RNA–Protein interactions for RNA: ENST00000478693.1

SRRT-211, Transcript of serrate, RNA effector molecule, humanhuman

TSL 2

Gene SRRT, Length 655 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRRT-211ENST00000478693 RNF123Q5XPI4 1314 aa14.45□□□□□ -0.1
SRRT-211ENST00000478693 SH3TC1Q8TE82 1336 aa14.45□□□□□ -0.1
SRRT-211ENST00000478693 PXDNLA1KZ92 1463 aa14.45□□□□□ -0.1
SRRT-211ENST00000478693 DCAF8L1A6NGE4 600 aa14.45□□□□□ -0.1
SRRT-211ENST00000478693 PDE6BP35913 854 aa14.45□□□□□ -0.1
SRRT-211ENST00000478693 TGFB2P61812 414 aa14.45□□□□□ -0.1
SRRT-211ENST00000478693 BRIP1Q9BX63 1249 aa14.45□□□□□ -0.1
SRRT-211ENST00000478693 CHRNA5P30532 468 aa14.44□□□□□ -0.1
SRRT-211ENST00000478693 CWF19L2Q2TBE0 894 aaKnown RBP14.44□□□□□ -0.1
SRRT-211ENST00000478693 RTL5Q5HYW3 569 aaPredicted RBP14.44□□□□□ -0.1
SRRT-211ENST00000478693 C2CD5Q86YS7 1000 aa14.44□□□□□ -0.1
SRRT-211ENST00000478693 CCDC191Q8NCU4 936 aa14.44□□□□□ -0.1
SRRT-211ENST00000478693 API5Q9BZZ5 524 aaKnown RBP14.44□□□□□ -0.1
SRRT-211ENST00000478693 NOB1Q9ULX3 412 aaKnown RBP14.44□□□□□ -0.1
SRRT-211ENST00000478693 A0A0G2JLW4 131 aa14.43□□□□□ -0.1
SRRT-211ENST00000478693 NEURL1BA8MQ27 555 aa14.43□□□□□ -0.1
SRRT-211ENST00000478693 H0YIN7 160 aa14.43□□□□□ -0.1
SRRT-211ENST00000478693 BCAR3O75815 825 aa14.43□□□□□ -0.1
SRRT-211ENST00000478693 DPEP1P16444 411 aa14.43□□□□□ -0.1
SRRT-211ENST00000478693 LINS1Q8NG48 757 aa14.43□□□□□ -0.1
SRRT-211ENST00000478693 KIF13BQ9NQT8 1826 aa14.43□□□□□ -0.1
SRRT-211ENST00000478693 IPO8O15397 1037 aaKnown RBP14.42□□□□□ -0.1
SRRT-211ENST00000478693 IGKV5-2P06315 115 aa14.42□□□□□ -0.1
SRRT-211ENST00000478693 TRIM28Q13263 835 aaKnown RBP14.42□□□□□ -0.1
SRRT-211ENST00000478693 ZBTB38Q8NAP3 1195 aaPredicted RBP14.42□□□□□ -0.1
SRRT-211ENST00000478693 ZNF622Q969S3 477 aaKnown RBP eCLIP14.42□□□□□ -0.18e-10■■■□□ 17.4
SRRT-211ENST00000478693 FAM89AQ96GI7 184 aa14.42□□□□□ -0.1
SRRT-211ENST00000478693 SRCIN1Q9C0H9 1055 aa14.42□□□□□ -0.1
SRRT-211ENST00000478693 PDZRN3Q9UPQ7 1066 aa14.42□□□□□ -0.1
SRRT-211ENST00000478693 HCLS1P14317 486 aaPredicted RBP14.41□□□□□ -0.1
SRRT-211ENST00000478693 HSP90B1P14625 803 aaKnown RBP14.41□□□□□ -0.1
SRRT-211ENST00000478693 BRPF1P55201 1214 aaPredicted RBP14.41□□□□□ -0.1
SRRT-211ENST00000478693 GPR162Q16538 588 aa14.41□□□□□ -0.1
SRRT-211ENST00000478693 RPGRQ92834 1020 aaKnown RBP14.41□□□□□ -0.1
SRRT-211ENST00000478693 NLRP3Q96P20 1036 aa14.41□□□□□ -0.1
SRRT-211ENST00000478693 TNRC6CQ9HCJ0 1690 aaKnown RBP14.41□□□□□ -0.1
SRRT-211ENST00000478693 CACNA1FO60840 1977 aa14.41□□□□□ -0.1
SRRT-211ENST00000478693 RIC1Q4ADV7 1423 aa14.41□□□□□ -0.1
SRRT-211ENST00000478693 N4BP2Q86UW6 1770 aaPredicted RBP14.4□□□□□ -0.1
SRRT-211ENST00000478693 IRS4O14654 1257 aaPredicted RBP14.4□□□□□ -0.1
SRRT-211ENST00000478693 PCCAP05165 728 aaPredicted RBP14.4□□□□□ -0.1
SRRT-211ENST00000478693 GCKRQ14397 625 aa14.4□□□□□ -0.1
SRRT-211ENST00000478693 BEND3Q5T5X7 828 aa14.4□□□□□ -0.1
SRRT-211ENST00000478693 JARID2Q92833 1246 aaPredicted RBP14.4□□□□□ -0.1
SRRT-211ENST00000478693 PIM2Q9P1W9 311 aa14.4□□□□□ -0.1
SRRT-211ENST00000478693 RCAN3Q9UKA8 241 aa14.4□□□□□ -0.1
SRRT-211ENST00000478693 BCS1LQ9Y276 419 aa14.4□□□□□ -0.1
SRRT-211ENST00000478693 ALDH1L1O75891 902 aa14.39□□□□□ -0.11
SRRT-211ENST00000478693 ZKSCAN2Q63HK3 967 aa14.39□□□□□ -0.11
SRRT-211ENST00000478693 UBE3BQ7Z3V4 1068 aa14.39□□□□□ -0.11
SRRT-211ENST00000478693 FTSJ3Q8IY81 847 aaKnown RBP14.39□□□□□ -0.11
SRRT-211ENST00000478693 SYNE4Q8N205 404 aa14.39□□□□□ -0.11
SRRT-211ENST00000478693 MASTLQ96GX5 879 aa14.39□□□□□ -0.11
SRRT-211ENST00000478693 C9orf78Q9NZ63 289 aaPredicted RBP14.39□□□□□ -0.11
SRRT-211ENST00000478693 ANKRD31Q8N7Z5 1873 aa14.39□□□□□ -0.11
SRRT-211ENST00000478693 COL11A2P13942 1736 aaPredicted RBP14.38□□□□□ -0.11
SRRT-211ENST00000478693 KIAA1551Q9HCM1 1747 aa14.38□□□□□ -0.11
SRRT-211ENST00000478693 NPR1P16066 1061 aa14.38□□□□□ -0.11
SRRT-211ENST00000478693 CCT4P50991 539 aaKnown RBP14.38□□□□□ -0.11
SRRT-211ENST00000478693 DALRD3Q5D0E6 543 aaKnown RBP14.38□□□□□ -0.11
SRRT-211ENST00000478693 ATF7IPQ6VMQ6 1270 aa14.38□□□□□ -0.11
SRRT-211ENST00000478693 ARHGAP45Q92619 1136 aa14.38□□□□□ -0.11
SRRT-211ENST00000478693 CLUAP1Q96AJ1 413 aa14.38□□□□□ -0.11
SRRT-211ENST00000478693 SRGNP10124 158 aa14.37□□□□□ -0.11
SRRT-211ENST00000478693 TRIM27P14373 513 aa14.37□□□□□ -0.11
SRRT-211ENST00000478693 STYK1Q6J9G0 422 aa14.37□□□□□ -0.11
SRRT-211ENST00000478693 TTLL6Q8N841 843 aa14.37□□□□□ -0.11
SRRT-211ENST00000478693 CNKSR1Q969H4 720 aa14.37□□□□□ -0.11
SRRT-211ENST00000478693 RBM17Q96I25 401 aaKnown RBP14.37□□□□□ -0.11
SRRT-211ENST00000478693 CDHR2Q9BYE9 1310 aa14.37□□□□□ -0.11
SRRT-211ENST00000478693 GRM8O00222 908 aa14.36□□□□□ -0.11
SRRT-211ENST00000478693 PDE8AO60658 829 aa14.36□□□□□ -0.11
SRRT-211ENST00000478693 SLC10A5Q5PT55 438 aa14.36□□□□□ -0.11
SRRT-211ENST00000478693 C3orf67Q6ZVT6 689 aa14.36□□□□□ -0.11
SRRT-211ENST00000478693 GOLGA6L2Q8N9W4 650 aaPredicted RBP14.36□□□□□ -0.11
SRRT-211ENST00000478693 ZNF219Q9P2Y4 722 aaPredicted RBP14.36□□□□□ -0.11
SRRT-211ENST00000478693 LAMB2P55268 1798 aa14.36□□□□□ -0.11
SRRT-211ENST00000478693 DLEC1Q9Y238 1755 aa14.35□□□□□ -0.11
SRRT-211ENST00000478693 KCNA3P22001 575 aa14.35□□□□□ -0.11
SRRT-211ENST00000478693 DDX46Q7L014 1031 aaKnown RBP14.35□□□□□ -0.11
SRRT-211ENST00000478693 CCDC85AQ96PX6 553 aaPredicted RBP14.35□□□□□ -0.11
SRRT-211ENST00000478693 ABCC4O15439 1325 aa14.35□□□□□ -0.11
SRRT-211ENST00000478693 DDX60Q8IY21 1712 aaKnown RBP14.35□□□□□ -0.11
SRRT-211ENST00000478693 KLRG2A4D1S0 409 aaPredicted RBP14.34□□□□□ -0.11
SRRT-211ENST00000478693 H7C1W4 665 aa14.34□□□□□ -0.11
SRRT-211ENST00000478693 YBX3P16989 372 aaKnown RBP eCLIP14.34□□□□□ -0.119e-6■■■□□ 18.6
SRRT-211ENST00000478693 ALDH1B1P30837 517 aa14.34□□□□□ -0.11
SRRT-211ENST00000478693 CTSWP56202 376 aa14.34□□□□□ -0.11
SRRT-211ENST00000478693 CRY2Q49AN0 593 aa14.34□□□□□ -0.11
SRRT-211ENST00000478693 CCDC152Q4G0S7 254 aa14.34□□□□□ -0.11
SRRT-211ENST00000478693 PRPF40BQ6NWY9 871 aaKnown RBP14.34□□□□□ -0.11
SRRT-211ENST00000478693 DZIP1LQ8IYY4 767 aaKnown RBP14.34□□□□□ -0.11
SRRT-211ENST00000478693 TNNQ9UQP3 1299 aa14.34□□□□□ -0.11
SRRT-211ENST00000478693 CHMP3Q9Y3E7 222 aa14.34□□□□□ -0.11
SRRT-211ENST00000478693 GRIN3BO60391 1043 aa14.33□□□□□ -0.12
SRRT-211ENST00000478693 TMX4Q9H1E5 349 aaPredicted RBP14.33□□□□□ -0.12
SRRT-211ENST00000478693 PPEF1O14829 653 aaPredicted RBP14.32□□□□□ -0.12
SRRT-211ENST00000478693 C21orf2O43822 256 aa14.32□□□□□ -0.12
SRRT-211ENST00000478693 UBTFL1P0CB47 393 aaPredicted RBP14.32□□□□□ -0.12
SRRT-211ENST00000478693 MS4A1P11836 297 aa14.32□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 55.3 ms