RNA–Protein interactions for RNA: ENST00000476964.5

SOX2-OT-207, SOX2 overlapping transcript, humanhuman

TSL 1 (best) BASIC

Gene SOX2-OT, Length 606 nt, Biotype sense overlapping.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOX2-OT-207ENST00000476964 RETREG2Q8NC44 543 aa8.67□□□□□ -1.02
SOX2-OT-207ENST00000476964 SEPT3Q9UH03 358 aa8.67□□□□□ -1.02
SOX2-OT-207ENST00000476964 BRD2P25440 801 aaKnown RBP8.66□□□□□ -1.02
SOX2-OT-207ENST00000476964 SCNN1AP37088 669 aa8.66□□□□□ -1.02
SOX2-OT-207ENST00000476964 FAM26DQ5JW98 314 aa8.66□□□□□ -1.02
SOX2-OT-207ENST00000476964 ETFBKMTQ8IXQ9 262 aa8.66□□□□□ -1.02
SOX2-OT-207ENST00000476964 GOLGA6L1Q8N7Z2 621 aa8.66□□□□□ -1.02
SOX2-OT-207ENST00000476964 SLC30A3Q99726 388 aa8.66□□□□□ -1.02
SOX2-OT-207ENST00000476964 FAM181BA6NEQ2 426 aa8.65□□□□□ -1.02
SOX2-OT-207ENST00000476964 IDH3AP50213 366 aa8.65□□□□□ -1.02
SOX2-OT-207ENST00000476964 PDE4CQ08493 712 aa8.65□□□□□ -1.02
SOX2-OT-207ENST00000476964 SVOPQ8N4V2 548 aa8.65□□□□□ -1.02
SOX2-OT-207ENST00000476964 MDFIQ99750 246 aa8.65□□□□□ -1.02
SOX2-OT-207ENST00000476964 EFCC1Q9HA90 598 aa8.65□□□□□ -1.02
SOX2-OT-207ENST00000476964 GGA1Q9UJY5 639 aa8.65□□□□□ -1.02
SOX2-OT-207ENST00000476964 SPEM2Q0P670 501 aa8.64□□□□□ -1.03
SOX2-OT-207ENST00000476964 SLCO4C1Q6ZQN7 724 aa8.64□□□□□ -1.03
SOX2-OT-207ENST00000476964 TREML1Q86YW5 311 aa8.64□□□□□ -1.03
SOX2-OT-207ENST00000476964 STIM2Q9P246 746 aa8.64□□□□□ -1.03
SOX2-OT-207ENST00000476964 ADH6P28332 368 aa8.63□□□□□ -1.03
SOX2-OT-207ENST00000476964 ARSDP51689 593 aa8.63□□□□□ -1.03
SOX2-OT-207ENST00000476964 GSX2Q9BZM3 304 aa8.63□□□□□ -1.03
SOX2-OT-207ENST00000476964 PRR12Q9ULL5 1215 aa8.63□□□□□ -1.03
SOX2-OT-207ENST00000476964 ADAMTS8Q9UP79 889 aa8.63□□□□□ -1.03
SOX2-OT-207ENST00000476964 SIN3BO75182 1162 aa8.62□□□□□ -1.03
SOX2-OT-207ENST00000476964 EPXP11678 715 aa8.62□□□□□ -1.03
SOX2-OT-207ENST00000476964 SYT9Q86SS6 491 aa8.62□□□□□ -1.03
SOX2-OT-207ENST00000476964 FCHSD1Q86WN1 690 aa8.62□□□□□ -1.03
SOX2-OT-207ENST00000476964 GALNT6Q8NCL4 622 aa8.62□□□□□ -1.03
SOX2-OT-207ENST00000476964 EDARADDQ8WWZ3 215 aa8.62□□□□□ -1.03
SOX2-OT-207ENST00000476964 ENAMQ9NRM1 1142 aa8.62□□□□□ -1.03
SOX2-OT-207ENST00000476964 DNMT3AQ9Y6K1 912 aaPredicted RBP8.62□□□□□ -1.03
SOX2-OT-207ENST00000476964 NEURL1BA8MQ27 555 aa8.61□□□□□ -1.03
SOX2-OT-207ENST00000476964 SHISA8B8ZZ34 492 aa8.61□□□□□ -1.03
SOX2-OT-207ENST00000476964 ZBTB39O15060 712 aa8.61□□□□□ -1.03
SOX2-OT-207ENST00000476964 EGFRP00533 1210 aa8.61□□□□□ -1.03
SOX2-OT-207ENST00000476964 EPB42P16452 691 aa8.61□□□□□ -1.03
SOX2-OT-207ENST00000476964 NPR3P17342 541 aa8.61□□□□□ -1.03
SOX2-OT-207ENST00000476964 PCBP4P57723 403 aaKnown RBP8.61□□□□□ -1.03
SOX2-OT-207ENST00000476964 MAP3K10Q02779 954 aa8.61□□□□□ -1.03
SOX2-OT-207ENST00000476964 HELQQ8TDG4 1101 aa8.61□□□□□ -1.03
SOX2-OT-207ENST00000476964 GTF3C2Q8WUA4 911 aaPredicted RBP8.61□□□□□ -1.03
SOX2-OT-207ENST00000476964 ADARB2-AS1A8MUL3 147 aa8.6□□□□□ -1.03
SOX2-OT-207ENST00000476964 CCINQ13939 588 aa8.6□□□□□ -1.03
SOX2-OT-207ENST00000476964 B4GALNT3Q6L9W6 998 aa8.6□□□□□ -1.03
SOX2-OT-207ENST00000476964 TNFRSF25Q93038 417 aa8.6□□□□□ -1.03
SOX2-OT-207ENST00000476964 RTCBQ9Y3I0 505 aaKnown RBP8.6□□□□□ -1.03
SOX2-OT-207ENST00000476964 HOXB4P17483 251 aaPredicted RBP8.59□□□□□ -1.03
SOX2-OT-207ENST00000476964 BTBD6Q96KE9 485 aa8.59□□□□□ -1.03
SOX2-OT-207ENST00000476964 KCNMB2Q9Y691 235 aa8.59□□□□□ -1.03
SOX2-OT-207ENST00000476964 ARID4AP29374 1257 aaPredicted RBP8.58□□□□□ -1.04
SOX2-OT-207ENST00000476964 NEUROD1Q13562 356 aa8.58□□□□□ -1.04
SOX2-OT-207ENST00000476964 TXNDC2Q86VQ3 553 aa8.58□□□□□ -1.04
SOX2-OT-207ENST00000476964 ABTB2Q8N961 1025 aa8.58□□□□□ -1.04
SOX2-OT-207ENST00000476964 ELOA3CA0A087WX78 387 aaPredicted RBP8.57□□□□□ -1.04
SOX2-OT-207ENST00000476964 ELOA3DA6NLF2 546 aaPredicted RBP8.57□□□□□ -1.04
SOX2-OT-207ENST00000476964 ZAP70P43403 619 aa8.57□□□□□ -1.04
SOX2-OT-207ENST00000476964 ELOA3BQ3SY89 546 aa8.57□□□□□ -1.04
SOX2-OT-207ENST00000476964 RAB44Q7Z6P3 723 aaPredicted RBP8.57□□□□□ -1.04
SOX2-OT-207ENST00000476964 ELOA3Q8NG57 546 aa8.57□□□□□ -1.04
SOX2-OT-207ENST00000476964 MTMR7Q9Y216 660 aa8.57□□□□□ -1.04
SOX2-OT-207ENST00000476964 USP20Q9Y2K6 914 aa8.57□□□□□ -1.04
SOX2-OT-207ENST00000476964 MAP3K6O95382 1288 aa8.56□□□□□ -1.04
SOX2-OT-207ENST00000476964 RGL4Q8IZJ4 473 aa8.56□□□□□ -1.04
SOX2-OT-207ENST00000476964 BHMTQ93088 406 aa8.56□□□□□ -1.04
SOX2-OT-207ENST00000476964 FAM13BQ9NYF5 915 aa8.56□□□□□ -1.04
SOX2-OT-207ENST00000476964 ZFATQ9P243 1243 aa8.56□□□□□ -1.04
SOX2-OT-207ENST00000476964 GTF3C5Q9Y5Q8 519 aaPredicted RBP8.56□□□□□ -1.04
SOX2-OT-207ENST00000476964 TARSP26639 723 aaKnown RBP8.55□□□□□ -1.04
SOX2-OT-207ENST00000476964 FKBP4Q02790 459 aaKnown RBP eCLIP8.55□□□□□ -1.04
SOX2-OT-207ENST00000476964 SF3B2Q13435 895 aaKnown RBP8.55□□□□□ -1.04
SOX2-OT-207ENST00000476964 NEDD1Q8NHV4 660 aa8.55□□□□□ -1.04
SOX2-OT-207ENST00000476964 EGFL7Q9UHF1 273 aa8.55□□□□□ -1.04
SOX2-OT-207ENST00000476964 XYLBO75191 536 aa8.54□□□□□ -1.04
SOX2-OT-207ENST00000476964 ECM1Q16610 540 aa8.54□□□□□ -1.04
SOX2-OT-207ENST00000476964 NOM1Q5C9Z4 860 aaKnown RBP8.54□□□□□ -1.04
SOX2-OT-207ENST00000476964 CMTR1Q8N1G2 835 aaKnown RBP8.54□□□□□ -1.04
SOX2-OT-207ENST00000476964 PIK3R5Q8WYR1 880 aa8.54□□□□□ -1.04
SOX2-OT-207ENST00000476964 SASH3O75995 380 aa8.53□□□□□ -1.04
SOX2-OT-207ENST00000476964 BRD1O95696 1058 aa8.53□□□□□ -1.04
SOX2-OT-207ENST00000476964 MPSTP25325 297 aa8.53□□□□□ -1.04
SOX2-OT-207ENST00000476964 EIF1AXP47813 144 aaKnown RBP8.53□□□□□ -1.04
SOX2-OT-207ENST00000476964 GSK3AP49840 483 aa8.53□□□□□ -1.04
SOX2-OT-207ENST00000476964 SNRPNP63162 240 aaKnown RBP8.53□□□□□ -1.04
SOX2-OT-207ENST00000476964 MTMR3Q13615 1198 aa8.53□□□□□ -1.04
SOX2-OT-207ENST00000476964 TRIP4Q15650 581 aaPredicted RBP8.53□□□□□ -1.04
SOX2-OT-207ENST00000476964 LINC00114Q6XXX2 140 aa8.53□□□□□ -1.04
SOX2-OT-207ENST00000476964 ICMTO60725 284 aa8.52□□□□□ -1.05
SOX2-OT-207ENST00000476964 FAM13AO94988 1023 aa8.52□□□□□ -1.05
SOX2-OT-207ENST00000476964 NFKB1P19838 968 aa8.52□□□□□ -1.05
SOX2-OT-207ENST00000476964 ALAS2P22557 587 aa8.52□□□□□ -1.05
SOX2-OT-207ENST00000476964 MARSP56192 900 aaKnown RBP8.52□□□□□ -1.05
SOX2-OT-207ENST00000476964 CHSY3Q70JA7 882 aa8.52□□□□□ -1.05
SOX2-OT-207ENST00000476964 ATCAYQ86WG3 371 aa8.52□□□□□ -1.05
SOX2-OT-207ENST00000476964 BEND7Q8N7W2 519 aaPredicted RBP8.52□□□□□ -1.05
SOX2-OT-207ENST00000476964 GPR152Q8TDT2 470 aa8.52□□□□□ -1.05
SOX2-OT-207ENST00000476964 SCARF2Q96GP6 870 aaPredicted RBP8.52□□□□□ -1.05
SOX2-OT-207ENST00000476964 PNMA5Q96PV4 448 aa8.52□□□□□ -1.05
SOX2-OT-207ENST00000476964 STARD13Q9Y3M8 1113 aa8.52□□□□□ -1.05
SOX2-OT-207ENST00000476964 ZBTB42B2RXF5 422 aa8.51□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 15.8 ms