RNA–Protein interactions for RNA: ENST00000478776.1

VLDLR-204, Transcript of very low density lipoprotein receptor, humanhuman

TSL 3

Gene VLDLR, Length 510 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VLDLR-204ENST00000478776 TPSG1Q9NRR2 321 aa7.36□□□□□ -1.23
VLDLR-204ENST00000478776 NID1P14543 1247 aa7.35□□□□□ -1.23
VLDLR-204ENST00000478776 RAC1P63000 192 aa7.35□□□□□ -1.23
VLDLR-204ENST00000478776 COL9A3Q14050 684 aaPredicted RBP7.35□□□□□ -1.23
VLDLR-204ENST00000478776 BTLAQ7Z6A9 289 aa7.35□□□□□ -1.23
VLDLR-204ENST00000478776 SCG3Q8WXD2 468 aaKnown RBP7.35□□□□□ -1.23
VLDLR-204ENST00000478776 UCN2Q96RP3 112 aa7.35□□□□□ -1.23
VLDLR-204ENST00000478776 HINFPQ9BQA5 517 aa7.35□□□□□ -1.23
VLDLR-204ENST00000478776 EFCC1Q9HA90 598 aa7.35□□□□□ -1.23
VLDLR-204ENST00000478776 ITGB7P26010 798 aa7.34□□□□□ -1.23
VLDLR-204ENST00000478776 SEC13P55735 322 aa7.34□□□□□ -1.23
VLDLR-204ENST00000478776 NKAPLQ5M9Q1 402 aa7.34□□□□□ -1.23
VLDLR-204ENST00000478776 C20orf204Q6ZNR8 217 aa7.34□□□□□ -1.23
VLDLR-204ENST00000478776 JPH1Q9HDC5 661 aaPredicted RBP7.34□□□□□ -1.23
VLDLR-204ENST00000478776 LARP1Q6PKG0 1096 aaKnown RBP7.33□□□□□ -1.24
VLDLR-204ENST00000478776 POTEAQ6S8J7 498 aa7.33□□□□□ -1.24
VLDLR-204ENST00000478776 STAG2Q8N3U4 1231 aa7.33□□□□□ -1.24
VLDLR-204ENST00000478776 NUDT8Q8WV74 236 aa7.33□□□□□ -1.24
VLDLR-204ENST00000478776 SLC6A14Q9UN76 642 aa7.33□□□□□ -1.24
VLDLR-204ENST00000478776 DYRK3O43781 588 aa7.32□□□□□ -1.24
VLDLR-204ENST00000478776 C21orf2O43822 256 aa7.32□□□□□ -1.24
VLDLR-204ENST00000478776 ELNP15502 786 aa7.32□□□□□ -1.24
VLDLR-204ENST00000478776 NRG1Q02297 640 aaPredicted RBP7.32□□□□□ -1.24
VLDLR-204ENST00000478776 C2orf49Q9BVC5 232 aaPredicted RBP7.32□□□□□ -1.24
VLDLR-204ENST00000478776 A0A0A0MRY4 1105 aa7.31□□□□□ -1.24
VLDLR-204ENST00000478776 RGS9O75916 674 aaPredicted RBP7.31□□□□□ -1.24
VLDLR-204ENST00000478776 EPB42P16452 691 aa7.31□□□□□ -1.24
VLDLR-204ENST00000478776 CCINQ13939 588 aa7.31□□□□□ -1.24
VLDLR-204ENST00000478776 PSAPL1Q6NUJ1 521 aa7.31□□□□□ -1.24
VLDLR-204ENST00000478776 DNAJB12Q9NXW2 375 aaKnown RBP7.31□□□□□ -1.24
VLDLR-204ENST00000478776 TFIP11Q9UBB9 837 aaKnown RBP7.31□□□□□ -1.24
VLDLR-204ENST00000478776 GTF3C5Q9Y5Q8 519 aaPredicted RBP7.31□□□□□ -1.24
VLDLR-204ENST00000478776 PCSK7Q16549 785 aa7.3□□□□□ -1.24
VLDLR-204ENST00000478776 RTN1Q16799 776 aa7.3□□□□□ -1.24
VLDLR-204ENST00000478776 USP21Q9UK80 565 aa7.3□□□□□ -1.24
VLDLR-204ENST00000478776 NFKB1P19838 968 aa7.29□□□□□ -1.24
VLDLR-204ENST00000478776 PRSS36Q5K4E3 855 aa7.29□□□□□ -1.24
VLDLR-204ENST00000478776 IER5Q5VY09 327 aa7.29□□□□□ -1.24
VLDLR-204ENST00000478776 LENG1Q96BZ8 264 aaPredicted RBP7.29□□□□□ -1.24
VLDLR-204ENST00000478776 GSX2Q9BZM3 304 aa7.29□□□□□ -1.24
VLDLR-204ENST00000478776 TGFBR3LH3BV60 316 aa7.28□□□□□ -1.24
VLDLR-204ENST00000478776 SELPP16109 830 aa7.28□□□□□ -1.24
VLDLR-204ENST00000478776 ADGRE1Q14246 886 aa7.28□□□□□ -1.24
VLDLR-204ENST00000478776 MBTPS1Q14703 1052 aa7.28□□□□□ -1.24
VLDLR-204ENST00000478776 NBPF11Q86T75 865 aa7.28□□□□□ -1.24
VLDLR-204ENST00000478776 TXNRD3Q86VQ6 643 aa7.28□□□□□ -1.24
VLDLR-204ENST00000478776 DMRTC2Q8IXT2 367 aaPredicted RBP7.28□□□□□ -1.24
VLDLR-204ENST00000478776 GLMNQ92990 594 aa7.28□□□□□ -1.24
VLDLR-204ENST00000478776 MAFBQ9Y5Q3 323 aaPredicted RBP7.28□□□□□ -1.24
VLDLR-204ENST00000478776 DKK1O94907 266 aa7.27□□□□□ -1.25
VLDLR-204ENST00000478776 H2AFB1P0C5Y9 115 aa7.27□□□□□ -1.25
VLDLR-204ENST00000478776 H2AFB2P0C5Z0 115 aa7.27□□□□□ -1.25
VLDLR-204ENST00000478776 AFF1P51825 1210 aaKnown RBP7.27□□□□□ -1.25
VLDLR-204ENST00000478776 FAM35AQ86V20 835 aa7.27□□□□□ -1.25
VLDLR-204ENST00000478776 VTI1AQ96AJ9 217 aa7.27□□□□□ -1.25
VLDLR-204ENST00000478776 PSMG3-AS1Q96PY0 264 aa7.27□□□□□ -1.25
VLDLR-204ENST00000478776 ZFP64Q9NPA5 681 aa7.27□□□□□ -1.25
VLDLR-204ENST00000478776 LGR5O75473 907 aa7.26□□□□□ -1.25
VLDLR-204ENST00000478776 CPB1P15086 417 aa7.26□□□□□ -1.25
VLDLR-204ENST00000478776 IGFBP4P22692 258 aa7.26□□□□□ -1.25
VLDLR-204ENST00000478776 ARID4AP29374 1257 aaPredicted RBP7.26□□□□□ -1.25
VLDLR-204ENST00000478776 DPYDQ12882 1025 aa7.26□□□□□ -1.25
VLDLR-204ENST00000478776 SHISA2Q6UWI4 295 aa7.26□□□□□ -1.25
VLDLR-204ENST00000478776 PROSER2Q86WR7 435 aaPredicted RBP7.26□□□□□ -1.25
VLDLR-204ENST00000478776 TP53INP1Q96A56 240 aa7.26□□□□□ -1.25
VLDLR-204ENST00000478776 CALR3Q96L12 384 aaKnown RBP7.26□□□□□ -1.25
VLDLR-204ENST00000478776 ARTNQ5T4W7 220 aa7.25□□□□□ -1.25
VLDLR-204ENST00000478776 ELMSAN1Q6PJG2 1045 aa7.25□□□□□ -1.25
VLDLR-204ENST00000478776 KRT25Q7Z3Z0 450 aa7.25□□□□□ -1.25
VLDLR-204ENST00000478776 FMR1NBQ8N0W7 255 aaPredicted RBP7.25□□□□□ -1.25
VLDLR-204ENST00000478776 CLUAP1Q96AJ1 413 aa7.25□□□□□ -1.25
VLDLR-204ENST00000478776 IDH3AP50213 366 aa7.24□□□□□ -1.25
VLDLR-204ENST00000478776 MSL1Q68DK7 614 aa7.24□□□□□ -1.25
VLDLR-204ENST00000478776 VRTNQ9H8Y1 702 aa7.24□□□□□ -1.25
VLDLR-204ENST00000478776 KLK14Q9P0G3 267 aa7.24□□□□□ -1.25
VLDLR-204ENST00000478776 MAP3K6O95382 1288 aa7.23□□□□□ -1.25
VLDLR-204ENST00000478776 ARSDP51689 593 aa7.23□□□□□ -1.25
VLDLR-204ENST00000478776 PTK7Q13308 1070 aa7.23□□□□□ -1.25
VLDLR-204ENST00000478776 FOXD4L6Q3SYB3 417 aaPredicted RBP7.23□□□□□ -1.25
VLDLR-204ENST00000478776 CRTC2Q53ET0 693 aaPredicted RBP7.23□□□□□ -1.25
VLDLR-204ENST00000478776 FOXD4L3Q6VB84 417 aaPredicted RBP7.23□□□□□ -1.25
VLDLR-204ENST00000478776 WFDC8Q8IUA0 241 aa7.23□□□□□ -1.25
VLDLR-204ENST00000478776 ANKMY2Q8IV38 441 aa7.23□□□□□ -1.25
VLDLR-204ENST00000478776 DTWD1Q8N5C7 304 aa7.23□□□□□ -1.25
VLDLR-204ENST00000478776 PPP1R12CQ9BZL4 782 aa7.23□□□□□ -1.25
VLDLR-204ENST00000478776 UTP3Q9NQZ2 479 aaKnown RBP eCLIP7.23□□□□□ -1.25
VLDLR-204ENST00000478776 NAGPAQ9UK23 515 aa7.23□□□□□ -1.25
VLDLR-204ENST00000478776 BCS1LQ9Y276 419 aa7.23□□□□□ -1.25
VLDLR-204ENST00000478776 RARAP10276 462 aa7.22□□□□□ -1.25
VLDLR-204ENST00000478776 LMOD1P29536 600 aaPredicted RBP7.22□□□□□ -1.25
VLDLR-204ENST00000478776 DGKZQ13574 1117 aa7.22□□□□□ -1.25
VLDLR-204ENST00000478776 DHX32Q7L7V1 743 aaKnown RBP7.22□□□□□ -1.25
VLDLR-204ENST00000478776 KRTAP4-8Q9BYQ9 185 aa7.22□□□□□ -1.25
VLDLR-204ENST00000478776 FRRS1LQ9P0K9 344 aa7.22□□□□□ -1.25
VLDLR-204ENST00000478776 DMGDHQ9UI17 866 aaKnown RBP7.22□□□□□ -1.25
VLDLR-204ENST00000478776 FAM196BA6NMK8 535 aa7.21□□□□□ -1.26
VLDLR-204ENST00000478776 USP17L15C9J2P7 530 aa7.21□□□□□ -1.26
VLDLR-204ENST00000478776 USP17L10C9JJH3 530 aa7.21□□□□□ -1.26
VLDLR-204ENST00000478776 USP17L13C9JLJ4 530 aa7.21□□□□□ -1.26
VLDLR-204ENST00000478776 USP17L12C9JPN9 530 aa7.21□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 14.9 ms