RNA–Protein interactions for RNA: ENST00000477654.3

RN7SL842P-201, Transcript of RNA, 7SL, cytoplasmic 842, pseudogene, humanhuman

BASIC

Gene RN7SL842P, Length 300 nt, Biotype misc RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RN7SL842P-201ENST00000477654 FKBP5Q13451 457 aaPredicted RBP13.75□□□□□ -0.21
RN7SL842P-201ENST00000477654 CWF19L2Q2TBE0 894 aaKnown RBP13.75□□□□□ -0.21
RN7SL842P-201ENST00000477654 PARP10Q53GL7 1025 aa13.75□□□□□ -0.21
RN7SL842P-201ENST00000477654 HSP90AB3PQ58FF7 597 aa13.75□□□□□ -0.21
RN7SL842P-201ENST00000477654 RTL5Q5HYW3 569 aaPredicted RBP13.75□□□□□ -0.21
RN7SL842P-201ENST00000477654 UTP14AQ9BVJ6 771 aaKnown RBP13.75□□□□□ -0.21
RN7SL842P-201ENST00000477654 GOLGB1Q14789 3259 aaKnown RBP13.74□□□□□ -0.21
RN7SL842P-201ENST00000477654 RARSP54136 660 aaKnown RBP13.74□□□□□ -0.21
RN7SL842P-201ENST00000477654 ST5P78524 1137 aa13.74□□□□□ -0.21
RN7SL842P-201ENST00000477654 FAM89AQ96GI7 184 aa13.74□□□□□ -0.21
RN7SL842P-201ENST00000477654 CHMP4AQ9BY43 222 aa13.74□□□□□ -0.21
RN7SL842P-201ENST00000477654 TRMT112Q9UI30 125 aaKnown RBP13.74□□□□□ -0.21
RN7SL842P-201ENST00000477654 BRCA1P38398 1863 aaKnown RBP13.74□□□□□ -0.21
RN7SL842P-201ENST00000477654 NPHP1O15259 732 aa13.73□□□□□ -0.21
RN7SL842P-201ENST00000477654 DDX58O95786 925 aaKnown RBP13.73□□□□□ -0.21
RN7SL842P-201ENST00000477654 SRGNP10124 158 aa13.73□□□□□ -0.21
RN7SL842P-201ENST00000477654 GPR162Q16538 588 aa13.73□□□□□ -0.21
RN7SL842P-201ENST00000477654 SLC10A5Q5PT55 438 aa13.73□□□□□ -0.21
RN7SL842P-201ENST00000477654 DNAAF4Q8WXU2 420 aa13.73□□□□□ -0.21
RN7SL842P-201ENST00000477654 NYXQ9GZU5 481 aa13.73□□□□□ -0.21
RN7SL842P-201ENST00000477654 TNNQ9UQP3 1299 aa13.73□□□□□ -0.21
RN7SL842P-201ENST00000477654 BCS1LQ9Y276 419 aa13.73□□□□□ -0.21
RN7SL842P-201ENST00000477654 COL4A1P02462 1669 aa13.72□□□□□ -0.21
RN7SL842P-201ENST00000477654 NEURL1BA8MQ27 555 aa13.72□□□□□ -0.21
RN7SL842P-201ENST00000477654 H0YIN7 160 aa13.72□□□□□ -0.21
RN7SL842P-201ENST00000477654 BCAR3O75815 825 aa13.72□□□□□ -0.21
RN7SL842P-201ENST00000477654 GTF2E1P29083 439 aaPredicted RBP13.72□□□□□ -0.21
RN7SL842P-201ENST00000477654 PDE6BP35913 854 aa13.72□□□□□ -0.21
RN7SL842P-201ENST00000477654 BEND3Q5T5X7 828 aa13.72□□□□□ -0.21
RN7SL842P-201ENST00000477654 PPP1R42Q7Z4L9 355 aa13.72□□□□□ -0.21
RN7SL842P-201ENST00000477654 SMC4Q9NTJ3 1288 aa13.72□□□□□ -0.21
RN7SL842P-201ENST00000477654 PIM2Q9P1W9 311 aa13.72□□□□□ -0.21
RN7SL842P-201ENST00000477654 SH3TC1Q8TE82 1336 aa13.71□□□□□ -0.21
RN7SL842P-201ENST00000477654 UTRNP46939 3433 aa13.71□□□□□ -0.21
RN7SL842P-201ENST00000477654 ALDH1L2Q3SY69 923 aa13.71□□□□□ -0.21
RN7SL842P-201ENST00000477654 CRY2Q49AN0 593 aa13.71□□□□□ -0.21
RN7SL842P-201ENST00000477654 OLFM4Q6UX06 510 aa13.71□□□□□ -0.21
RN7SL842P-201ENST00000477654 ZNF622Q969S3 477 aaKnown RBP eCLIP13.71□□□□□ -0.21
RN7SL842P-201ENST00000477654 YTHDC1Q96MU7 727 aaKnown RBP13.71□□□□□ -0.21
RN7SL842P-201ENST00000477654 RIC1Q4ADV7 1423 aa13.71□□□□□ -0.22
RN7SL842P-201ENST00000477654 DLEC1Q9Y238 1755 aa13.71□□□□□ -0.22
RN7SL842P-201ENST00000477654 CT47B1P0C2W7 299 aaPredicted RBP13.7□□□□□ -0.22
RN7SL842P-201ENST00000477654 CASP7P55210 303 aa13.7□□□□□ -0.22
RN7SL842P-201ENST00000477654 DALRD3Q5D0E6 543 aaKnown RBP13.7□□□□□ -0.22
RN7SL842P-201ENST00000477654 CCDC191Q8NCU4 936 aa13.7□□□□□ -0.22
RN7SL842P-201ENST00000477654 CWC25Q9NXE8 425 aaPredicted RBP13.7□□□□□ -0.22
RN7SL842P-201ENST00000477654 ZNF219Q9P2Y4 722 aaPredicted RBP13.7□□□□□ -0.22
RN7SL842P-201ENST00000477654 NOB1Q9ULX3 412 aaKnown RBP13.7□□□□□ -0.22
RN7SL842P-201ENST00000477654 DDX60Q8IY21 1712 aaKnown RBP13.7□□□□□ -0.22
RN7SL842P-201ENST00000477654 CACNA1FO60840 1977 aa13.69□□□□□ -0.22
RN7SL842P-201ENST00000477654 PCCAP05165 728 aaPredicted RBP13.69□□□□□ -0.22
RN7SL842P-201ENST00000477654 GCKRQ14397 625 aa13.69□□□□□ -0.22
RN7SL842P-201ENST00000477654 STYK1Q6J9G0 422 aa13.69□□□□□ -0.22
RN7SL842P-201ENST00000477654 TTLL6Q8N841 843 aa13.69□□□□□ -0.22
RN7SL842P-201ENST00000477654 ZBTB38Q8NAP3 1195 aaPredicted RBP13.69□□□□□ -0.22
RN7SL842P-201ENST00000477654 LINS1Q8NG48 757 aa13.69□□□□□ -0.22
RN7SL842P-201ENST00000477654 MASTLQ96GX5 879 aa13.69□□□□□ -0.22
RN7SL842P-201ENST00000477654 SLX4Q8IY92 1834 aa13.69□□□□□ -0.22
RN7SL842P-201ENST00000477654 H7C1W4 665 aa13.68□□□□□ -0.22
RN7SL842P-201ENST00000477654 IRS4O14654 1257 aaPredicted RBP13.68□□□□□ -0.22
RN7SL842P-201ENST00000477654 NPR1P16066 1061 aa13.68□□□□□ -0.22
RN7SL842P-201ENST00000477654 PRELPP51888 382 aa13.68□□□□□ -0.22
RN7SL842P-201ENST00000477654 BRPF1P55201 1214 aaPredicted RBP13.68□□□□□ -0.22
RN7SL842P-201ENST00000477654 PRPF40BQ6NWY9 871 aaKnown RBP13.68□□□□□ -0.22
RN7SL842P-201ENST00000477654 SLC4A10Q6U841 1118 aa13.68□□□□□ -0.22
RN7SL842P-201ENST00000477654 C7orf43Q8WVR3 580 aa13.68□□□□□ -0.22
RN7SL842P-201ENST00000477654 LAMB2P55268 1798 aa13.68□□□□□ -0.22
RN7SL842P-201ENST00000477654 RNF123Q5XPI4 1314 aa13.67□□□□□ -0.22
RN7SL842P-201ENST00000477654 HOXA10P31260 410 aaPredicted RBP13.67□□□□□ -0.22
RN7SL842P-201ENST00000477654 NEXNQ0ZGT2 675 aa13.67□□□□□ -0.22
RN7SL842P-201ENST00000477654 UBE3BQ7Z3V4 1068 aa13.67□□□□□ -0.22
RN7SL842P-201ENST00000477654 PTPRCP08575 1304 aa13.66□□□□□ -0.22
RN7SL842P-201ENST00000477654 C21orf2O43822 256 aa13.66□□□□□ -0.22
RN7SL842P-201ENST00000477654 EPHA10Q5JZY3 1008 aa13.66□□□□□ -0.22
RN7SL842P-201ENST00000477654 NLRP3Q96P20 1036 aa13.66□□□□□ -0.22
RN7SL842P-201ENST00000477654 CCDC85AQ96PX6 553 aaPredicted RBP13.66□□□□□ -0.22
RN7SL842P-201ENST00000477654 ABCC4O15439 1325 aa13.65□□□□□ -0.22
RN7SL842P-201ENST00000477654 NFKBIEO00221 500 aa13.65□□□□□ -0.22
RN7SL842P-201ENST00000477654 RASSF7Q02833 373 aa13.65□□□□□ -0.22
RN7SL842P-201ENST00000477654 SF3B3Q15393 1217 aaKnown RBP13.65□□□□□ -0.22
RN7SL842P-201ENST00000477654 CNKSR1Q969H4 720 aa13.65□□□□□ -0.22
RN7SL842P-201ENST00000477654 SEC31BQ9NQW1 1179 aa13.65□□□□□ -0.22
RN7SL842P-201ENST00000477654 PDZRN3Q9UPQ7 1066 aa13.65□□□□□ -0.22
RN7SL842P-201ENST00000477654 TAF1P21675 1872 aa13.65□□□□□ -0.22
RN7SL842P-201ENST00000477654 CDHR2Q9BYE9 1310 aa13.64□□□□□ -0.23
RN7SL842P-201ENST00000477654 SNED1Q8TER0 1413 aa13.64□□□□□ -0.23
RN7SL842P-201ENST00000477654 ARFGEF1Q9Y6D6 1849 aa13.64□□□□□ -0.23
RN7SL842P-201ENST00000477654 GRIN3BO60391 1043 aa13.64□□□□□ -0.23
RN7SL842P-201ENST00000477654 ARHGAP27Q6ZUM4 889 aa13.64□□□□□ -0.23
RN7SL842P-201ENST00000477654 RPGRQ92834 1020 aaKnown RBP13.64□□□□□ -0.23
RN7SL842P-201ENST00000477654 CELF1Q92879 486 aaKnown RBP13.64□□□□□ -0.23
RN7SL842P-201ENST00000477654 KAZALD1Q96I82 304 aa13.64□□□□□ -0.23
RN7SL842P-201ENST00000477654 CRAMP1Q96RY5 1269 aa13.64□□□□□ -0.23
RN7SL842P-201ENST00000477654 SRCIN1Q9C0H9 1055 aa13.64□□□□□ -0.23
RN7SL842P-201ENST00000477654 CACNA1SQ13698 1873 aa13.63□□□□□ -0.23
RN7SL842P-201ENST00000477654 ALDH1L1O75891 902 aa13.63□□□□□ -0.23
RN7SL842P-201ENST00000477654 NBPF7P0C2Y1 421 aaPredicted RBP13.63□□□□□ -0.23
RN7SL842P-201ENST00000477654 TRIM27P14373 513 aa13.63□□□□□ -0.23
RN7SL842P-201ENST00000477654 RBM17Q96I25 401 aaKnown RBP13.63□□□□□ -0.23
RN7SL842P-201ENST00000477654 GRM8O00222 908 aa13.62□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 14.7 ms