RNA–Protein interactions for RNA: ENST00000478573.6

CDC42BPA-212, Transcript of CDC42 binding protein kinase alpha, humanhuman

TSL 5

Gene CDC42BPA, Length 599 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPA-212ENST00000478573 USP17L12C9JPN9 530 aa8.2□□□□□ -1.1
CDC42BPA-212ENST00000478573 USP17L11C9JVI0 530 aa8.2□□□□□ -1.1
CDC42BPA-212ENST00000478573 USP17L21D6R901 530 aa8.2□□□□□ -1.1
CDC42BPA-212ENST00000478573 USP17L18D6R9N7 530 aa8.2□□□□□ -1.1
CDC42BPA-212ENST00000478573 USP17L22D6RA61 530 aa8.2□□□□□ -1.1
CDC42BPA-212ENST00000478573 USP17L17D6RBQ6 530 aa8.2□□□□□ -1.1
CDC42BPA-212ENST00000478573 USP17L19D6RCP7 530 aa8.2□□□□□ -1.1
CDC42BPA-212ENST00000478573 USP17L20D6RJB6 530 aa8.2□□□□□ -1.1
CDC42BPA-212ENST00000478573 ALBP02768 609 aa8.2□□□□□ -1.1
CDC42BPA-212ENST00000478573 SPATA31C1P0DKV0 1188 aa8.2□□□□□ -1.1
CDC42BPA-212ENST00000478573 USP17L24Q0WX57 530 aa8.2□□□□□ -1.1
CDC42BPA-212ENST00000478573 BTLAQ7Z6A9 289 aa8.2□□□□□ -1.1
CDC42BPA-212ENST00000478573 TNFRSF25Q93038 417 aa8.2□□□□□ -1.1
CDC42BPA-212ENST00000478573 FAM229AH3BQW9 127 aa8.19□□□□□ -1.1
CDC42BPA-212ENST00000478573 KCNQ4P56696 695 aa8.19□□□□□ -1.1
CDC42BPA-212ENST00000478573 PTK7Q13308 1070 aa8.19□□□□□ -1.1
CDC42BPA-212ENST00000478573 HIF1AQ16665 826 aa8.19□□□□□ -1.1
CDC42BPA-212ENST00000478573 PRRT3Q5FWE3 981 aa8.19□□□□□ -1.1
CDC42BPA-212ENST00000478573 MDFIQ99750 246 aa8.19□□□□□ -1.1
CDC42BPA-212ENST00000478573 UBE2OQ9C0C9 1292 aaKnown RBP8.19□□□□□ -1.1
CDC42BPA-212ENST00000478573 VRTNQ9H8Y1 702 aa8.19□□□□□ -1.1
CDC42BPA-212ENST00000478573 STARD13Q9Y3M8 1113 aa8.19□□□□□ -1.1
CDC42BPA-212ENST00000478573 A6NJR5 290 aa8.18□□□□□ -1.1
CDC42BPA-212ENST00000478573 KANK4Q5T7N3 995 aaPredicted RBP8.18□□□□□ -1.1
CDC42BPA-212ENST00000478573 ANKMY2Q8IV38 441 aa8.18□□□□□ -1.1
CDC42BPA-212ENST00000478573 STAG2Q8N3U4 1231 aa8.18□□□□□ -1.1
CDC42BPA-212ENST00000478573 DOC2BQ14184 412 aa8.17□□□□□ -1.1
CDC42BPA-212ENST00000478573 MICALL1Q8N3F8 863 aa8.17□□□□□ -1.1
CDC42BPA-212ENST00000478573 FAM196BA6NMK8 535 aa8.16□□□□□ -1.1
CDC42BPA-212ENST00000478573 RTN1Q16799 776 aa8.16□□□□□ -1.1
CDC42BPA-212ENST00000478573 PNMA5Q96PV4 448 aa8.16□□□□□ -1.1
CDC42BPA-212ENST00000478573 APBA3O96018 575 aa8.15□□□□□ -1.1
CDC42BPA-212ENST00000478573 IGFBP4P22692 258 aa8.15□□□□□ -1.1
CDC42BPA-212ENST00000478573 GATA4P43694 442 aa8.15□□□□□ -1.1
CDC42BPA-212ENST00000478573 TGFBR3LH3BV60 316 aa8.14□□□□□ -1.11
CDC42BPA-212ENST00000478573 TRIM28Q13263 835 aaKnown RBP8.14□□□□□ -1.11
CDC42BPA-212ENST00000478573 CDCA8Q53HL2 280 aa8.14□□□□□ -1.11
CDC42BPA-212ENST00000478573 NUDT8Q8WV74 236 aa8.14□□□□□ -1.11
CDC42BPA-212ENST00000478573 VTI1AQ96AJ9 217 aa8.14□□□□□ -1.11
CDC42BPA-212ENST00000478573 KLK14Q9P0G3 267 aa8.14□□□□□ -1.11
CDC42BPA-212ENST00000478573 ZNF777Q9ULD5 760 aaPredicted RBP8.14□□□□□ -1.11
CDC42BPA-212ENST00000478573 SLC6A14Q9UN76 642 aa8.14□□□□□ -1.11
CDC42BPA-212ENST00000478573 LILRB5O75023 590 aa8.13□□□□□ -1.11
CDC42BPA-212ENST00000478573 NFKB1P19838 968 aa8.13□□□□□ -1.11
CDC42BPA-212ENST00000478573 TRAPPC3LQ5T215 181 aa8.13□□□□□ -1.11
CDC42BPA-212ENST00000478573 JPH1Q9HDC5 661 aaPredicted RBP8.13□□□□□ -1.11
CDC42BPA-212ENST00000478573 BCS1LQ9Y276 419 aa8.13□□□□□ -1.11
CDC42BPA-212ENST00000478573 NID1P14543 1247 aa8.12□□□□□ -1.11
CDC42BPA-212ENST00000478573 EPB42P16452 691 aa8.12□□□□□ -1.11
CDC42BPA-212ENST00000478573 DGKZQ13574 1117 aa8.12□□□□□ -1.11
CDC42BPA-212ENST00000478573 COL9A3Q14050 684 aaPredicted RBP8.12□□□□□ -1.11
CDC42BPA-212ENST00000478573 IER5Q5VY09 327 aa8.12□□□□□ -1.11
CDC42BPA-212ENST00000478573 GSX2Q9BZM3 304 aa8.12□□□□□ -1.11
CDC42BPA-212ENST00000478573 PRDM6Q9NQX0 595 aa8.12□□□□□ -1.11
CDC42BPA-212ENST00000478573 GTF3C5Q9Y5Q8 519 aaPredicted RBP8.12□□□□□ -1.11
CDC42BPA-212ENST00000478573 RFX1P22670 979 aa8.11□□□□□ -1.11
CDC42BPA-212ENST00000478573 IDH3AP50213 366 aa8.11□□□□□ -1.11
CDC42BPA-212ENST00000478573 CCINQ13939 588 aa8.11□□□□□ -1.11
CDC42BPA-212ENST00000478573 GRIK4Q16099 956 aa8.11□□□□□ -1.11
CDC42BPA-212ENST00000478573 C20orf204Q6ZNR8 217 aa8.11□□□□□ -1.11
CDC42BPA-212ENST00000478573 KRT25Q7Z3Z0 450 aa8.11□□□□□ -1.11
CDC42BPA-212ENST00000478573 C14orf37Q86TY3 774 aa8.11□□□□□ -1.11
CDC42BPA-212ENST00000478573 SEMA6BQ9H3T3 888 aa8.11□□□□□ -1.11
CDC42BPA-212ENST00000478573 DNAJB12Q9NXW2 375 aaKnown RBP8.11□□□□□ -1.11
CDC42BPA-212ENST00000478573 CFAP70Q5T0N1 1121 aa8.1□□□□□ -1.11
CDC42BPA-212ENST00000478573 FAM200AQ8TCP9 573 aa8.1□□□□□ -1.11
CDC42BPA-212ENST00000478573 ARXQ96QS3 562 aa8.1□□□□□ -1.11
CDC42BPA-212ENST00000478573 NACC1Q96RE7 527 aa8.1□□□□□ -1.11
CDC42BPA-212ENST00000478573 PSAPL1Q6NUJ1 521 aa8.09□□□□□ -1.11
CDC42BPA-212ENST00000478573 QTRT2Q9H974 415 aaKnown RBP8.09□□□□□ -1.11
CDC42BPA-212ENST00000478573 DMGDHQ9UI17 866 aaKnown RBP8.09□□□□□ -1.11
CDC42BPA-212ENST00000478573 FOXO3O43524 673 aa8.08□□□□□ -1.12
CDC42BPA-212ENST00000478573 WEE1P30291 646 aa8.08□□□□□ -1.12
CDC42BPA-212ENST00000478573 ARSDP51689 593 aa8.08□□□□□ -1.12
CDC42BPA-212ENST00000478573 XP32Q5T750 250 aa8.08□□□□□ -1.12
CDC42BPA-212ENST00000478573 EFCC1Q9HA90 598 aa8.08□□□□□ -1.12
CDC42BPA-212ENST00000478573 NAGPAQ9UK23 515 aa8.08□□□□□ -1.12
CDC42BPA-212ENST00000478573 RGS9O75916 674 aaPredicted RBP8.07□□□□□ -1.12
CDC42BPA-212ENST00000478573 CPB1P15086 417 aa8.07□□□□□ -1.12
CDC42BPA-212ENST00000478573 INPP5BP32019 993 aa8.07□□□□□ -1.12
CDC42BPA-212ENST00000478573 FAM35AQ86V20 835 aa8.07□□□□□ -1.12
CDC42BPA-212ENST00000478573 NOVA2Q9UNW9 492 aaKnown RBP8.07□□□□□ -1.12
CDC42BPA-212ENST00000478573 A0A0A0MRY4 1105 aa8.06□□□□□ -1.12
CDC42BPA-212ENST00000478573 MICAL2O94851 1124 aa8.06□□□□□ -1.12
CDC42BPA-212ENST00000478573 GRNP28799 593 aaKnown RBP8.06□□□□□ -1.12
CDC42BPA-212ENST00000478573 RAC1P63000 192 aa8.06□□□□□ -1.12
CDC42BPA-212ENST00000478573 MLLT1Q03111 559 aaPredicted RBP8.06□□□□□ -1.12
CDC42BPA-212ENST00000478573 TPSG1Q9NRR2 321 aa8.06□□□□□ -1.12
CDC42BPA-212ENST00000478573 USP20Q9Y2K6 914 aa8.06□□□□□ -1.12
CDC42BPA-212ENST00000478573 SASH3O75995 380 aa8.05□□□□□ -1.12
CDC42BPA-212ENST00000478573 RARAP10276 462 aa8.05□□□□□ -1.12
CDC42BPA-212ENST00000478573 TARSP26639 723 aaKnown RBP8.05□□□□□ -1.12
CDC42BPA-212ENST00000478573 AFF1P51825 1210 aaKnown RBP8.05□□□□□ -1.12
CDC42BPA-212ENST00000478573 C11orf91Q3C1V1 193 aa8.05□□□□□ -1.12
CDC42BPA-212ENST00000478573 DMRTC2Q8IXT2 367 aaPredicted RBP8.05□□□□□ -1.12
CDC42BPA-212ENST00000478573 PRIMPOLQ96LW4 560 aa8.05□□□□□ -1.12
CDC42BPA-212ENST00000478573 DHX32Q7L7V1 743 aaKnown RBP8.04□□□□□ -1.12
CDC42BPA-212ENST00000478573 Q8N3U1 123 aa8.04□□□□□ -1.12
CDC42BPA-212ENST00000478573 IFT43Q96FT9 208 aa8.04□□□□□ -1.12
CDC42BPA-212ENST00000478573 UTP3Q9NQZ2 479 aaKnown RBP eCLIP8.04□□□□□ -1.128e-7■■■■■ 122.6
Retrieved 100 of 20,778 RNA–protein pairs in 79.1 ms