RNA–Protein interactions for RNA: ENST00000478282.1

U2AF1-210, Transcript of U2 small nuclear RNA auxiliary factor 1, humanhuman

TSL 2

Gene U2AF1, Length 3,344 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
U2AF1-210ENST00000478282 NUTM2GQ5VZR2 741 aa17.73■□□□□ 0.43
U2AF1-210ENST00000478282 HTATSF1O43719 755 aaKnown RBP17.72■□□□□ 0.43
U2AF1-210ENST00000478282 CWC27Q6UX04 472 aaKnown RBP17.72■□□□□ 0.43
U2AF1-210ENST00000478282 FAM200AQ8TCP9 573 aa17.72■□□□□ 0.43
U2AF1-210ENST00000478282 KIF1BPQ96EK5 621 aa17.72■□□□□ 0.43
U2AF1-210ENST00000478282 ZSCAN31Q96LW9 406 aaPredicted RBP17.72■□□□□ 0.43
U2AF1-210ENST00000478282 SPG7Q9UQ90 795 aa17.72■□□□□ 0.43
U2AF1-210ENST00000478282 VPS53Q5VIR6 699 aa17.72■□□□□ 0.43
U2AF1-210ENST00000478282 SH2B1Q9NRF2 756 aaPredicted RBP17.72■□□□□ 0.43
U2AF1-210ENST00000478282 SOX12O15370 315 aa17.72■□□□□ 0.43
U2AF1-210ENST00000478282 MAP3K5Q99683 1374 aa17.71■□□□□ 0.43
U2AF1-210ENST00000478282 PDRG1Q9NUG6 133 aa17.71■□□□□ 0.43
U2AF1-210ENST00000478282 VPS37CA5D8V6 355 aaPredicted RBP17.7■□□□□ 0.42
U2AF1-210ENST00000478282 LRRC59Q96AG4 307 aaKnown RBP17.7■□□□□ 0.42
U2AF1-210ENST00000478282 IGSF1Q8N6C5 1336 aa17.7■□□□□ 0.42
U2AF1-210ENST00000478282 HOXC9P31274 260 aa17.7■□□□□ 0.42
U2AF1-210ENST00000478282 USP42Q9H9J4 1324 aaKnown RBP17.7■□□□□ 0.42
U2AF1-210ENST00000478282 PTGS1P23219 599 aa17.7■□□□□ 0.42
U2AF1-210ENST00000478282 MAP3K11Q16584 847 aa17.7■□□□□ 0.42
U2AF1-210ENST00000478282 IP6K1Q92551 441 aa17.7■□□□□ 0.42
U2AF1-210ENST00000478282 JAKMIP1Q96N16 626 aaKnown RBP17.7■□□□□ 0.42
U2AF1-210ENST00000478282 TM6SF1Q9BZW5 370 aa17.7■□□□□ 0.42
U2AF1-210ENST00000478282 KIF20AO95235 890 aa17.69■□□□□ 0.42
U2AF1-210ENST00000478282 ST3GAL1Q11201 340 aa17.69■□□□□ 0.42
U2AF1-210ENST00000478282 SPDYE4A6NLX3 237 aa17.69■□□□□ 0.42
U2AF1-210ENST00000478282 EYA1Q99502 592 aa17.69■□□□□ 0.42
U2AF1-210ENST00000478282 NUP62CLQ9H1M0 184 aa17.69■□□□□ 0.42
U2AF1-210ENST00000478282 ZSWIM6Q9HCJ5 1215 aa17.69■□□□□ 0.42
U2AF1-210ENST00000478282 MRVI1Q9Y6F6 885 aa17.69■□□□□ 0.42
U2AF1-210ENST00000478282 UBAP1LF5GYI3 381 aa17.69■□□□□ 0.42
U2AF1-210ENST00000478282 SRGAP3O43295 1099 aa17.69■□□□□ 0.42
U2AF1-210ENST00000478282 ADCK5Q3MIX3 580 aa17.69■□□□□ 0.42
U2AF1-210ENST00000478282 TTC6Q86TZ1 520 aa17.69■□□□□ 0.42
U2AF1-210ENST00000478282 RUFY2Q8WXA3 655 aa17.69■□□□□ 0.42
U2AF1-210ENST00000478282 CYP46A1Q9Y6A2 500 aa17.69■□□□□ 0.42
U2AF1-210ENST00000478282 U2AF2P26368 475 aaKnown RBP eCLIP17.68■□□□□ 0.42
U2AF1-210ENST00000478282 KRT85P78386 507 aa17.68■□□□□ 0.42
U2AF1-210ENST00000478282 TYRO3Q06418 890 aa17.68■□□□□ 0.42
U2AF1-210ENST00000478282 KCNB2Q92953 911 aa17.68■□□□□ 0.42
U2AF1-210ENST00000478282 ELP1O95163 1332 aa17.68■□□□□ 0.42
U2AF1-210ENST00000478282 RGPD2P0DJD1 1756 aa17.68■□□□□ 0.42
U2AF1-210ENST00000478282 GNAT3A8MTJ3 354 aa17.68■□□□□ 0.42
U2AF1-210ENST00000478282 DTNBO60941 627 aa17.68■□□□□ 0.42
U2AF1-210ENST00000478282 TTC41PQ6P2S7 1318 aa17.67■□□□□ 0.42
U2AF1-210ENST00000478282 PTH1RQ03431 593 aa17.67■□□□□ 0.42
U2AF1-210ENST00000478282 GLRX3O76003 335 aaKnown RBP17.67■□□□□ 0.42
U2AF1-210ENST00000478282 PRPF40BQ6NWY9 871 aaKnown RBP17.67■□□□□ 0.42
U2AF1-210ENST00000478282 COL14A1Q05707 1796 aaKnown RBP17.67■□□□□ 0.42
U2AF1-210ENST00000478282 ME3Q16798 604 aa17.67■□□□□ 0.42
U2AF1-210ENST00000478282 LUZP1Q86V48 1076 aa17.67■□□□□ 0.42
U2AF1-210ENST00000478282 LIG1P18858 919 aa17.66■□□□□ 0.42
U2AF1-210ENST00000478282 FEZ1Q99689 392 aa17.66■□□□□ 0.42
U2AF1-210ENST00000478282 CCDC171Q6TFL3 1326 aa17.66■□□□□ 0.42
U2AF1-210ENST00000478282 PDIA4P13667 645 aaKnown RBP17.66■□□□□ 0.42
U2AF1-210ENST00000478282 SYCP1Q15431 976 aa17.66■□□□□ 0.42
U2AF1-210ENST00000478282 HSP90AB4PQ58FF6 505 aa17.66■□□□□ 0.42
U2AF1-210ENST00000478282 PHAXQ9H814 394 aaKnown RBP17.66■□□□□ 0.42
U2AF1-210ENST00000478282 NCBP1Q09161 790 aaKnown RBP17.65■□□□□ 0.42
U2AF1-210ENST00000478282 HDGFL1Q5TGJ6 251 aa17.65■□□□□ 0.42
U2AF1-210ENST00000478282 BABAM1Q9NWV8 329 aa17.65■□□□□ 0.42
U2AF1-210ENST00000478282 LARP1BQ659C4 914 aaKnown RBP17.65■□□□□ 0.42
U2AF1-210ENST00000478282 CCDC186Q7Z3E2 898 aa17.65■□□□□ 0.42
U2AF1-210ENST00000478282 CAMK4Q16566 473 aa17.65■□□□□ 0.42
U2AF1-210ENST00000478282 NECAB1Q8N987 351 aa17.65■□□□□ 0.42
U2AF1-210ENST00000478282 CBX8Q9HC52 389 aa17.65■□□□□ 0.42
U2AF1-210ENST00000478282 SMTNL1A8MU46 457 aa17.64■□□□□ 0.41
U2AF1-210ENST00000478282 CHMP3Q9Y3E7 222 aa17.64■□□□□ 0.41
U2AF1-210ENST00000478282 TAF7Q15545 349 aaPredicted RBP17.64■□□□□ 0.41
U2AF1-210ENST00000478282 CDC37L1Q7L3B6 337 aa17.64■□□□□ 0.41
U2AF1-210ENST00000478282 TNMDQ9H2S6 317 aa17.64■□□□□ 0.41
U2AF1-210ENST00000478282 NBPF7P0C2Y1 421 aaPredicted RBP17.64■□□□□ 0.41
U2AF1-210ENST00000478282 AMPHP49418 695 aa17.64■□□□□ 0.41
U2AF1-210ENST00000478282 NECTIN1Q15223 517 aa17.64■□□□□ 0.41
U2AF1-210ENST00000478282 ANO6Q4KMQ2 910 aa17.64■□□□□ 0.41
U2AF1-210ENST00000478282 IL17REQ8NFR9 667 aa17.64■□□□□ 0.41
U2AF1-210ENST00000478282 LRMPQ12912 555 aa17.63■□□□□ 0.41
U2AF1-210ENST00000478282 ARHGAP30Q7Z6I6 1101 aaPredicted RBP17.63■□□□□ 0.41
U2AF1-210ENST00000478282 TPCN1Q9ULQ1 816 aa17.63■□□□□ 0.41
U2AF1-210ENST00000478282 PLA2G4DQ86XP0 818 aa17.63■□□□□ 0.41
U2AF1-210ENST00000478282 C16orf45Q96MC5 204 aaPredicted RBP17.63■□□□□ 0.41
U2AF1-210ENST00000478282 ZKSCAN1P17029 563 aaPredicted RBP17.62■□□□□ 0.41
U2AF1-210ENST00000478282 PDCP20941 246 aa17.62■□□□□ 0.41
U2AF1-210ENST00000478282 ZNF75DP51815 510 aa17.62■□□□□ 0.41
U2AF1-210ENST00000478282 FERMT3Q86UX7 667 aa17.62■□□□□ 0.41
U2AF1-210ENST00000478282 DRC7Q8IY82 874 aa17.62■□□□□ 0.41
U2AF1-210ENST00000478282 CKAP2LQ8IYA6 745 aa17.62■□□□□ 0.41
U2AF1-210ENST00000478282 CABLES1Q8TDN4 633 aa17.62■□□□□ 0.41
U2AF1-210ENST00000478282 DACT1Q9NYF0 836 aa17.62■□□□□ 0.41
U2AF1-210ENST00000478282 NRAPQ86VF7 1730 aa17.62■□□□□ 0.41
U2AF1-210ENST00000478282 RBM43Q6ZSC3 357 aaKnown RBP17.62■□□□□ 0.41
U2AF1-210ENST00000478282 DDX19AQ9NUU7 478 aaKnown RBP17.62■□□□□ 0.41
U2AF1-210ENST00000478282 OGFRQ9NZT2 677 aa17.62■□□□□ 0.41
U2AF1-210ENST00000478282 PLCH1Q4KWH8 1693 aa17.62■□□□□ 0.41
U2AF1-210ENST00000478282 ZSCAN25Q6NSZ9 544 aa17.62■□□□□ 0.41
U2AF1-210ENST00000478282 TDRD7Q8NHU6 1098 aaKnown RBP17.62■□□□□ 0.41
U2AF1-210ENST00000478282 AXIN2Q9Y2T1 843 aa17.62■□□□□ 0.41
U2AF1-210ENST00000478282 OS9Q13438 667 aaPredicted RBP17.61■□□□□ 0.41
U2AF1-210ENST00000478282 FAM173BQ6P4H8 233 aa17.61■□□□□ 0.41
U2AF1-210ENST00000478282 LMOD2Q6P5Q4 547 aa17.61■□□□□ 0.41
U2AF1-210ENST00000478282 TRIM5Q9C035 493 aa17.61■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 10.7 ms