RNA–Protein interactions for RNA: ENST00000477891.1

MINDY3-206, Transcript of MINDY lysine 48 deubiquitinase 3, humanhuman

TSL 1 (best)

Gene MINDY3, Length 2,307 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MINDY3-206ENST00000477891 NBPF10Q6P3W6 841 aaKnown RBP12.7□□□□□ -0.38
MINDY3-206ENST00000477891 NBPF15Q8N660 670 aa12.7□□□□□ -0.38
MINDY3-206ENST00000477891 DDX54Q8TDD1 881 aaKnown RBP12.7□□□□□ -0.38
MINDY3-206ENST00000477891 NMIQ13287 307 aaPredicted RBP12.7□□□□□ -0.38
MINDY3-206ENST00000477891 NECTIN1Q15223 517 aa12.7□□□□□ -0.38
MINDY3-206ENST00000477891 EDC3Q96F86 508 aaKnown RBP12.7□□□□□ -0.38
MINDY3-206ENST00000477891 A0A087WZG4 1122 aa12.69□□□□□ -0.38
MINDY3-206ENST00000477891 ZNF445P59923 1031 aa12.69□□□□□ -0.38
MINDY3-206ENST00000477891 PRDM11Q9NQV5 511 aa12.69□□□□□ -0.38
MINDY3-206ENST00000477891 LIMCH1Q9UPQ0 1083 aa12.69□□□□□ -0.38
MINDY3-206ENST00000477891 LARGE1O95461 756 aa12.68□□□□□ -0.38
MINDY3-206ENST00000477891 TOM1L2Q6ZVM7 507 aa12.68□□□□□ -0.38
MINDY3-206ENST00000477891 COPRSQ9NQ92 184 aa12.68□□□□□ -0.38
MINDY3-206ENST00000477891 TMEM63CQ9P1W3 806 aa12.68□□□□□ -0.38
MINDY3-206ENST00000477891 MRC1P22897 1456 aa12.68□□□□□ -0.38
MINDY3-206ENST00000477891 A0A0D9SFI3 127 aa12.68□□□□□ -0.38
MINDY3-206ENST00000477891 CASP7P55210 303 aa12.68□□□□□ -0.38
MINDY3-206ENST00000477891 TFCP2Q12800 502 aa12.68□□□□□ -0.38
MINDY3-206ENST00000477891 RABL6Q3YEC7 729 aaPredicted RBP12.68□□□□□ -0.38
MINDY3-206ENST00000477891 ZCRB1Q8TBF4 217 aaKnown RBP12.68□□□□□ -0.38
MINDY3-206ENST00000477891 KCNB2Q92953 911 aa12.68□□□□□ -0.38
MINDY3-206ENST00000477891 JAKMIP1Q96N16 626 aaKnown RBP12.68□□□□□ -0.38
MINDY3-206ENST00000477891 GDPD2Q9HCC8 539 aa12.68□□□□□ -0.38
MINDY3-206ENST00000477891 DBNLQ9UJU6 430 aaKnown RBP12.68□□□□□ -0.38
MINDY3-206ENST00000477891 NDUFB9Q9Y6M9 179 aa12.68□□□□□ -0.38
MINDY3-206ENST00000477891 CCDC171Q6TFL3 1326 aa12.68□□□□□ -0.38
MINDY3-206ENST00000477891 A1BGP04217 495 aa12.67□□□□□ -0.38
MINDY3-206ENST00000477891 PRIM1P49642 420 aaKnown RBP12.67□□□□□ -0.38
MINDY3-206ENST00000477891 PLBD2Q8NHP8 589 aa12.67□□□□□ -0.38
MINDY3-206ENST00000477891 MAP4K1Q92918 833 aa12.67□□□□□ -0.38
MINDY3-206ENST00000477891 WDR17Q8IZU2 1322 aa12.67□□□□□ -0.38
MINDY3-206ENST00000477891 TTLL7Q6ZT98 887 aa12.67□□□□□ -0.38
MINDY3-206ENST00000477891 FSD1Q9BTV5 496 aa12.67□□□□□ -0.38
MINDY3-206ENST00000477891 ZSWIM6Q9HCJ5 1215 aa12.67□□□□□ -0.38
MINDY3-206ENST00000477891 RBM8AQ9Y5S9 174 aaKnown RBP12.67□□□□□ -0.38
MINDY3-206ENST00000477891 CHGBP05060 677 aa12.66□□□□□ -0.38
MINDY3-206ENST00000477891 NASPP49321 788 aaPredicted RBP12.66□□□□□ -0.38
MINDY3-206ENST00000477891 TNNI3KQ59H18 835 aa12.66□□□□□ -0.38
MINDY3-206ENST00000477891 CREB3L3Q68CJ9 461 aa12.66□□□□□ -0.38
MINDY3-206ENST00000477891 PDRG1Q9NUG6 133 aa12.66□□□□□ -0.38
MINDY3-206ENST00000477891 SLAIN2Q9P270 581 aa12.66□□□□□ -0.38
MINDY3-206ENST00000477891 TAF6LQ9Y6J9 622 aa12.66□□□□□ -0.38
MINDY3-206ENST00000477891 FPGT-TNNI3KV9GXZ4 949 aa12.66□□□□□ -0.38
MINDY3-206ENST00000477891 RPAP1Q9BWH6 1393 aaPredicted RBP12.66□□□□□ -0.38
MINDY3-206ENST00000477891 LMBR1LQ6UX01 489 aa12.66□□□□□ -0.38
MINDY3-206ENST00000477891 ZNF589Q86UQ0 364 aaPredicted RBP12.66□□□□□ -0.38
MINDY3-206ENST00000477891 RBSNQ9H1K0 784 aa12.66□□□□□ -0.38
MINDY3-206ENST00000477891 SNRKQ9NRH2 765 aa12.66□□□□□ -0.38
MINDY3-206ENST00000477891 ABCC6O95255 1503 aa12.65□□□□□ -0.38
MINDY3-206ENST00000477891 VPS53Q5VIR6 699 aa12.65□□□□□ -0.38
MINDY3-206ENST00000477891 TM6SF1Q9BZW5 370 aa12.65□□□□□ -0.38
MINDY3-206ENST00000477891 WDR33Q9C0J8 1336 aaKnown RBP12.65□□□□□ -0.38
MINDY3-206ENST00000477891 PKD1L3Q7Z443 1732 aa12.65□□□□□ -0.38
MINDY3-206ENST00000477891 GADD45BO75293 160 aaPredicted RBP12.65□□□□□ -0.39
MINDY3-206ENST00000477891 SYT1P21579 422 aa12.65□□□□□ -0.39
MINDY3-206ENST00000477891 FOXO4P98177 505 aa12.65□□□□□ -0.39
MINDY3-206ENST00000477891 DBNDD2Q9BQY9 259 aa12.65□□□□□ -0.39
MINDY3-206ENST00000477891 CYP46A1Q9Y6A2 500 aa12.65□□□□□ -0.39
MINDY3-206ENST00000477891 SOS2Q07890 1332 aaPredicted RBP12.64□□□□□ -0.39
MINDY3-206ENST00000477891 PCDH11XQ9BZA7 1347 aa12.64□□□□□ -0.39
MINDY3-206ENST00000477891 PCDH11YQ9BZA8 1340 aa12.64□□□□□ -0.39
MINDY3-206ENST00000477891 PLEKHG2Q9H7P9 1386 aa12.64□□□□□ -0.39
MINDY3-206ENST00000477891 H7C1W4 665 aa12.64□□□□□ -0.39
MINDY3-206ENST00000477891 HIP1O00291 1037 aa12.64□□□□□ -0.39
MINDY3-206ENST00000477891 SLC27A2O14975 620 aa12.64□□□□□ -0.39
MINDY3-206ENST00000477891 ZKSCAN1P17029 563 aaPredicted RBP12.64□□□□□ -0.39
MINDY3-206ENST00000477891 KCNJ4P48050 445 aa12.64□□□□□ -0.39
MINDY3-206ENST00000477891 ST3GAL1Q11201 340 aa12.64□□□□□ -0.39
MINDY3-206ENST00000477891 CCDC83Q8IWF9 413 aa12.64□□□□□ -0.39
MINDY3-206ENST00000477891 STRN4Q9NRL3 753 aa12.64□□□□□ -0.39
MINDY3-206ENST00000477891 SYCE3A1L190 88 aa12.63□□□□□ -0.39
MINDY3-206ENST00000477891 ERVV-2B6SEH9 535 aa12.63□□□□□ -0.39
MINDY3-206ENST00000477891 ATP5JP18859 108 aa12.63□□□□□ -0.39
MINDY3-206ENST00000477891 ME3Q16798 604 aa12.63□□□□□ -0.39
MINDY3-206ENST00000477891 USP48Q86UV5 1035 aa12.63□□□□□ -0.39
MINDY3-206ENST00000477891 TCEANC2Q96MN5 208 aa12.63□□□□□ -0.39
MINDY3-206ENST00000477891 GLI3P10071 1580 aa12.63□□□□□ -0.39
MINDY3-206ENST00000477891 ERBB4Q15303 1308 aa12.63□□□□□ -0.39
MINDY3-206ENST00000477891 NKX1-1Q15270 411 aaPredicted RBP12.63□□□□□ -0.39
MINDY3-206ENST00000477891 ZBTB3Q9H5J0 574 aa12.63□□□□□ -0.39
MINDY3-206ENST00000477891 TPCN1Q9ULQ1 816 aa12.63□□□□□ -0.39
MINDY3-206ENST00000477891 SMC3Q9UQE7 1217 aa12.63□□□□□ -0.39
MINDY3-206ENST00000477891 CCDC9Q9Y3X0 531 aaKnown RBP12.63□□□□□ -0.39
MINDY3-206ENST00000477891 ZSCAN21Q9Y5A6 473 aaPredicted RBP12.63□□□□□ -0.39
MINDY3-206ENST00000477891 COL15A1P39059 1388 aa12.63□□□□□ -0.39
MINDY3-206ENST00000477891 TCHHQ07283 1943 aa12.63□□□□□ -0.39
MINDY3-206ENST00000477891 STX6O43752 255 aa12.62□□□□□ -0.39
MINDY3-206ENST00000477891 ZSCAN22P10073 491 aaPredicted RBP12.62□□□□□ -0.39
MINDY3-206ENST00000477891 IL2RBP14784 551 aa12.62□□□□□ -0.39
MINDY3-206ENST00000477891 NECAB1Q8N987 351 aa12.62□□□□□ -0.39
MINDY3-206ENST00000477891 CHMP3Q9Y3E7 222 aa12.62□□□□□ -0.39
MINDY3-206ENST00000477891 XIRP1Q702N8 1843 aaKnown RBP12.62□□□□□ -0.39
MINDY3-206ENST00000477891 ZNF335Q9H4Z2 1342 aaPredicted RBP12.62□□□□□ -0.39
MINDY3-206ENST00000477891 MED23Q9ULK4 1368 aa12.62□□□□□ -0.39
MINDY3-206ENST00000477891 COL5A2P05997 1499 aaPredicted RBP12.62□□□□□ -0.39
MINDY3-206ENST00000477891 TAF5LO75529 589 aa12.62□□□□□ -0.39
MINDY3-206ENST00000477891 ATG9AQ7Z3C6 839 aa12.62□□□□□ -0.39
MINDY3-206ENST00000477891 CARD10Q9BWT7 1032 aa12.62□□□□□ -0.39
MINDY3-206ENST00000477891 MBD3O95983 291 aa12.61□□□□□ -0.39
MINDY3-206ENST00000477891 GJB2P29033 226 aa12.61□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 11.6 ms