15
C9orf78-205ENST00000480023 CTAGE5O15320 804 aa15.96■□□□□ 0.15
C9orf78-205ENST00000480023 BICD2Q8TD16 824 aa15.96■□□□□ 0.15
C9orf78-205ENST00000480023 IGSF1Q8N6C5 1336 aa15.96■□□□□ 0.15
C9orf78-205ENST00000480023 METP08581 1390 aa15.96■□□□□ 0.14
C9orf78-205ENST00000480023 CCDC69A6NI79 296 aa15.95■□□□□ 0.14
C9orf78-205ENST00000480023 BMS1Q14692 1282 aaKnown RBP15.95■□□□□ 0.14
C9orf78-205ENST00000480023 ARID5BQ14865 1188 aa15.95■□□□□ 0.14
C9orf78-205ENST00000480023 STX1AQ16623 288 aa15.95■□□□□ 0.14
C9orf78-205ENST00000480023 LARP1Q6PKG0 1096 aaKnown RBP15.95■□□□□ 0.14
C9orf78-205ENST00000480023 EVI5LQ96CN4 794 aa15.95■□□□□ 0.14
C9orf78-205ENST00000480023 ECHDC1Q9NTX5 307 aa15.95■□□□□ 0.14
C9orf78-205ENST00000480023 TFIP11Q9UBB9 837 aaKnown RBP15.95■□□□□ 0.14
C9orf78-205ENST00000480023 USP6P35125 1406 aa15.95■□□□□ 0.14
C9orf78-205ENST00000480023 ZBTB22O15209 634 aa15.95■□□□□ 0.14
C9orf78-205ENST00000480023 CYP2C19P33261 490 aa15.95■□□□□ 0.14
C9orf78-205ENST00000480023 MTX1Q13505 466 aa15.95■□□□□ 0.14
C9orf78-205ENST00000480023 CEP170BQ9Y4F5 1589 aaPredicted RBP15.95■□□□□ 0.14
C9orf78-205ENST00000480023 NPHP4O75161 1426 aaPredicted RBP15.94■□□□□ 0.14
C9orf78-205ENST00000480023 HIP1O00291 1037 aa15.94■□□□□ 0.14
C9orf78-205ENST00000480023 SLC27A2O14975 620 aa15.94■□□□□ 0.14
C9orf78-205ENST00000480023 GSDMDP57764 484 aa15.94■□□□□ 0.14
C9orf78-205ENST00000480023 RESTQ13127 1097 aa15.94■□□□□ 0.14
C9orf78-205ENST00000480023 C11orf57Q6ZUT1 292 aaPredicted RBP15.94■□□□□ 0.14
C9orf78-205ENST00000480023 SBNO1A3KN83 1393 aa15.94■□□□□ 0.14
C9orf78-205ENST00000480023 FLT4P35916 1363 aa15.94■□□□□ 0.14
C9orf78-205ENST00000480023 NPM1P06748 294 aaKnown RBP eCLIP15.94■□□□□ 0.14
C9orf78-205ENST00000480023 CDK11BP21127 795 aaKnown RBP15.94■□□□□ 0.14
C9orf78-205ENST00000480023 KCNJ6P48051 423 aa15.94■□□□□ 0.14
C9orf78-205ENST00000480023 DNAJC2Q99543 621 aaKnown RBP15.94■□□□□ 0.14
C9orf78-205ENST00000480023 OSBPL5Q9H0X9 879 aaPredicted RBP15.94■□□□□ 0.14
C9orf78-205ENST00000480023 NOL12Q9UGY1 213 aaKnown RBP eCLIP15.94■□□□□ 0.14
C9orf78-205ENST00000480023 V9GYY5 206 aaPredicted RBP15.94■□□□□ 0.14
C9orf78-205ENST00000480023 JCADQ9P266 1359 aa15.93■□□□□ 0.14
C9orf78-205ENST00000480023 TUBB4AP04350 444 aa15.93■□□□□ 0.14
C9orf78-205ENST00000480023 RPS6KB1P23443 525 aa15.93■□□□□ 0.14
C9orf78-205ENST00000480023 TOB2Q14106 344 aaPredicted RBP15.93■□□□□ 0.14
C9orf78-205ENST00000480023 TSGA10IPQ3SY00 556 aa15.93■□□□□ 0.14
C9orf78-205ENST00000480023 BLOC1S2Q6QNY1 142 aa15.93■□□□□ 0.14
C9orf78-205ENST00000480023 CLASRPQ8N2M8 674 aaKnown RBP15.93■□□□□ 0.14
C9orf78-205ENST00000480023 GPATCH3Q96I76 525 aa15.93■□□□□ 0.14
C9orf78-205ENST00000480023 NBPF7P0C2Y1 421 aaPredicted RBP15.92■□□□□ 0.14
C9orf78-205ENST00000480023 CCDC93Q567U6 631 aa15.92■□□□□ 0.14
C9orf78-205ENST00000480023 TXNDC2Q86VQ3 553 aa15.92■□□□□ 0.14
C9orf78-205ENST00000480023 NOL10Q9BSC4 688 aaKnown RBP15.92■□□□□ 0.14
C9orf78-205ENST00000480023 ZSCAN16Q9H4T2 348 aaPredicted RBP15.92■□□□□ 0.14
C9orf78-205ENST00000480023 CFAP45Q9UL16 551 aa15.92■□□□□ 0.14
C9orf78-205ENST00000480023 FHOD1Q9Y613 1164 aa15.92■□□□□ 0.14
C9orf78-205ENST00000480023 PLEKHG3A1L390 1219 aa15.92■□□□□ 0.14
C9orf78-205ENST00000480023 GNAT3A8MTJ3 354 aa15.92■□□□□ 0.14
C9orf78-205ENST00000480023 DHX40Q8IX18 779 aaKnown RBP15.92■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms