RNA–Protein interactions for RNA: ENST00000477541.1

HLA-DMA-208, Transcript of major histocompatibility complex, class II, DM alpha, humanhuman

Gene HLA-DMA, Length 1,735 nt, Biotype retained intron.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DMA-208ENST00000477541 GIGYF1O75420 1035 aaPredicted RBP16.08■□□□□ 0.16
HLA-DMA-208ENST00000477541 KCNA6P17658 529 aa16.08■□□□□ 0.16
HLA-DMA-208ENST00000477541 GIMAP6Q6P9H5 292 aa16.08■□□□□ 0.16
HLA-DMA-208ENST00000477541 FEZ1Q99689 392 aa16.08■□□□□ 0.16
HLA-DMA-208ENST00000477541 HMG20BQ9P0W2 317 aa16.08■□□□□ 0.16
HLA-DMA-208ENST00000477541 EID1Q9Y6B2 187 aa16.08■□□□□ 0.16
HLA-DMA-208ENST00000477541 LRP6O75581 1613 aa16.07■□□□□ 0.16
HLA-DMA-208ENST00000477541 CDC25BP30305 580 aa16.07■□□□□ 0.16
HLA-DMA-208ENST00000477541 BCL2L12Q9HB09 334 aa16.07■□□□□ 0.16
HLA-DMA-208ENST00000477541 RGPD8O14715 1765 aaPredicted RBP16.07■□□□□ 0.16
HLA-DMA-208ENST00000477541 PDCL2Q8N4E4 241 aa16.06■□□□□ 0.16
HLA-DMA-208ENST00000477541 NGDNQ8NEJ9 315 aaKnown RBP16.06■□□□□ 0.16
HLA-DMA-208ENST00000477541 ZNF830Q96NB3 372 aaPredicted RBP16.06■□□□□ 0.16
HLA-DMA-208ENST00000477541 KCNF1Q9H3M0 494 aa16.06■□□□□ 0.16
HLA-DMA-208ENST00000477541 COL16A1Q07092 1604 aaPredicted RBP16.06■□□□□ 0.16
HLA-DMA-208ENST00000477541 KIF20AO95235 890 aa16.05■□□□□ 0.16
HLA-DMA-208ENST00000477541 EIF4A1P60842 406 aaKnown RBP16.05■□□□□ 0.16
HLA-DMA-208ENST00000477541 TYRO3Q06418 890 aa16.05■□□□□ 0.16
HLA-DMA-208ENST00000477541 OS9Q13438 667 aaPredicted RBP16.05■□□□□ 0.16
HLA-DMA-208ENST00000477541 TSGA10IPQ3SY00 556 aa16.05■□□□□ 0.16
HLA-DMA-208ENST00000477541 LARP1BQ659C4 914 aaKnown RBP16.05■□□□□ 0.16
HLA-DMA-208ENST00000477541 TDRD7Q8NHU6 1098 aaKnown RBP16.05■□□□□ 0.16
HLA-DMA-208ENST00000477541 MAP4K1Q92918 833 aa16.05■□□□□ 0.16
HLA-DMA-208ENST00000477541 TBX22Q9Y458 520 aa16.05■□□□□ 0.16
HLA-DMA-208ENST00000477541 RFX7Q2KHR2 1363 aa16.05■□□□□ 0.16
HLA-DMA-208ENST00000477541 NEMFO60524 1076 aa16.05■□□□□ 0.16
HLA-DMA-208ENST00000477541 LARGE1O95461 756 aa16.05■□□□□ 0.16
HLA-DMA-208ENST00000477541 RXRBP28702 533 aa16.05■□□□□ 0.16
HLA-DMA-208ENST00000477541 PRPF40BQ6NWY9 871 aaKnown RBP16.05■□□□□ 0.16
HLA-DMA-208ENST00000477541 SPG7Q9UQ90 795 aa16.05■□□□□ 0.16
HLA-DMA-208ENST00000477541 PAXBP1Q9Y5B6 917 aa16.05■□□□□ 0.16
HLA-DMA-208ENST00000477541 LTN1O94822 1766 aa16.04■□□□□ 0.16
HLA-DMA-208ENST00000477541 MRC1P22897 1456 aa16.04■□□□□ 0.16
HLA-DMA-208ENST00000477541 VPS37CA5D8V6 355 aaPredicted RBP16.04■□□□□ 0.16
HLA-DMA-208ENST00000477541 SMTNL1A8MU46 457 aa16.04■□□□□ 0.16
HLA-DMA-208ENST00000477541 MAP4K4O95819 1239 aaPredicted RBP16.04■□□□□ 0.16
HLA-DMA-208ENST00000477541 IFIT2P09913 472 aaKnown RBP16.04■□□□□ 0.16
HLA-DMA-208ENST00000477541 ME3Q16798 604 aa16.04■□□□□ 0.16
HLA-DMA-208ENST00000477541 CREB3L3Q68CJ9 461 aa16.04■□□□□ 0.16
HLA-DMA-208ENST00000477541 PROSER2Q86WR7 435 aaPredicted RBP16.04■□□□□ 0.16
HLA-DMA-208ENST00000477541 CLSTN2Q9H4D0 955 aa16.04■□□□□ 0.16
HLA-DMA-208ENST00000477541 PHAXQ9H814 394 aaKnown RBP16.04■□□□□ 0.16
HLA-DMA-208ENST00000477541 SLAIN2Q9P270 581 aa16.04■□□□□ 0.16
HLA-DMA-208ENST00000477541 MRVI1Q9Y6F6 885 aa16.04■□□□□ 0.16
HLA-DMA-208ENST00000477541 GOLGA6L4A6NEF3 574 aa16.03■□□□□ 0.16
HLA-DMA-208ENST00000477541 NBPF7P0C2Y1 421 aaPredicted RBP16.03■□□□□ 0.16
HLA-DMA-208ENST00000477541 ZSCAN20P17040 1043 aaPredicted RBP16.03■□□□□ 0.16
HLA-DMA-208ENST00000477541 KRT32Q14532 448 aa16.03■□□□□ 0.16
HLA-DMA-208ENST00000477541 TTC6Q86TZ1 520 aa16.03■□□□□ 0.16
HLA-DMA-208ENST00000477541 TNMDQ9H2S6 317 aa16.03■□□□□ 0.16
HLA-DMA-208ENST00000477541 PYCARDQ9ULZ3 195 aa16.03■□□□□ 0.16
HLA-DMA-208ENST00000477541 RBM8AQ9Y5S9 174 aaKnown RBP16.03■□□□□ 0.16
HLA-DMA-208ENST00000477541 RIOK3O14730 519 aaKnown RBP16.02■□□□□ 0.16
HLA-DMA-208ENST00000477541 PTH1RQ03431 593 aa16.02■□□□□ 0.16
HLA-DMA-208ENST00000477541 ST3GAL1Q11201 340 aa16.02■□□□□ 0.16
HLA-DMA-208ENST00000477541 PLA2G4DQ86XP0 818 aa16.02■□□□□ 0.16
HLA-DMA-208ENST00000477541 DBF4Q9UBU7 674 aaPredicted RBP16.02■□□□□ 0.16
HLA-DMA-208ENST00000477541 UTYO14607 1347 aa16.02■□□□□ 0.16
HLA-DMA-208ENST00000477541 ADCY9O60503 1353 aa16.02■□□□□ 0.16
HLA-DMA-208ENST00000477541 AP5Z1O43299 807 aa16.02■□□□□ 0.15
HLA-DMA-208ENST00000477541 PPP4R3BQ5MIZ7 849 aa16.02■□□□□ 0.15
HLA-DMA-208ENST00000477541 MEX3CQ5U5Q3 659 aaKnown RBP16.02■□□□□ 0.15
HLA-DMA-208ENST00000477541 BLOC1S2Q6QNY1 142 aa16.02■□□□□ 0.15
HLA-DMA-208ENST00000477541 TICAM2Q86XR7 235 aa16.02■□□□□ 0.15
HLA-DMA-208ENST00000477541 NECTIN2Q92692 538 aa16.02■□□□□ 0.15
HLA-DMA-208ENST00000477541 MED23Q9ULK4 1368 aa16.01■□□□□ 0.15
HLA-DMA-208ENST00000477541 PI4KAP2A4QPH2 592 aa16.01■□□□□ 0.15
HLA-DMA-208ENST00000477541 CTAGE5O15320 804 aa16.01■□□□□ 0.15
HLA-DMA-208ENST00000477541 ZNF75DP51815 510 aa16.01■□□□□ 0.15
HLA-DMA-208ENST00000477541 NLRP6P59044 892 aa16.01■□□□□ 0.15
HLA-DMA-208ENST00000477541 ADCK5Q3MIX3 580 aa16.01■□□□□ 0.15
HLA-DMA-208ENST00000477541 SARM1Q6SZW1 724 aa16.01■□□□□ 0.15
HLA-DMA-208ENST00000477541 PI4KAP1Q8N8J0 262 aa16.01■□□□□ 0.15
HLA-DMA-208ENST00000477541 ZSCAN16Q9H4T2 348 aaPredicted RBP16.01■□□□□ 0.15
HLA-DMA-208ENST00000477541 MYH15Q9Y2K3 1946 aa16.01■□□□□ 0.15
HLA-DMA-208ENST00000477541 SLC27A2O14975 620 aa16■□□□□ 0.15
HLA-DMA-208ENST00000477541 SOX12O15370 315 aa16■□□□□ 0.15
HLA-DMA-208ENST00000477541 RPS6KB1P23443 525 aa16■□□□□ 0.15
HLA-DMA-208ENST00000477541 KCNJ4P48050 445 aa16■□□□□ 0.15
HLA-DMA-208ENST00000477541 PLCB2Q00722 1185 aa16■□□□□ 0.15
HLA-DMA-208ENST00000477541 SPATA32Q96LK8 384 aa16■□□□□ 0.15
HLA-DMA-208ENST00000477541 TPCN1Q9ULQ1 816 aa16■□□□□ 0.15
HLA-DMA-208ENST00000477541 DHX8Q14562 1220 aaKnown RBP15.99■□□□□ 0.15
HLA-DMA-208ENST00000477541 ATL3Q6DD88 541 aa15.99■□□□□ 0.15
HLA-DMA-208ENST00000477541 CBX8Q9HC52 389 aa15.99■□□□□ 0.15
HLA-DMA-208ENST00000477541 CHPF2Q9P2E5 772 aa15.99■□□□□ 0.15
HLA-DMA-208ENST00000477541 CGNQ9P2M7 1197 aaKnown RBP15.99■□□□□ 0.15
HLA-DMA-208ENST00000477541 AMOTL2Q9Y2J4 779 aa15.99■□□□□ 0.15
HLA-DMA-208ENST00000477541 KSR2Q6VAB6 950 aa15.99■□□□□ 0.15
HLA-DMA-208ENST00000477541 C17orf53Q8N3J3 647 aaPredicted RBP15.99■□□□□ 0.15
HLA-DMA-208ENST00000477541 LEO1Q8WVC0 666 aaPredicted RBP15.99■□□□□ 0.15
HLA-DMA-208ENST00000477541 CHMP4CQ96CF2 233 aa15.99■□□□□ 0.15
HLA-DMA-208ENST00000477541 CFAP45Q9UL16 551 aa15.99■□□□□ 0.15
HLA-DMA-208ENST00000477541 HEG1Q9ULI3 1381 aa15.98■□□□□ 0.15
HLA-DMA-208ENST00000477541 NFAT5O94916 1531 aa15.98■□□□□ 0.15
HLA-DMA-208ENST00000477541 AKAP4Q5JQC9 854 aa15.98■□□□□ 0.15
HLA-DMA-208ENST00000477541 CDC37L1Q7L3B6 337 aa15.98■□□□□ 0.15
HLA-DMA-208ENST00000477541 KCND1Q9NSA2 647 aa15.98■□□□□ 0.15
HLA-DMA-208ENST00000477541 C9orf78Q9NZ63 289 aaPredicted RBP15.98■□□□□ 0.15
HLA-DMA-208ENST00000477541 OGFRQ9NZT2 677 aa15.98■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 18.4 ms