RNA–Protein interactions for RNA: ENST00000478451.1

GPNMB-210, Transcript of glycoprotein nmb, humanhuman

TSL 4

Gene GPNMB, Length 862 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPNMB-210ENST00000478451 NGLY1Q96IV0 654 aa7.12□□□□□ -1.27
GPNMB-210ENST00000478451 HSH2DQ96JZ2 352 aa7.12□□□□□ -1.27
GPNMB-210ENST00000478451 EFSO43281 561 aa7.11□□□□□ -1.27
GPNMB-210ENST00000478451 ATG7O95352 703 aa7.11□□□□□ -1.27
GPNMB-210ENST00000478451 WEE1P30291 646 aa7.11□□□□□ -1.27
GPNMB-210ENST00000478451 LAMC2Q13753 1193 aa7.11□□□□□ -1.27
GPNMB-210ENST00000478451 FAM182BQ5T319 152 aa7.11□□□□□ -1.27
GPNMB-210ENST00000478451 CCDC82Q8N4S0 544 aa7.11□□□□□ -1.27
GPNMB-210ENST00000478451 GDF2Q9UK05 429 aaPredicted RBP7.11□□□□□ -1.27
GPNMB-210ENST00000478451 ACIN1Q9UKV3 1341 aaKnown RBP7.1□□□□□ -1.27
GPNMB-210ENST00000478451 FOXO3O43524 673 aa7.1□□□□□ -1.27
GPNMB-210ENST00000478451 DOC2BQ14184 412 aa7.1□□□□□ -1.27
GPNMB-210ENST00000478451 SWI5Q1ZZU3 235 aa7.1□□□□□ -1.27
GPNMB-210ENST00000478451 GOLGA6L1Q8N7Z2 621 aa7.1□□□□□ -1.27
GPNMB-210ENST00000478451 SUSD3Q96L08 255 aa7.1□□□□□ -1.27
GPNMB-210ENST00000478451 C1orf115Q9H7X2 142 aa7.1□□□□□ -1.27
GPNMB-210ENST00000478451 STRN4Q9NRL3 753 aa7.1□□□□□ -1.27
GPNMB-210ENST00000478451 MARK1Q9P0L2 795 aa7.1□□□□□ -1.27
GPNMB-210ENST00000478451 ANKIB1Q9P2G1 1089 aa7.1□□□□□ -1.27
GPNMB-210ENST00000478451 DCAF1Q9Y4B6 1507 aa7.1□□□□□ -1.27
GPNMB-210ENST00000478451 SHISA8B8ZZ34 492 aa7.09□□□□□ -1.27
GPNMB-210ENST00000478451 ARAFP10398 606 aa7.09□□□□□ -1.27
GPNMB-210ENST00000478451 CHRNA4P43681 627 aa7.09□□□□□ -1.27
GPNMB-210ENST00000478451 HIF1AQ16665 826 aa7.09□□□□□ -1.27
GPNMB-210ENST00000478451 RTN1Q16799 776 aa7.09□□□□□ -1.27
GPNMB-210ENST00000478451 LINC00114Q6XXX2 140 aa7.09□□□□□ -1.27
GPNMB-210ENST00000478451 SLCO4C1Q6ZQN7 724 aa7.09□□□□□ -1.27
GPNMB-210ENST00000478451 ZNF280CQ8ND82 737 aa7.09□□□□□ -1.27
GPNMB-210ENST00000478451 TYRO3Q06418 890 aa7.08□□□□□ -1.28
GPNMB-210ENST00000478451 VTI1AQ96AJ9 217 aa7.08□□□□□ -1.28
GPNMB-210ENST00000478451 RRAGCQ9HB90 399 aa7.08□□□□□ -1.28
GPNMB-210ENST00000478451 GGA1Q9UJY5 639 aa7.08□□□□□ -1.28
GPNMB-210ENST00000478451 SHROOM4Q9ULL8 1493 aa7.08□□□□□ -1.28
GPNMB-210ENST00000478451 ARID1BQ8NFD5 2236 aaPredicted RBP7.08□□□□□ -1.28
GPNMB-210ENST00000478451 GNB5O14775 395 aa7.07□□□□□ -1.28
GPNMB-210ENST00000478451 PRMT3O60678 531 aa7.07□□□□□ -1.28
GPNMB-210ENST00000478451 FAM69CQ0P6D2 419 aa7.07□□□□□ -1.28
GPNMB-210ENST00000478451 TMEM164Q5U3C3 297 aa7.07□□□□□ -1.28
GPNMB-210ENST00000478451 C1orf229Q6ZS94 237 aaPredicted RBP7.07□□□□□ -1.28
GPNMB-210ENST00000478451 PRIMPOLQ96LW4 560 aa7.07□□□□□ -1.28
GPNMB-210ENST00000478451 CEP63Q96MT8 703 aa7.07□□□□□ -1.28
GPNMB-210ENST00000478451 SUV39H2Q9H5I1 410 aa7.07□□□□□ -1.28
GPNMB-210ENST00000478451 QTRT2Q9H974 415 aaKnown RBP7.07□□□□□ -1.28
GPNMB-210ENST00000478451 BRD7Q9NPI1 651 aa7.07□□□□□ -1.28
GPNMB-210ENST00000478451 AVENQ9NQS1 362 aaPredicted RBP7.07□□□□□ -1.28
GPNMB-210ENST00000478451 NOP53Q9NZM5 478 aaKnown RBP7.07□□□□□ -1.28
GPNMB-210ENST00000478451 NEURL1BA8MQ27 555 aa7.06□□□□□ -1.28
GPNMB-210ENST00000478451 COBLO75128 1261 aa7.06□□□□□ -1.28
GPNMB-210ENST00000478451 ADH6P28332 368 aa7.06□□□□□ -1.28
GPNMB-210ENST00000478451 SFSWAPQ12872 951 aaKnown RBP7.06□□□□□ -1.28
GPNMB-210ENST00000478451 FKBP5Q13451 457 aaPredicted RBP7.06□□□□□ -1.28
GPNMB-210ENST00000478451 ZNF468Q5VIY5 522 aaPredicted RBP7.06□□□□□ -1.28
GPNMB-210ENST00000478451 EDARADDQ8WWZ3 215 aa7.06□□□□□ -1.28
GPNMB-210ENST00000478451 PRR12Q9ULL5 1215 aa7.06□□□□□ -1.28
GPNMB-210ENST00000478451 TGFBR3LH3BV60 316 aa7.05□□□□□ -1.28
GPNMB-210ENST00000478451 HOXB4P17483 251 aaPredicted RBP7.05□□□□□ -1.28
GPNMB-210ENST00000478451 OCLNQ16625 522 aa7.05□□□□□ -1.28
GPNMB-210ENST00000478451 IER5Q5VY09 327 aa7.05□□□□□ -1.28
GPNMB-210ENST00000478451 BTLAQ7Z6A9 289 aa7.05□□□□□ -1.28
GPNMB-210ENST00000478451 KLF15Q9UIH9 416 aa7.05□□□□□ -1.28
GPNMB-210ENST00000478451 EPXP11678 715 aa7.04□□□□□ -1.28
GPNMB-210ENST00000478451 KCNQ4P56696 695 aa7.04□□□□□ -1.28
GPNMB-210ENST00000478451 PCBP4P57723 403 aaKnown RBP7.04□□□□□ -1.28
GPNMB-210ENST00000478451 DGKZQ13574 1117 aa7.04□□□□□ -1.28
GPNMB-210ENST00000478451 RSPO4Q2I0M5 234 aaPredicted RBP7.04□□□□□ -1.28
GPNMB-210ENST00000478451 FCHSD1Q86WN1 690 aa7.04□□□□□ -1.28
GPNMB-210ENST00000478451 MYO19Q96H55 970 aa7.04□□□□□ -1.28
GPNMB-210ENST00000478451 SLC30A3Q99726 388 aa7.04□□□□□ -1.28
GPNMB-210ENST00000478451 KLK14Q9P0G3 267 aa7.04□□□□□ -1.28
GPNMB-210ENST00000478451 BCS1LQ9Y276 419 aa7.04□□□□□ -1.28
GPNMB-210ENST00000478451 AMPD1P23109 780 aa7.03□□□□□ -1.28
GPNMB-210ENST00000478451 GATA4P43694 442 aa7.03□□□□□ -1.28
GPNMB-210ENST00000478451 SPEM2Q0P670 501 aa7.03□□□□□ -1.28
GPNMB-210ENST00000478451 NKAPLQ5M9Q1 402 aa7.03□□□□□ -1.28
GPNMB-210ENST00000478451 SYT9Q86SS6 491 aa7.03□□□□□ -1.28
GPNMB-210ENST00000478451 CLP1Q92989 425 aaKnown RBP7.03□□□□□ -1.28
GPNMB-210ENST00000478451 KRTAP4-9Q9BYQ8 210 aa7.03□□□□□ -1.28
GPNMB-210ENST00000478451 UTP3Q9NQZ2 479 aaKnown RBP eCLIP7.03□□□□□ -1.28
GPNMB-210ENST00000478451 CXXC1Q9P0U4 656 aaPredicted RBP7.03□□□□□ -1.28
GPNMB-210ENST00000478451 KCNH4Q9UQ05 1017 aa7.03□□□□□ -1.28
GPNMB-210ENST00000478451 YBX3P16989 372 aaKnown RBP eCLIP7.02□□□□□ -1.29
GPNMB-210ENST00000478451 NEUROD1Q13562 356 aa7.01□□□□□ -1.29
GPNMB-210ENST00000478451 C11orf91Q3C1V1 193 aa7.01□□□□□ -1.29
GPNMB-210ENST00000478451 RAB44Q7Z6P3 723 aaPredicted RBP7.01□□□□□ -1.29
GPNMB-210ENST00000478451 ARID3AQ99856 593 aa7.01□□□□□ -1.29
GPNMB-210ENST00000478451 MKNK1Q9BUB5 465 aa7.01□□□□□ -1.29
GPNMB-210ENST00000478451 DMGDHQ9UI17 866 aaKnown RBP7.01□□□□□ -1.29
GPNMB-210ENST00000478451 SIN3BO75182 1162 aa7□□□□□ -1.29
GPNMB-210ENST00000478451 PPP1R15AO75807 674 aaPredicted RBP7□□□□□ -1.29
GPNMB-210ENST00000478451 IDH3AP50213 366 aa7□□□□□ -1.29
GPNMB-210ENST00000478451 LRP8Q14114 963 aa7□□□□□ -1.29
GPNMB-210ENST00000478451 CHSY3Q70JA7 882 aa7□□□□□ -1.29
GPNMB-210ENST00000478451 COL26A1Q96A83 441 aa7□□□□□ -1.29
GPNMB-210ENST00000478451 BTBD6Q96KE9 485 aa7□□□□□ -1.29
GPNMB-210ENST00000478451 SLAIN2Q9P270 581 aa7□□□□□ -1.29
GPNMB-210ENST00000478451 LRFN2Q9ULH4 789 aa7□□□□□ -1.29
GPNMB-210ENST00000478451 ELOA3CA0A087WX78 387 aaPredicted RBP6.99□□□□□ -1.29
GPNMB-210ENST00000478451 ELOA3DA6NLF2 546 aaPredicted RBP6.99□□□□□ -1.29
GPNMB-210ENST00000478451 EPB42P16452 691 aa6.99□□□□□ -1.29
GPNMB-210ENST00000478451 ATP2B4P23634 1241 aa6.99□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 14.8 ms