RNA–Protein interactions for RNA: ENST00000478616.1

SREBF1-212, Transcript of sterol regulatory element binding transcription factor 1, humanhuman

TSL 5

Gene SREBF1, Length 882 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREBF1-212ENST00000478616 NPHP1O15259 732 aa24.37■■□□□ 1.49
SREBF1-212ENST00000478616 NPR1P16066 1061 aa24.37■■□□□ 1.49
SREBF1-212ENST00000478616 TCIRG1Q13488 830 aa24.37■■□□□ 1.49
SREBF1-212ENST00000478616 CNKSR1Q969H4 720 aa24.37■■□□□ 1.49
SREBF1-212ENST00000478616 NYXQ9GZU5 481 aa24.37■■□□□ 1.49
SREBF1-212ENST00000478616 RNF181Q9P0P0 153 aa24.37■■□□□ 1.49
SREBF1-212ENST00000478616 COL4A1P02462 1669 aa24.37■■□□□ 1.49
SREBF1-212ENST00000478616 IL16Q14005 1332 aa24.36■■□□□ 1.49
SREBF1-212ENST00000478616 FAM9BQ8IZU0 186 aa24.36■■□□□ 1.49
SREBF1-212ENST00000478616 ISCA1Q9BUE6 129 aa24.36■■□□□ 1.49
SREBF1-212ENST00000478616 C1QTNF8P60827 252 aa24.35■■□□□ 1.49
SREBF1-212ENST00000478616 PARP10Q53GL7 1025 aa24.35■■□□□ 1.49
SREBF1-212ENST00000478616 SLC10A5Q5PT55 438 aa24.35■■□□□ 1.49
SREBF1-212ENST00000478616 PLBD2Q8NHP8 589 aa24.35■■□□□ 1.49
SREBF1-212ENST00000478616 ZNF428Q96B54 188 aa24.35■■□□□ 1.49
SREBF1-212ENST00000478616 GPBP1L1Q9HC44 474 aaPredicted RBP24.35■■□□□ 1.49
SREBF1-212ENST00000478616 SALL2Q9Y467 1007 aaPredicted RBP24.35■■□□□ 1.49
SREBF1-212ENST00000478616 HOXA10P31260 410 aaPredicted RBP24.34■■□□□ 1.49
SREBF1-212ENST00000478616 HYPKQ9NX55 129 aa24.34■■□□□ 1.49
SREBF1-212ENST00000478616 ANKRD13DQ6ZTN6 518 aa24.33■■□□□ 1.49
SREBF1-212ENST00000478616 LTBP3Q9NS15 1303 aa24.33■■□□□ 1.48
SREBF1-212ENST00000478616 FANCIQ9NVI1 1328 aa24.33■■□□□ 1.48
SREBF1-212ENST00000478616 LMNB1P20700 586 aa24.32■■□□□ 1.48
SREBF1-212ENST00000478616 UTP14AQ9BVJ6 771 aaKnown RBP24.32■■□□□ 1.48
SREBF1-212ENST00000478616 NMRK2Q9NPI5 230 aa24.32■■□□□ 1.48
SREBF1-212ENST00000478616 ZNF521Q96K83 1311 aa24.32■■□□□ 1.48
SREBF1-212ENST00000478616 GTF2E1P29083 439 aaPredicted RBP24.31■■□□□ 1.48
SREBF1-212ENST00000478616 PPP1R42Q7Z4L9 355 aa24.31■■□□□ 1.48
SREBF1-212ENST00000478616 ATP5J2-PTCD1G3V325 749 aa24.3■■□□□ 1.48
SREBF1-212ENST00000478616 TCERG1O14776 1098 aaKnown RBP24.3■■□□□ 1.48
SREBF1-212ENST00000478616 HSP90AB3PQ58FF7 597 aa24.3■■□□□ 1.48
SREBF1-212ENST00000478616 WDR63Q8IWG1 891 aa24.3■■□□□ 1.48
SREBF1-212ENST00000478616 CACNA1FO60840 1977 aa24.3■■□□□ 1.48
SREBF1-212ENST00000478616 COL4A5P29400 1685 aa24.3■■□□□ 1.48
SREBF1-212ENST00000478616 G2E3Q7L622 706 aa24.29■■□□□ 1.48
SREBF1-212ENST00000478616 HCLS1P14317 486 aaPredicted RBP24.28■■□□□ 1.48
SREBF1-212ENST00000478616 TRIM28Q13263 835 aaKnown RBP24.27■■□□□ 1.48
SREBF1-212ENST00000478616 TWISTNBQ3B726 338 aaPredicted RBP24.27■■□□□ 1.48
SREBF1-212ENST00000478616 RNF123Q5XPI4 1314 aa24.27■■□□□ 1.48
SREBF1-212ENST00000478616 CRAMP1Q96RY5 1269 aa24.26■■□□□ 1.47
SREBF1-212ENST00000478616 TAOK3Q9H2K8 898 aa24.26■■□□□ 1.47
SREBF1-212ENST00000478616 WDR90Q96KV7 1748 aa24.25■■□□□ 1.47
SREBF1-212ENST00000478616 VAMP4O75379 141 aa24.25■■□□□ 1.47
SREBF1-212ENST00000478616 ALDH1B1P30837 517 aa24.25■■□□□ 1.47
SREBF1-212ENST00000478616 CCDC93Q567U6 631 aa24.25■■□□□ 1.47
SREBF1-212ENST00000478616 CCDC30Q5VVM6 783 aa24.25■■□□□ 1.47
SREBF1-212ENST00000478616 TRMT112Q9UI30 125 aaKnown RBP24.25■■□□□ 1.47
SREBF1-212ENST00000478616 ZC3H4Q9UPT8 1303 aaKnown RBP24.25■■□□□ 1.47
SREBF1-212ENST00000478616 LRRC37AA6NMS7 1700 aa24.24■■□□□ 1.47
SREBF1-212ENST00000478616 EXOSC9Q06265 439 aaKnown RBP24.24■■□□□ 1.47
SREBF1-212ENST00000478616 ABCC4O15439 1325 aa24.24■■□□□ 1.47
SREBF1-212ENST00000478616 SH3TC1Q8TE82 1336 aa24.24■■□□□ 1.47
SREBF1-212ENST00000478616 POTECB2RU33 542 aa24.23■■□□□ 1.47
SREBF1-212ENST00000478616 FAM89AQ96GI7 184 aa24.23■■□□□ 1.47
SREBF1-212ENST00000478616 NLRP3Q96P20 1036 aa24.23■■□□□ 1.47
SREBF1-212ENST00000478616 SOGA3Q5TF21 947 aa24.22■■□□□ 1.47
SREBF1-212ENST00000478616 RPGRQ92834 1020 aaKnown RBP24.22■■□□□ 1.47
SREBF1-212ENST00000478616 GLTPD2A6NH11 291 aa24.21■■□□□ 1.47
SREBF1-212ENST00000478616 FKBP4Q02790 459 aaKnown RBP eCLIP24.21■■□□□ 1.47
SREBF1-212ENST00000478616 RIC3Q7Z5B4 369 aa24.21■■□□□ 1.47
SREBF1-212ENST00000478616 MYD88Q99836 296 aa24.21■■□□□ 1.47
SREBF1-212ENST00000478616 ZNF277Q9NRM2 450 aaPredicted RBP24.21■■□□□ 1.47
SREBF1-212ENST00000478616 DUOX1Q9NRD9 1551 aa24.2■■□□□ 1.47
SREBF1-212ENST00000478616 IGKV5-2P06315 115 aa24.2■■□□□ 1.46
SREBF1-212ENST00000478616 RBM17Q96I25 401 aaKnown RBP24.2■■□□□ 1.46
SREBF1-212ENST00000478616 METTL22Q9BUU2 404 aaPredicted RBP24.2■■□□□ 1.46
SREBF1-212ENST00000478616 RRAGCQ9HB90 399 aa24.2■■□□□ 1.46
SREBF1-212ENST00000478616 LTBP1Q14766 1721 aa24.2■■□□□ 1.46
SREBF1-212ENST00000478616 GOLGA2Q08379 1002 aa24.19■■□□□ 1.46
SREBF1-212ENST00000478616 RTL5Q5HYW3 569 aaPredicted RBP24.19■■□□□ 1.46
SREBF1-212ENST00000478616 MAP3K2Q9Y2U5 619 aa24.19■■□□□ 1.46
SREBF1-212ENST00000478616 PI4KAP2A4QPH2 592 aa24.18■■□□□ 1.46
SREBF1-212ENST00000478616 PPEF1O14829 653 aaPredicted RBP24.18■■□□□ 1.46
SREBF1-212ENST00000478616 KSR2Q6VAB6 950 aa24.18■■□□□ 1.46
SREBF1-212ENST00000478616 PI4KAP1Q8N8J0 262 aa24.18■■□□□ 1.46
SREBF1-212ENST00000478616 JARID2Q92833 1246 aaPredicted RBP24.18■■□□□ 1.46
SREBF1-212ENST00000478616 SLC4A2P04920 1241 aa24.17■■□□□ 1.46
SREBF1-212ENST00000478616 SF3B3Q15393 1217 aaKnown RBP24.17■■□□□ 1.46
SREBF1-212ENST00000478616 RTKN2Q8IZC4 609 aa24.17■■□□□ 1.46
SREBF1-212ENST00000478616 MYH3P11055 1940 aa24.17■■□□□ 1.46
SREBF1-212ENST00000478616 KDM2BQ8NHM5 1336 aa24.16■■□□□ 1.46
SREBF1-212ENST00000478616 PSMD1Q99460 953 aa24.16■■□□□ 1.46
SREBF1-212ENST00000478616 ZNF541Q9H0D2 1346 aa24.15■■□□□ 1.46
SREBF1-212ENST00000478616 CCER2I3L3R5 266 aa24.15■■□□□ 1.46
SREBF1-212ENST00000478616 ZBTB38Q8NAP3 1195 aaPredicted RBP24.15■■□□□ 1.46
SREBF1-212ENST00000478616 ATP6V0A2Q9Y487 856 aa24.15■■□□□ 1.46
SREBF1-212ENST00000478616 IRS4O14654 1257 aaPredicted RBP24.14■■□□□ 1.45
SREBF1-212ENST00000478616 CCDC191Q8NCU4 936 aa24.14■■□□□ 1.45
SREBF1-212ENST00000478616 CELF1Q92879 486 aaKnown RBP24.14■■□□□ 1.45
SREBF1-212ENST00000478616 TOMM70O94826 608 aa24.13■■□□□ 1.45
SREBF1-212ENST00000478616 PCCAP05165 728 aaPredicted RBP24.13■■□□□ 1.45
SREBF1-212ENST00000478616 IARSP41252 1262 aaKnown RBP24.13■■□□□ 1.45
SREBF1-212ENST00000478616 FLIIQ13045 1269 aa24.13■■□□□ 1.45
SREBF1-212ENST00000478616 CWF19L2Q2TBE0 894 aaKnown RBP24.13■■□□□ 1.45
SREBF1-212ENST00000478616 CC2D2BQ6DHV5 1058 aa24.13■■□□□ 1.45
SREBF1-212ENST00000478616 STK31Q9BXU1 1019 aa24.13■■□□□ 1.45
SREBF1-212ENST00000478616 DDNO94850 711 aaPredicted RBP24.12■■□□□ 1.45
SREBF1-212ENST00000478616 GRAPQ13588 217 aa24.12■■□□□ 1.45
SREBF1-212ENST00000478616 GRAPLQ8TC17 118 aaPredicted RBP24.12■■□□□ 1.45
SREBF1-212ENST00000478616 CEP350Q5VT06 3117 aa24.11■■□□□ 1.45
Retrieved 100 of 20,778 RNA–protein pairs in 63.3 ms