RNA–Protein interactions for RNA: ENST00000476379.5

CCDC39-204, Transcript of coiled-coil domain containing 39, humanhuman

TSL 2

Gene CCDC39, Length 4,451 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC39-204ENST00000476379 FAM227BQ96M60 508 aa5.93□□□□□ -1.46
CCDC39-204ENST00000476379 TNMDQ9H2S6 317 aa5.93□□□□□ -1.46
CCDC39-204ENST00000476379 CD163L1Q9NR16 1453 aa5.93□□□□□ -1.46
CCDC39-204ENST00000476379 DIP2AQ14689 1571 aa5.93□□□□□ -1.46
CCDC39-204ENST00000476379 NEXNQ0ZGT2 675 aa5.93□□□□□ -1.46
CCDC39-204ENST00000476379 PROSER3Q2NL68 480 aa5.93□□□□□ -1.46
CCDC39-204ENST00000476379 UBE3BQ7Z3V4 1068 aa5.93□□□□□ -1.46
CCDC39-204ENST00000476379 IP6K1Q92551 441 aa5.93□□□□□ -1.46
CCDC39-204ENST00000476379 CYP46A1Q9Y6A2 500 aa5.93□□□□□ -1.46
CCDC39-204ENST00000476379 INSRP06213 1382 aa5.93□□□□□ -1.46
CCDC39-204ENST00000476379 NRXN3Q9Y4C0 1643 aa5.93□□□□□ -1.46
CCDC39-204ENST00000476379 GNAT3A8MTJ3 354 aa5.93□□□□□ -1.46
CCDC39-204ENST00000476379 EXOC5O00471 708 aa5.93□□□□□ -1.46
CCDC39-204ENST00000476379 POTEAQ6S8J7 498 aa5.93□□□□□ -1.46
CCDC39-204ENST00000476379 RPAP2Q8IXW5 612 aaPredicted RBP5.93□□□□□ -1.46
CCDC39-204ENST00000476379 SPATA32Q96LK8 384 aa5.93□□□□□ -1.46
CCDC39-204ENST00000476379 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP5.93□□□□□ -1.46
CCDC39-204ENST00000476379 POLR3AO14802 1390 aaPredicted RBP5.93□□□□□ -1.46
CCDC39-204ENST00000476379 ERBB3P21860 1342 aa5.92□□□□□ -1.46
CCDC39-204ENST00000476379 RASSF8Q8NHQ8 419 aa5.92□□□□□ -1.46
CCDC39-204ENST00000476379 ESYT1Q9BSJ8 1104 aa5.92□□□□□ -1.46
CCDC39-204ENST00000476379 PDGFDQ9GZP0 370 aaPredicted RBP5.92□□□□□ -1.46
CCDC39-204ENST00000476379 CCDC39Q9UFE4 941 aa5.92□□□□□ -1.46
CCDC39-204ENST00000476379 NEURL4Q96JN8 1562 aa5.92□□□□□ -1.46
CCDC39-204ENST00000476379 ARHGAP23Q9P227 1491 aa5.92□□□□□ -1.46
CCDC39-204ENST00000476379 ALDH1L2Q3SY69 923 aa5.92□□□□□ -1.46
CCDC39-204ENST00000476379 SLC51AQ86UW1 340 aa5.92□□□□□ -1.46
CCDC39-204ENST00000476379 ANKRD44Q8N8A2 993 aa5.92□□□□□ -1.46
CCDC39-204ENST00000476379 UBE2Q2Q8WVN8 375 aa5.92□□□□□ -1.46
CCDC39-204ENST00000476379 DCTPP1Q9H773 170 aa5.92□□□□□ -1.46
CCDC39-204ENST00000476379 BLOC1S2Q6QNY1 142 aa5.92□□□□□ -1.46
CCDC39-204ENST00000476379 NFXL1Q6ZNB6 911 aa5.92□□□□□ -1.46
CCDC39-204ENST00000476379 SEPT12Q8IYM1 358 aa5.92□□□□□ -1.46
CCDC39-204ENST00000476379 KCNH5Q8NCM2 988 aa5.92□□□□□ -1.46
CCDC39-204ENST00000476379 RHPN1Q8TCX5 695 aa5.92□□□□□ -1.46
CCDC39-204ENST00000476379 PLEKHF1Q96S99 279 aa5.92□□□□□ -1.46
CCDC39-204ENST00000476379 SEC62Q99442 399 aaKnown RBP5.92□□□□□ -1.46
CCDC39-204ENST00000476379 FTOQ9C0B1 505 aaKnown RBP eCLIP5.92□□□□□ -1.46
CCDC39-204ENST00000476379 DNAJC25Q9H1X3 360 aa5.92□□□□□ -1.46
CCDC39-204ENST00000476379 NCOA5Q9HCD5 579 aaKnown RBP5.92□□□□□ -1.46
CCDC39-204ENST00000476379 LMBRD1Q9NUN5 540 aa5.92□□□□□ -1.46
CCDC39-204ENST00000476379 USP16Q9Y5T5 823 aa5.92□□□□□ -1.46
CCDC39-204ENST00000476379 STX6O43752 255 aa5.91□□□□□ -1.46
CCDC39-204ENST00000476379 PTGS1P23219 599 aa5.91□□□□□ -1.46
CCDC39-204ENST00000476379 PPP4R3BQ5MIZ7 849 aa5.91□□□□□ -1.46
CCDC39-204ENST00000476379 RASEFQ8IZ41 740 aa5.91□□□□□ -1.46
CCDC39-204ENST00000476379 SYNE4Q8N205 404 aa5.91□□□□□ -1.46
CCDC39-204ENST00000476379 ZCRB1Q8TBF4 217 aaKnown RBP5.91□□□□□ -1.46
CCDC39-204ENST00000476379 RNF216Q9NWF9 866 aaPredicted RBP5.91□□□□□ -1.46
CCDC39-204ENST00000476379 GOLIM4O00461 696 aa5.91□□□□□ -1.46
CCDC39-204ENST00000476379 CCT4P50991 539 aaKnown RBP5.91□□□□□ -1.46
CCDC39-204ENST00000476379 LRMPQ12912 555 aa5.91□□□□□ -1.46
CCDC39-204ENST00000476379 IL25Q9H293 177 aa5.91□□□□□ -1.46
CCDC39-204ENST00000476379 DACT1Q9NYF0 836 aa5.91□□□□□ -1.46
CCDC39-204ENST00000476379 ADCK5Q3MIX3 580 aa5.91□□□□□ -1.46
CCDC39-204ENST00000476379 NCBP3Q53F19 620 aaKnown RBP5.91□□□□□ -1.46
CCDC39-204ENST00000476379 BRF1Q92994 677 aa5.91□□□□□ -1.46
CCDC39-204ENST00000476379 ZNF496Q96IT1 587 aaPredicted RBP5.91□□□□□ -1.46
CCDC39-204ENST00000476379 WDR33Q9C0J8 1336 aaKnown RBP5.91□□□□□ -1.46
CCDC39-204ENST00000476379 JAK2O60674 1132 aa5.91□□□□□ -1.46
CCDC39-204ENST00000476379 LARGE1O95461 756 aa5.91□□□□□ -1.46
CCDC39-204ENST00000476379 SYT1P21579 422 aa5.91□□□□□ -1.46
CCDC39-204ENST00000476379 CCDC186Q7Z3E2 898 aa5.91□□□□□ -1.46
CCDC39-204ENST00000476379 JAG2Q9Y219 1238 aa5.91□□□□□ -1.46
CCDC39-204ENST00000476379 EDC4Q6P2E9 1401 aaKnown RBP5.9□□□□□ -1.46
CCDC39-204ENST00000476379 MBD3O95983 291 aa5.9□□□□□ -1.46
CCDC39-204ENST00000476379 IL2RBP14784 551 aa5.9□□□□□ -1.46
CCDC39-204ENST00000476379 CHMLP26374 656 aa5.9□□□□□ -1.46
CCDC39-204ENST00000476379 NAA30Q147X3 362 aaPredicted RBP5.9□□□□□ -1.46
CCDC39-204ENST00000476379 RUFY2Q8WXA3 655 aa5.9□□□□□ -1.46
CCDC39-204ENST00000476379 DNAAF4Q8WXU2 420 aa5.9□□□□□ -1.46
CCDC39-204ENST00000476379 NUP62CLQ9H1M0 184 aa5.9□□□□□ -1.46
CCDC39-204ENST00000476379 TECPR2O15040 1411 aa5.9□□□□□ -1.46
CCDC39-204ENST00000476379 NRXN1Q9ULB1 1477 aa5.9□□□□□ -1.46
CCDC39-204ENST00000476379 PTH1RQ03431 593 aa5.9□□□□□ -1.46
CCDC39-204ENST00000476379 KLHL10Q6JEL2 608 aa5.9□□□□□ -1.46
CCDC39-204ENST00000476379 CIZ1Q9ULV3 898 aaPredicted RBP5.9□□□□□ -1.46
CCDC39-204ENST00000476379 ZSCAN21Q9Y5A6 473 aaPredicted RBP5.9□□□□□ -1.46
CCDC39-204ENST00000476379 SLIT1O75093 1534 aa5.9□□□□□ -1.47
CCDC39-204ENST00000476379 GOLGA6L6A8MZA4 724 aa5.9□□□□□ -1.47
CCDC39-204ENST00000476379 IDH1O75874 414 aaKnown RBP5.9□□□□□ -1.47
CCDC39-204ENST00000476379 EN1Q05925 392 aaPredicted RBP5.9□□□□□ -1.47
CCDC39-204ENST00000476379 DNAJC10Q8IXB1 793 aa5.9□□□□□ -1.47
CCDC39-204ENST00000476379 HELBQ8NG08 1087 aaPredicted RBP5.9□□□□□ -1.47
CCDC39-204ENST00000476379 NUP133Q8WUM0 1156 aa5.9□□□□□ -1.47
CCDC39-204ENST00000476379 CPLX3Q8WVH0 158 aa5.9□□□□□ -1.47
CCDC39-204ENST00000476379 TLR7Q9NYK1 1049 aaKnown RBP5.9□□□□□ -1.47
CCDC39-204ENST00000476379 FLT4P35916 1363 aa5.9□□□□□ -1.47
CCDC39-204ENST00000476379 MARCKSP29966 332 aaPredicted RBP5.89□□□□□ -1.47
CCDC39-204ENST00000476379 RBM25P49756 843 aaKnown RBP5.89□□□□□ -1.47
CCDC39-204ENST00000476379 TIMM10P62072 90 aa5.89□□□□□ -1.47
CCDC39-204ENST00000476379 ANO6Q4KMQ2 910 aa5.89□□□□□ -1.47
CCDC39-204ENST00000476379 PLEKHO1Q53GL0 409 aaPredicted RBP5.89□□□□□ -1.47
CCDC39-204ENST00000476379 SPECC1Q5M775 1068 aa5.89□□□□□ -1.47
CCDC39-204ENST00000476379 LRSAM1Q6UWE0 723 aa5.89□□□□□ -1.47
CCDC39-204ENST00000476379 CCDC73Q6ZRK6 1079 aa5.89□□□□□ -1.47
CCDC39-204ENST00000476379 ZNF594Q96JF6 807 aaPredicted RBP5.89□□□□□ -1.47
CCDC39-204ENST00000476379 ATP6V1DQ9Y5K8 247 aa5.89□□□□□ -1.47
CCDC39-204ENST00000476379 RBM8AQ9Y5S9 174 aaKnown RBP5.89□□□□□ -1.47
CCDC39-204ENST00000476379 SOS1Q07889 1333 aaPredicted RBP5.89□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 51.8 ms