RNA–Protein interactions for RNA: ENST00000477558.1

VPS45-207, Transcript of vacuolar protein sorting 45 homolog, humanhuman

TSL 2

Gene VPS45, Length 1,425 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS45-207ENST00000477558 USP3Q9Y6I4 520 aa8.1□□□□□ -1.11
VPS45-207ENST00000477558 A6NJY4 79 aa8.09□□□□□ -1.11
VPS45-207ENST00000477558 EPHA4P54764 986 aa8.09□□□□□ -1.11
VPS45-207ENST00000477558 SLC27A3Q5K4L6 730 aa8.09□□□□□ -1.11
VPS45-207ENST00000477558 PRICKLE2Q7Z3G6 844 aa8.09□□□□□ -1.11
VPS45-207ENST00000477558 NPAS3Q8IXF0 933 aa8.09□□□□□ -1.11
VPS45-207ENST00000477558 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP8.08□□□□□ -1.12
VPS45-207ENST00000477558 TMEM88BA6NKF7 163 aa8.08□□□□□ -1.12
VPS45-207ENST00000477558 M0R2N6 131 aa8.08□□□□□ -1.12
VPS45-207ENST00000477558 CSB-PGBD3P0DP91 1061 aa8.08□□□□□ -1.12
VPS45-207ENST00000477558 MTFR1Q15390 333 aa8.08□□□□□ -1.12
VPS45-207ENST00000477558 ZSCAN10Q96SZ4 725 aaPredicted RBP8.08□□□□□ -1.12
VPS45-207ENST00000477558 SLAIN2Q9P270 581 aa8.08□□□□□ -1.12
VPS45-207ENST00000477558 DNMT3LQ9UJW3 386 aa8.08□□□□□ -1.12
VPS45-207ENST00000477558 MADDQ8WXG6 1647 aa8.07□□□□□ -1.12
VPS45-207ENST00000477558 GPC1P35052 558 aa8.07□□□□□ -1.12
VPS45-207ENST00000477558 POU4F2Q12837 409 aa8.07□□□□□ -1.12
VPS45-207ENST00000477558 SCHIP1Q9P0W5 487 aaPredicted RBP8.07□□□□□ -1.12
VPS45-207ENST00000477558 ABCC5O15440 1437 aa8.07□□□□□ -1.12
VPS45-207ENST00000477558 RRBP1Q9P2E9 1410 aaKnown RBP8.07□□□□□ -1.12
VPS45-207ENST00000477558 ADGRL2O95490 1459 aa8.07□□□□□ -1.12
VPS45-207ENST00000477558 EIF2AK4Q9P2K8 1649 aaKnown RBP8.07□□□□□ -1.12
VPS45-207ENST00000477558 FAM135AQ9P2D6 1515 aa8.06□□□□□ -1.12
VPS45-207ENST00000477558 CDK2AP1O14519 115 aa8.06□□□□□ -1.12
VPS45-207ENST00000477558 GMPRP36959 345 aa8.06□□□□□ -1.12
VPS45-207ENST00000477558 HNRNPMP52272 730 aaKnown RBP eCLIP8.06□□□□□ -1.12
VPS45-207ENST00000477558 DAPK1P53355 1430 aa8.06□□□□□ -1.12
VPS45-207ENST00000477558 FOXK2Q01167 660 aa8.06□□□□□ -1.12
VPS45-207ENST00000477558 TMEM214Q6NUQ4 689 aaKnown RBP8.06□□□□□ -1.12
VPS45-207ENST00000477558 PPARGC1BQ86YN6 1023 aaKnown RBP8.06□□□□□ -1.12
VPS45-207ENST00000477558 IRF7Q92985 503 aa8.06□□□□□ -1.12
VPS45-207ENST00000477558 PRIMPOLQ96LW4 560 aa8.06□□□□□ -1.12
VPS45-207ENST00000477558 TSPAN10Q9H1Z9 355 aaPredicted RBP8.06□□□□□ -1.12
VPS45-207ENST00000477558 IQSEC3Q9UPP2 1182 aaPredicted RBP8.06□□□□□ -1.12
VPS45-207ENST00000477558 FER1L4A9Z1Z3 1794 aa8.06□□□□□ -1.12
VPS45-207ENST00000477558 RNF17Q9BXT8 1623 aaKnown RBP8.06□□□□□ -1.12
VPS45-207ENST00000477558 A2MP01023 1474 aa8.06□□□□□ -1.12
VPS45-207ENST00000477558 MAN1A2O60476 641 aa8.05□□□□□ -1.12
VPS45-207ENST00000477558 RHOQP17081 205 aa8.05□□□□□ -1.12
VPS45-207ENST00000477558 LYSMD3Q7Z3D4 306 aa8.05□□□□□ -1.12
VPS45-207ENST00000477558 ZSCAN1Q8NBB4 408 aa8.05□□□□□ -1.12
VPS45-207ENST00000477558 DEPDC5O75140 1603 aa8.05□□□□□ -1.12
VPS45-207ENST00000477558 MROH1Q8NDA8 1641 aa8.05□□□□□ -1.12
VPS45-207ENST00000477558 C21orf2O43822 256 aa8.04□□□□□ -1.12
VPS45-207ENST00000477558 PRMT3O60678 531 aa8.04□□□□□ -1.12
VPS45-207ENST00000477558 PHKA2P46019 1235 aa8.04□□□□□ -1.12
VPS45-207ENST00000477558 SLC9A9Q8IVB4 645 aa8.04□□□□□ -1.12
VPS45-207ENST00000477558 SCG3Q8WXD2 468 aaKnown RBP8.04□□□□□ -1.12
VPS45-207ENST00000477558 PARP3Q9Y6F1 533 aa8.04□□□□□ -1.12
VPS45-207ENST00000477558 MROH2AA6NES4 1674 aa8.04□□□□□ -1.12
VPS45-207ENST00000477558 SPAG9O60271 1321 aaKnown RBP8.04□□□□□ -1.12
VPS45-207ENST00000477558 ATAD2Q6PL18 1390 aa8.04□□□□□ -1.12
VPS45-207ENST00000477558 LORP23490 312 aaPredicted RBP8.03□□□□□ -1.12
VPS45-207ENST00000477558 C4orf17Q53FE4 359 aa8.03□□□□□ -1.12
VPS45-207ENST00000477558 ZNF295-AS1Q8N0V1 137 aa8.03□□□□□ -1.12
VPS45-207ENST00000477558 RIMS1Q86UR5 1692 aaKnown RBP8.03□□□□□ -1.12
VPS45-207ENST00000477558 PRDM15P57071 1507 aaPredicted RBP8.03□□□□□ -1.12
VPS45-207ENST00000477558 DUOX2Q9NRD8 1548 aa8.03□□□□□ -1.12
VPS45-207ENST00000477558 SPATA31C2B4DYI2 1134 aa8.03□□□□□ -1.12
VPS45-207ENST00000477558 H3BM21 787 aa8.03□□□□□ -1.12
VPS45-207ENST00000477558 SWI5Q1ZZU3 235 aa8.03□□□□□ -1.12
VPS45-207ENST00000477558 ZNF800Q2TB10 664 aaPredicted RBP eCLIP8.03□□□□□ -1.12
VPS45-207ENST00000477558 NBPF10Q6P3W6 841 aaKnown RBP8.03□□□□□ -1.12
VPS45-207ENST00000477558 NBPF15Q8N660 670 aa8.03□□□□□ -1.12
VPS45-207ENST00000477558 CABP1Q9NZU7 370 aa8.03□□□□□ -1.12
VPS45-207ENST00000477558 PTPRKQ15262 1439 aa8.02□□□□□ -1.13
VPS45-207ENST00000477558 PTPRMP28827 1452 aa8.02□□□□□ -1.13
VPS45-207ENST00000477558 GTF2E1P29083 439 aaPredicted RBP8.02□□□□□ -1.13
VPS45-207ENST00000477558 WEE1P30291 646 aa8.02□□□□□ -1.13
VPS45-207ENST00000477558 SH3PXD2AQ5TCZ1 1133 aa8.02□□□□□ -1.13
VPS45-207ENST00000477558 RHBDD1Q8TEB9 315 aa8.02□□□□□ -1.13
VPS45-207ENST00000477558 ZDHHC1Q8WTX9 485 aa8.02□□□□□ -1.13
VPS45-207ENST00000477558 CLP1Q92989 425 aaKnown RBP8.02□□□□□ -1.13
VPS45-207ENST00000477558 DHX29Q7Z478 1369 aaKnown RBP8.01□□□□□ -1.13
VPS45-207ENST00000477558 NCOA1Q15788 1441 aa8.01□□□□□ -1.13
VPS45-207ENST00000477558 ERBINQ96RT1 1412 aa8.01□□□□□ -1.13
VPS45-207ENST00000477558 KDM5DQ9BY66 1539 aa8.01□□□□□ -1.13
VPS45-207ENST00000477558 ZC3H13Q5T200 1668 aaKnown RBP8.01□□□□□ -1.13
VPS45-207ENST00000477558 PPP1R12BO60237 982 aaPredicted RBP8.01□□□□□ -1.13
VPS45-207ENST00000477558 OCLNQ16625 522 aa8.01□□□□□ -1.13
VPS45-207ENST00000477558 GNASQ5JWF2 1037 aa8.01□□□□□ -1.13
VPS45-207ENST00000477558 TAS1R3Q7RTX0 852 aa8.01□□□□□ -1.13
VPS45-207ENST00000477558 NIFKQ9BYG3 293 aaKnown RBP8.01□□□□□ -1.13
VPS45-207ENST00000477558 USTQ9Y2C2 406 aa8.01□□□□□ -1.13
VPS45-207ENST00000477558 VWDEQ8N2E2 1590 aa8□□□□□ -1.13
VPS45-207ENST00000477558 C3P01024 1663 aa8□□□□□ -1.13
VPS45-207ENST00000477558 SENP3-EIF4A1A0A087X0R7 540 aa8□□□□□ -1.13
VPS45-207ENST00000477558 SCNN1AP37088 669 aa8□□□□□ -1.13
VPS45-207ENST00000477558 PTSQ03393 145 aa8□□□□□ -1.13
VPS45-207ENST00000477558 ROCK1Q13464 1354 aa8□□□□□ -1.13
VPS45-207ENST00000477558 IGFBP4P22692 258 aa7.99□□□□□ -1.13
VPS45-207ENST00000477558 NOS2P35228 1153 aa7.99□□□□□ -1.13
VPS45-207ENST00000477558 PLA2G4AP47712 749 aa7.99□□□□□ -1.13
VPS45-207ENST00000477558 VEGFBP49765 207 aa7.99□□□□□ -1.13
VPS45-207ENST00000477558 TEAD4Q15561 434 aa7.99□□□□□ -1.13
VPS45-207ENST00000477558 L3MBTL2Q969R5 705 aa7.99□□□□□ -1.13
VPS45-207ENST00000477558 KIF15Q9NS87 1388 aa7.99□□□□□ -1.13
VPS45-207ENST00000477558 CNTLNQ9NXG0 1405 aa7.99□□□□□ -1.13
VPS45-207ENST00000477558 CLTCQ00610 1675 aaKnown RBP7.98□□□□□ -1.13
VPS45-207ENST00000477558 GCC2Q8IWJ2 1684 aa7.98□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 12 ms