RNA–Protein interactions for RNA: ENST00000479501.5

COL20A1-206, Transcript of collagen type XX alpha 1 chain, humanhuman

TSL 1 (best)

Gene COL20A1, Length 4,536 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL20A1-206ENST00000479501 TFIP11Q9UBB9 837 aaKnown RBP16.79■□□□□ 0.28
COL20A1-206ENST00000479501 FAM135BQ49AJ0 1406 aa16.79■□□□□ 0.28
COL20A1-206ENST00000479501 CCT2P78371 535 aaKnown RBP16.78■□□□□ 0.28
COL20A1-206ENST00000479501 TCEANC2Q96MN5 208 aa16.78■□□□□ 0.28
COL20A1-206ENST00000479501 RBM27Q9P2N5 1060 aaKnown RBP16.78■□□□□ 0.28
COL20A1-206ENST00000479501 MAP3K4Q9Y6R4 1608 aa16.78■□□□□ 0.28
COL20A1-206ENST00000479501 NECAB1Q8N987 351 aa16.78■□□□□ 0.28
COL20A1-206ENST00000479501 CEP89Q96ST8 783 aa16.78■□□□□ 0.28
COL20A1-206ENST00000479501 GUCY1B3Q02153 619 aa16.78■□□□□ 0.28
COL20A1-206ENST00000479501 C8orf76Q96K31 380 aa16.78■□□□□ 0.28
COL20A1-206ENST00000479501 PNMA6EA0A0J9YXQ4 647 aa16.78■□□□□ 0.28
COL20A1-206ENST00000479501 ZGPATQ8N5A5 531 aaKnown RBP16.78■□□□□ 0.28
COL20A1-206ENST00000479501 ATP7BP35670 1465 aa16.77■□□□□ 0.28
COL20A1-206ENST00000479501 ZSCAN22P10073 491 aaPredicted RBP16.77■□□□□ 0.28
COL20A1-206ENST00000479501 ZNF790Q6PG37 636 aa16.77■□□□□ 0.28
COL20A1-206ENST00000479501 KIF24Q5T7B8 1368 aa16.77■□□□□ 0.27
COL20A1-206ENST00000479501 SLC5A1P13866 664 aa16.77■□□□□ 0.27
COL20A1-206ENST00000479501 KAT6BQ8WYB5 2073 aa16.77■□□□□ 0.27
COL20A1-206ENST00000479501 XRCC6P12956 609 aaKnown RBP eCLIP16.77■□□□□ 0.27
COL20A1-206ENST00000479501 IL15P40933 162 aaPredicted RBP16.77■□□□□ 0.27
COL20A1-206ENST00000479501 ARHGAP31Q2M1Z3 1444 aa16.77■□□□□ 0.27
COL20A1-206ENST00000479501 IL17REQ8NFR9 667 aa16.77■□□□□ 0.27
COL20A1-206ENST00000479501 WASF1Q92558 559 aa16.77■□□□□ 0.27
COL20A1-206ENST00000479501 TXLNAP40222 546 aa16.76■□□□□ 0.27
COL20A1-206ENST00000479501 UBE2HP62256 183 aa16.76■□□□□ 0.27
COL20A1-206ENST00000479501 ZSCAN23Q3MJ62 389 aa16.76■□□□□ 0.27
COL20A1-206ENST00000479501 PDCL2Q8N4E4 241 aa16.76■□□□□ 0.27
COL20A1-206ENST00000479501 BRF1Q92994 677 aa16.76■□□□□ 0.27
COL20A1-206ENST00000479501 BICC1Q9H694 974 aaKnown RBP16.76■□□□□ 0.27
COL20A1-206ENST00000479501 SERPINC1P01008 464 aa16.75■□□□□ 0.27
COL20A1-206ENST00000479501 NMIQ13287 307 aaPredicted RBP16.75■□□□□ 0.27
COL20A1-206ENST00000479501 RUFY1Q96T51 708 aa16.75■□□□□ 0.27
COL20A1-206ENST00000479501 MINDY4BA8MYZ0 360 aa16.75■□□□□ 0.27
COL20A1-206ENST00000479501 NBPF7P0C2Y1 421 aaPredicted RBP16.75■□□□□ 0.27
COL20A1-206ENST00000479501 HAND2P61296 217 aa16.75■□□□□ 0.27
COL20A1-206ENST00000479501 CAVIN4Q5BKX8 364 aa16.75■□□□□ 0.27
COL20A1-206ENST00000479501 ZMYND15Q9H091 742 aa16.75■□□□□ 0.27
COL20A1-206ENST00000479501 CLASP1Q7Z460 1538 aa16.75■□□□□ 0.27
COL20A1-206ENST00000479501 IL2RBP14784 551 aa16.75■□□□□ 0.27
COL20A1-206ENST00000479501 GOLGA8BA8MQT2 603 aa16.74■□□□□ 0.27
COL20A1-206ENST00000479501 PATL2C9JE40 543 aaKnown RBP16.74■□□□□ 0.27
COL20A1-206ENST00000479501 EIF4A1P60842 406 aaKnown RBP16.74■□□□□ 0.27
COL20A1-206ENST00000479501 MCMDC2Q4G0Z9 681 aa16.74■□□□□ 0.27
COL20A1-206ENST00000479501 AK7Q96M32 723 aa16.74■□□□□ 0.27
COL20A1-206ENST00000479501 FILIP1Q7Z7B0 1213 aa16.74■□□□□ 0.27
COL20A1-206ENST00000479501 PRR36Q9H6K5 1346 aa16.74■□□□□ 0.27
COL20A1-206ENST00000479501 BRPF1P55201 1214 aaPredicted RBP16.74■□□□□ 0.27
COL20A1-206ENST00000479501 TTF1Q15361 905 aaPredicted RBP16.74■□□□□ 0.27
COL20A1-206ENST00000479501 INTS4Q96HW7 963 aaKnown RBP16.74■□□□□ 0.27
COL20A1-206ENST00000479501 ROBO2Q9HCK4 1378 aa16.73■□□□□ 0.27
COL20A1-206ENST00000479501 HSPA2P54652 639 aa16.73■□□□□ 0.27
COL20A1-206ENST00000479501 CKAP2LQ8IYA6 745 aa16.73■□□□□ 0.27
COL20A1-206ENST00000479501 USP25Q9UHP3 1055 aa16.73■□□□□ 0.27
COL20A1-206ENST00000479501 NOL7Q9UMY1 257 aaKnown RBP16.73■□□□□ 0.27
COL20A1-206ENST00000479501 DDX19AQ9NUU7 478 aaKnown RBP16.73■□□□□ 0.27
COL20A1-206ENST00000479501 RNF17Q9BXT8 1623 aaKnown RBP16.73■□□□□ 0.27
COL20A1-206ENST00000479501 AK2P54819 239 aa16.73■□□□□ 0.27
COL20A1-206ENST00000479501 FILIP1LQ4L180 1135 aa16.73■□□□□ 0.27
COL20A1-206ENST00000479501 RTL1A6NKG5 1358 aa16.73■□□□□ 0.27
COL20A1-206ENST00000479501 PLEKHG1Q9ULL1 1385 aa16.73■□□□□ 0.27
COL20A1-206ENST00000479501 PRDM10Q9NQV6 1147 aa16.72■□□□□ 0.27
COL20A1-206ENST00000479501 USP16Q9Y5T5 823 aa16.72■□□□□ 0.27
COL20A1-206ENST00000479501 CCDC196A0A1B0GTZ2 297 aa16.72■□□□□ 0.27
COL20A1-206ENST00000479501 ZFYP08048 801 aaPredicted RBP16.72■□□□□ 0.27
COL20A1-206ENST00000479501 PANK2Q9BZ23 570 aa16.72■□□□□ 0.27
COL20A1-206ENST00000479501 H0YHG0 523 aa16.72■□□□□ 0.27
COL20A1-206ENST00000479501 ATP2B3Q16720 1220 aa16.72■□□□□ 0.27
COL20A1-206ENST00000479501 LRRC2Q9BYS8 371 aa16.72■□□□□ 0.27
COL20A1-206ENST00000479501 USP44Q9H0E7 712 aa16.72■□□□□ 0.27
COL20A1-206ENST00000479501 SPHKAPQ2M3C7 1700 aa16.71■□□□□ 0.27
COL20A1-206ENST00000479501 IFIT3O14879 490 aaKnown RBP16.71■□□□□ 0.27
COL20A1-206ENST00000479501 LRSAM1Q6UWE0 723 aa16.71■□□□□ 0.27
COL20A1-206ENST00000479501 PPFIA3O75145 1194 aa16.71■□□□□ 0.27
COL20A1-206ENST00000479501 ZPR1O75312 459 aa16.71■□□□□ 0.27
COL20A1-206ENST00000479501 ZNF853P0CG23 659 aa16.71■□□□□ 0.27
COL20A1-206ENST00000479501 CCDC82Q8N4S0 544 aa16.71■□□□□ 0.27
COL20A1-206ENST00000479501 DACH1Q9UI36 760 aa16.71■□□□□ 0.27
COL20A1-206ENST00000479501 CCP110O43303 1012 aa16.71■□□□□ 0.26
COL20A1-206ENST00000479501 TFCP2Q12800 502 aa16.71■□□□□ 0.26
COL20A1-206ENST00000479501 DHX8Q14562 1220 aaKnown RBP16.71■□□□□ 0.26
COL20A1-206ENST00000479501 CREB3L3Q68CJ9 461 aa16.71■□□□□ 0.26
COL20A1-206ENST00000479501 LEKR1Q6ZMV7 388 aa16.71■□□□□ 0.26
COL20A1-206ENST00000479501 USP48Q86UV5 1035 aa16.71■□□□□ 0.26
COL20A1-206ENST00000479501 ERCC4Q92889 916 aaPredicted RBP16.71■□□□□ 0.26
COL20A1-206ENST00000479501 ORC3Q9UBD5 711 aaPredicted RBP16.71■□□□□ 0.26
COL20A1-206ENST00000479501 SLC12A7Q9Y666 1083 aa16.71■□□□□ 0.26
COL20A1-206ENST00000479501 NCOA7Q8NI08 942 aa16.7■□□□□ 0.26
COL20A1-206ENST00000479501 CNPY2Q9Y2B0 182 aa16.7■□□□□ 0.26
COL20A1-206ENST00000479501 CBX1P83916 185 aa16.7■□□□□ 0.26
COL20A1-206ENST00000479501 ANO10Q9NW15 660 aa16.7■□□□□ 0.26
COL20A1-206ENST00000479501 AOX1Q06278 1338 aa16.7■□□□□ 0.26
COL20A1-206ENST00000479501 GSPT1P15170 499 aaKnown RBP16.7■□□□□ 0.26
COL20A1-206ENST00000479501 METTL22Q9BUU2 404 aaPredicted RBP16.7■□□□□ 0.26
COL20A1-206ENST00000479501 SAMD1Q6SPF0 538 aaPredicted RBP16.69■□□□□ 0.26
COL20A1-206ENST00000479501 PAG1Q9NWQ8 432 aa16.69■□□□□ 0.26
COL20A1-206ENST00000479501 CTAGE5O15320 804 aa16.69■□□□□ 0.26
COL20A1-206ENST00000479501 CLCN1P35523 988 aa16.69■□□□□ 0.26
COL20A1-206ENST00000479501 IKQ13123 557 aaPredicted RBP16.69■□□□□ 0.26
COL20A1-206ENST00000479501 RNF41Q9H4P4 317 aaPredicted RBP16.69■□□□□ 0.26
COL20A1-206ENST00000479501 MADDQ8WXG6 1647 aa16.69■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 16.5 ms