RNA–Protein interactions for RNA: ENST00000478169.5

CCM2-210, Transcript of CCM2 scaffold protein, humanhuman

TSL 4

Gene CCM2, Length 542 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2-210ENST00000478169 MAP3K15Q6ZN16 1313 aa12.81□□□□□ -0.36
CCM2-210ENST00000478169 IBTKQ9P2D0 1353 aaPredicted RBP12.81□□□□□ -0.36
CCM2-210ENST00000478169 TRPM7Q96QT4 1865 aa12.8□□□□□ -0.36
CCM2-210ENST00000478169 RASSF10A6NK89 507 aa12.8□□□□□ -0.36
CCM2-210ENST00000478169 EIF6P56537 245 aaKnown RBP12.8□□□□□ -0.36
CCM2-210ENST00000478169 DEFB115Q30KQ5 88 aa12.8□□□□□ -0.36
CCM2-210ENST00000478169 KIF6Q6ZMV9 814 aa12.8□□□□□ -0.36
CCM2-210ENST00000478169 NUTM1Q86Y26 1132 aa12.8□□□□□ -0.36
CCM2-210ENST00000478169 WBP1LQ9NX94 342 aa12.8□□□□□ -0.36
CCM2-210ENST00000478169 ABCC12Q96J65 1359 aa12.8□□□□□ -0.36
CCM2-210ENST00000478169 EIF4A1P60842 406 aaKnown RBP12.79□□□□□ -0.36
CCM2-210ENST00000478169 MAP1SQ66K74 1059 aaPredicted RBP12.79□□□□□ -0.36
CCM2-210ENST00000478169 NGEFQ8N5V2 710 aa12.79□□□□□ -0.36
CCM2-210ENST00000478169 RPGRQ92834 1020 aaKnown RBP12.79□□□□□ -0.36
CCM2-210ENST00000478169 LMOD1P29536 600 aaPredicted RBP12.78□□□□□ -0.36
CCM2-210ENST00000478169 RBM17Q96I25 401 aaKnown RBP12.78□□□□□ -0.36
CCM2-210ENST00000478169 CRAMP1Q96RY5 1269 aa12.78□□□□□ -0.36
CCM2-210ENST00000478169 RRP7AQ9Y3A4 280 aaKnown RBP12.78□□□□□ -0.36
CCM2-210ENST00000478169 MAP2K1Q02750 393 aaPredicted RBP12.77□□□□□ -0.37
CCM2-210ENST00000478169 SUSD4Q5VX71 490 aa12.77□□□□□ -0.37
CCM2-210ENST00000478169 TTLL7Q6ZT98 887 aa12.77□□□□□ -0.37
CCM2-210ENST00000478169 ZNF34Q8IZ26 560 aa12.77□□□□□ -0.37
CCM2-210ENST00000478169 LARGE2Q8N3Y3 721 aa12.77□□□□□ -0.37
CCM2-210ENST00000478169 GJA3Q9Y6H8 435 aa12.77□□□□□ -0.37
CCM2-210ENST00000478169 ERBB4Q15303 1308 aa12.77□□□□□ -0.37
CCM2-210ENST00000478169 UBN2Q6ZU65 1347 aa12.77□□□□□ -0.37
CCM2-210ENST00000478169 COL4A5P29400 1685 aa12.77□□□□□ -0.37
CCM2-210ENST00000478169 LTBP1Q14766 1721 aa12.76□□□□□ -0.37
CCM2-210ENST00000478169 MYL6BP14649 208 aa12.76□□□□□ -0.37
CCM2-210ENST00000478169 LBX1P52954 281 aa12.76□□□□□ -0.37
CCM2-210ENST00000478169 GIGYF2Q6Y7W6 1299 aaKnown RBP12.76□□□□□ -0.37
CCM2-210ENST00000478169 PPP1R42Q7Z4L9 355 aa12.76□□□□□ -0.37
CCM2-210ENST00000478169 PLEKHF1Q96S99 279 aa12.76□□□□□ -0.37
CCM2-210ENST00000478169 VPS33BQ9H267 617 aa12.76□□□□□ -0.37
CCM2-210ENST00000478169 PNNQ9H307 717 aaKnown RBP12.76□□□□□ -0.37
CCM2-210ENST00000478169 ZBTB3Q9H5J0 574 aa12.76□□□□□ -0.37
CCM2-210ENST00000478169 DDX21Q9NR30 783 aaKnown RBP eCLIP12.76□□□□□ -0.37
CCM2-210ENST00000478169 ABT1Q9ULW3 272 aaKnown RBP12.76□□□□□ -0.37
CCM2-210ENST00000478169 WDR33Q9C0J8 1336 aaKnown RBP12.76□□□□□ -0.37
CCM2-210ENST00000478169 PPEF1O14829 653 aaPredicted RBP12.75□□□□□ -0.37
CCM2-210ENST00000478169 NTSR2O95665 410 aa12.75□□□□□ -0.37
CCM2-210ENST00000478169 GPTP24298 496 aa12.75□□□□□ -0.37
CCM2-210ENST00000478169 SCNN1DP51172 638 aa12.75□□□□□ -0.37
CCM2-210ENST00000478169 NFE2L2Q16236 605 aa12.75□□□□□ -0.37
CCM2-210ENST00000478169 PARP10Q53GL7 1025 aa12.75□□□□□ -0.37
CCM2-210ENST00000478169 USP50Q70EL3 339 aaPredicted RBP12.75□□□□□ -0.37
CCM2-210ENST00000478169 NLRP3Q96P20 1036 aa12.75□□□□□ -0.37
CCM2-210ENST00000478169 TMX4Q9H1E5 349 aaPredicted RBP12.75□□□□□ -0.37
CCM2-210ENST00000478169 EPS15P42566 896 aa12.74□□□□□ -0.37
CCM2-210ENST00000478169 NIM1KQ8IY84 436 aa12.74□□□□□ -0.37
CCM2-210ENST00000478169 ANKRD36CQ5JPF3 1778 aa12.74□□□□□ -0.37
CCM2-210ENST00000478169 HSPA8P11142 646 aaKnown RBP12.73□□□□□ -0.37
CCM2-210ENST00000478169 ECE1P42892 770 aa12.73□□□□□ -0.37
CCM2-210ENST00000478169 SLC10A5Q5PT55 438 aa12.73□□□□□ -0.37
CCM2-210ENST00000478169 THUMPD2Q9BTF0 503 aaKnown RBP12.73□□□□□ -0.37
CCM2-210ENST00000478169 ATP6V0A2Q9Y487 856 aa12.73□□□□□ -0.37
CCM2-210ENST00000478169 THSD7BQ9C0I4 1608 aa12.73□□□□□ -0.37
CCM2-210ENST00000478169 LAMB2P55268 1798 aa12.72□□□□□ -0.37
CCM2-210ENST00000478169 MAPK8IP3Q9UPT6 1336 aa12.72□□□□□ -0.37
CCM2-210ENST00000478169 TCERG1O14776 1098 aaKnown RBP12.72□□□□□ -0.37
CCM2-210ENST00000478169 PPIP5K2O43314 1243 aa12.72□□□□□ -0.37
CCM2-210ENST00000478169 C3orf67Q6ZVT6 689 aa12.72□□□□□ -0.37
CCM2-210ENST00000478169 SUPT20HQ8NEM7 779 aa12.72□□□□□ -0.37
CCM2-210ENST00000478169 UTP14AQ9BVJ6 771 aaKnown RBP12.72□□□□□ -0.37
CCM2-210ENST00000478169 BABAM1Q9NWV8 329 aa12.72□□□□□ -0.37
CCM2-210ENST00000478169 BBOX1O75936 387 aa12.71□□□□□ -0.37
CCM2-210ENST00000478169 CST9Q5W186 159 aa12.71□□□□□ -0.37
CCM2-210ENST00000478169 LRP10Q7Z4F1 713 aa12.71□□□□□ -0.37
CCM2-210ENST00000478169 CAPNS2Q96L46 248 aa12.71□□□□□ -0.37
CCM2-210ENST00000478169 BEGAINQ9BUH8 593 aa12.71□□□□□ -0.37
CCM2-210ENST00000478169 RTFDC1Q9BY42 306 aaPredicted RBP12.71□□□□□ -0.37
CCM2-210ENST00000478169 ADARB2Q9NS39 739 aaKnown RBP12.71□□□□□ -0.37
CCM2-210ENST00000478169 GPRC5DQ9NZD1 345 aa12.71□□□□□ -0.37
CCM2-210ENST00000478169 TSPYL4Q9UJ04 414 aa12.71□□□□□ -0.37
CCM2-210ENST00000478169 ZNRF3Q9ULT6 936 aa12.71□□□□□ -0.37
CCM2-210ENST00000478169 ABCC4O15439 1325 aa12.7□□□□□ -0.38
CCM2-210ENST00000478169 PDIA6Q15084 440 aa12.7□□□□□ -0.38
CCM2-210ENST00000478169 AOC3Q16853 763 aa12.7□□□□□ -0.38
CCM2-210ENST00000478169 HSP90AB3PQ58FF7 597 aa12.7□□□□□ -0.38
CCM2-210ENST00000478169 SP8Q8IXZ3 490 aa12.7□□□□□ -0.38
CCM2-210ENST00000478169 GPR101Q96P66 508 aaPredicted RBP12.7□□□□□ -0.38
CCM2-210ENST00000478169 TLL2Q9Y6L7 1015 aa12.7□□□□□ -0.38
CCM2-210ENST00000478169 TRAF5O00463 557 aa12.69□□□□□ -0.38
CCM2-210ENST00000478169 EIF2S2P20042 333 aaKnown RBP12.69□□□□□ -0.38
CCM2-210ENST00000478169 MAP2K2P36507 400 aa12.69□□□□□ -0.38
CCM2-210ENST00000478169 FMR1Q06787 632 aaKnown RBP eCLIP12.69□□□□□ -0.38
CCM2-210ENST00000478169 CXCL9Q07325 125 aa12.69□□□□□ -0.38
CCM2-210ENST00000478169 CYP4F22Q6NT55 531 aa12.69□□□□□ -0.38
CCM2-210ENST00000478169 PAXIP1Q6ZW49 1069 aaPredicted RBP12.69□□□□□ -0.38
CCM2-210ENST00000478169 SLC51AQ86UW1 340 aa12.69□□□□□ -0.38
CCM2-210ENST00000478169 ABHD8Q96I13 439 aa12.69□□□□□ -0.38
CCM2-210ENST00000478169 TAF1P21675 1872 aa12.69□□□□□ -0.38
CCM2-210ENST00000478169 POLR2AP24928 1970 aaKnown RBP12.69□□□□□ -0.38
CCM2-210ENST00000478169 CDHR2Q9BYE9 1310 aa12.68□□□□□ -0.38
CCM2-210ENST00000478169 RIPK4P57078 832 aa12.68□□□□□ -0.38
CCM2-210ENST00000478169 TNIP1Q15025 636 aa12.68□□□□□ -0.38
CCM2-210ENST00000478169 CIAPIN1Q6FI81 312 aa12.68□□□□□ -0.38
CCM2-210ENST00000478169 DPP8Q6V1X1 898 aaPredicted RBP12.68□□□□□ -0.38
CCM2-210ENST00000478169 MPNDQ8N594 471 aa12.68□□□□□ -0.38
CCM2-210ENST00000478169 ZC3H15Q8WU90 426 aaKnown RBP12.68□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 12.9 ms