RNA–Protein interactions for RNA: ENST00000477572.1

VPS50-213, Transcript of VPS50, EARP/GARPII complex subunit, humanhuman

TSL 5

Gene VPS50, Length 504 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50-213ENST00000477572 QTRT2Q9H974 415 aaKnown RBP9.42□□□□□ -0.9
VPS50-213ENST00000477572 DGKGP49619 791 aa9.41□□□□□ -0.9
VPS50-213ENST00000477572 FKBP5Q13451 457 aaPredicted RBP9.41□□□□□ -0.9
VPS50-213ENST00000477572 ELOA3CA0A087WX78 387 aaPredicted RBP9.4□□□□□ -0.9
VPS50-213ENST00000477572 ELOA3DA6NLF2 546 aaPredicted RBP9.4□□□□□ -0.9
VPS50-213ENST00000477572 TGFBR3LH3BV60 316 aa9.4□□□□□ -0.9
VPS50-213ENST00000477572 FOXO3O43524 673 aa9.4□□□□□ -0.9
VPS50-213ENST00000477572 SIN3BO75182 1162 aa9.4□□□□□ -0.9
VPS50-213ENST00000477572 HIF1AQ16665 826 aa9.4□□□□□ -0.9
VPS50-213ENST00000477572 ELOA3BQ3SY89 546 aa9.4□□□□□ -0.9
VPS50-213ENST00000477572 ELOA3Q8NG57 546 aa9.4□□□□□ -0.9
VPS50-213ENST00000477572 DMGDHQ9UI17 866 aaKnown RBP9.4□□□□□ -0.9
VPS50-213ENST00000477572 ACIN1Q9UKV3 1341 aaKnown RBP9.39□□□□□ -0.91
VPS50-213ENST00000477572 ALAS2P22557 587 aa9.39□□□□□ -0.91
VPS50-213ENST00000477572 KCNQ4P56696 695 aa9.39□□□□□ -0.91
VPS50-213ENST00000477572 FAM69CQ0P6D2 419 aa9.39□□□□□ -0.91
VPS50-213ENST00000477572 NEUROD1Q13562 356 aa9.39□□□□□ -0.91
VPS50-213ENST00000477572 PLA2G4EQ3MJ16 856 aa9.39□□□□□ -0.91
VPS50-213ENST00000477572 KRBA1A5PL33 1030 aa9.38□□□□□ -0.91
VPS50-213ENST00000477572 GNB5O14775 395 aa9.38□□□□□ -0.91
VPS50-213ENST00000477572 IDH3AP50213 366 aa9.38□□□□□ -0.91
VPS50-213ENST00000477572 TMEM164Q5U3C3 297 aa9.38□□□□□ -0.91
VPS50-213ENST00000477572 MKNK1Q9BUB5 465 aa9.38□□□□□ -0.91
VPS50-213ENST00000477572 SERPINA10Q9UK55 444 aa9.38□□□□□ -0.91
VPS50-213ENST00000477572 LRFN2Q9ULH4 789 aa9.38□□□□□ -0.91
VPS50-213ENST00000477572 USP20Q9Y2K6 914 aa9.38□□□□□ -0.91
VPS50-213ENST00000477572 ITGB2P05107 769 aa9.37□□□□□ -0.91
VPS50-213ENST00000477572 GRNP28799 593 aaKnown RBP9.37□□□□□ -0.91
VPS50-213ENST00000477572 ADH7P40394 386 aa9.37□□□□□ -0.91
VPS50-213ENST00000477572 ELOAQ14241 798 aaKnown RBP9.37□□□□□ -0.91
VPS50-213ENST00000477572 OCLNQ16625 522 aa9.37□□□□□ -0.91
VPS50-213ENST00000477572 IER5Q5VY09 327 aa9.37□□□□□ -0.91
VPS50-213ENST00000477572 CAPN12Q6ZSI9 719 aa9.37□□□□□ -0.91
VPS50-213ENST00000477572 MDFIQ99750 246 aa9.37□□□□□ -0.91
VPS50-213ENST00000477572 ATG7O95352 703 aa9.36□□□□□ -0.91
VPS50-213ENST00000477572 SWI5Q1ZZU3 235 aa9.36□□□□□ -0.91
VPS50-213ENST00000477572 C11orf91Q3C1V1 193 aa9.36□□□□□ -0.91
VPS50-213ENST00000477572 C8orf86Q6ZUL3 223 aa9.36□□□□□ -0.91
VPS50-213ENST00000477572 KRT25Q7Z3Z0 450 aa9.36□□□□□ -0.91
VPS50-213ENST00000477572 PBXIP1Q96AQ6 731 aa9.36□□□□□ -0.91
VPS50-213ENST00000477572 IFT43Q96FT9 208 aa9.36□□□□□ -0.91
VPS50-213ENST00000477572 STARD13Q9Y3M8 1113 aa9.36□□□□□ -0.91
VPS50-213ENST00000477572 ADARB2-AS1A8MUL3 147 aa9.35□□□□□ -0.91
VPS50-213ENST00000477572 M0R082 166 aa9.35□□□□□ -0.91
VPS50-213ENST00000477572 MICAL2O94851 1124 aa9.35□□□□□ -0.91
VPS50-213ENST00000477572 NFKB1P19838 968 aa9.35□□□□□ -0.91
VPS50-213ENST00000477572 INPP5BP32019 993 aa9.35□□□□□ -0.91
VPS50-213ENST00000477572 COX20Q5RI15 118 aa9.35□□□□□ -0.91
VPS50-213ENST00000477572 C14orf37Q86TY3 774 aa9.35□□□□□ -0.91
VPS50-213ENST00000477572 CCDC82Q8N4S0 544 aa9.35□□□□□ -0.91
VPS50-213ENST00000477572 ZNF417Q8TAU3 575 aa9.35□□□□□ -0.91
VPS50-213ENST00000477572 TNFRSF25Q93038 417 aa9.35□□□□□ -0.91
VPS50-213ENST00000477572 TRIM11Q96F44 468 aa9.35□□□□□ -0.91
VPS50-213ENST00000477572 PNMA5Q96PV4 448 aa9.35□□□□□ -0.91
VPS50-213ENST00000477572 ZNF587Q96SQ5 575 aaPredicted RBP9.35□□□□□ -0.91
VPS50-213ENST00000477572 GSX2Q9BZM3 304 aa9.35□□□□□ -0.91
VPS50-213ENST00000477572 UBE2OQ9C0C9 1292 aaKnown RBP9.35□□□□□ -0.91
VPS50-213ENST00000477572 SAP130Q9H0E3 1048 aa9.35□□□□□ -0.91
VPS50-213ENST00000477572 ALBP02768 609 aa9.34□□□□□ -0.91
VPS50-213ENST00000477572 NAA30Q147X3 362 aaPredicted RBP9.34□□□□□ -0.91
VPS50-213ENST00000477572 MYO19Q96H55 970 aa9.34□□□□□ -0.91
VPS50-213ENST00000477572 PLVAPQ9BX97 442 aa9.34□□□□□ -0.91
VPS50-213ENST00000477572 CCINQ13939 588 aa9.33□□□□□ -0.92
VPS50-213ENST00000477572 C1orf115Q9H7X2 142 aa9.33□□□□□ -0.92
VPS50-213ENST00000477572 UTP3Q9NQZ2 479 aaKnown RBP eCLIP9.33□□□□□ -0.92
VPS50-213ENST00000477572 GTF3C5Q9Y5Q8 519 aaPredicted RBP9.33□□□□□ -0.92
VPS50-213ENST00000477572 ARSDP51689 593 aa9.32□□□□□ -0.92
VPS50-213ENST00000477572 SPOCK3Q9BQ16 436 aa9.32□□□□□ -0.92
VPS50-213ENST00000477572 SLAIN2Q9P270 581 aa9.32□□□□□ -0.92
VPS50-213ENST00000477572 PIK3R2O00459 728 aa9.31□□□□□ -0.92
VPS50-213ENST00000477572 MSTNO14793 375 aa9.31□□□□□ -0.92
VPS50-213ENST00000477572 OPLAHO14841 1288 aa9.31□□□□□ -0.92
VPS50-213ENST00000477572 SASH3O75995 380 aa9.31□□□□□ -0.92
VPS50-213ENST00000477572 EPB42P16452 691 aa9.31□□□□□ -0.92
VPS50-213ENST00000477572 TARSP26639 723 aaKnown RBP9.31□□□□□ -0.92
VPS50-213ENST00000477572 TREML1Q86YW5 311 aa9.31□□□□□ -0.92
VPS50-213ENST00000477572 RGL4Q8IZJ4 473 aa9.31□□□□□ -0.92
VPS50-213ENST00000477572 MICALL1Q8N3F8 863 aa9.31□□□□□ -0.92
VPS50-213ENST00000477572 DNAJB12Q9NXW2 375 aaKnown RBP9.31□□□□□ -0.92
VPS50-213ENST00000477572 CXXC1Q9P0U4 656 aaPredicted RBP9.31□□□□□ -0.92
VPS50-213ENST00000477572 FAM26DQ5JW98 314 aa9.3□□□□□ -0.92
VPS50-213ENST00000477572 CMTR1Q8N1G2 835 aaKnown RBP9.3□□□□□ -0.92
VPS50-213ENST00000477572 NUDT8Q8WV74 236 aa9.3□□□□□ -0.92
VPS50-213ENST00000477572 NOP53Q9NZM5 478 aaKnown RBP9.3□□□□□ -0.92
VPS50-213ENST00000477572 ZFATQ9P243 1243 aa9.3□□□□□ -0.92
VPS50-213ENST00000477572 SLC6A14Q9UN76 642 aa9.3□□□□□ -0.92
VPS50-213ENST00000477572 RTCBQ9Y3I0 505 aaKnown RBP9.3□□□□□ -0.92
VPS50-213ENST00000477572 FAM229AH3BQW9 127 aa9.29□□□□□ -0.92
VPS50-213ENST00000477572 IGHA1P01876 353 aa9.29□□□□□ -0.92
VPS50-213ENST00000477572 C16orf46Q6P387 395 aa9.29□□□□□ -0.92
VPS50-213ENST00000477572 ETFBKMTQ8IXQ9 262 aa9.29□□□□□ -0.92
VPS50-213ENST00000477572 MLLT1Q03111 559 aaPredicted RBP9.28□□□□□ -0.92
VPS50-213ENST00000477572 C1QTNF9BB2RNN3 333 aa9.27□□□□□ -0.93
VPS50-213ENST00000477572 PROCP04070 461 aa9.27□□□□□ -0.93
VPS50-213ENST00000477572 SCNN1AP37088 669 aa9.27□□□□□ -0.93
VPS50-213ENST00000477572 COL9A3Q14050 684 aaPredicted RBP9.27□□□□□ -0.93
VPS50-213ENST00000477572 C20orf204Q6ZNR8 217 aa9.27□□□□□ -0.93
VPS50-213ENST00000477572 CLP1Q92989 425 aaKnown RBP9.27□□□□□ -0.93
VPS50-213ENST00000477572 NAGPAQ9UK23 515 aa9.27□□□□□ -0.93
VPS50-213ENST00000477572 RARAP10276 462 aa9.26□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms