RNA–Protein interactions for RNA: ENST00000476342.1

HOXB3-208, Transcript of homeobox B3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HOXB3, Length 1,420 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXB3-208ENST00000476342 NUTM1Q86Y26 1132 aa37.61■■■■□ 3.61
HOXB3-208ENST00000476342 CCDC191Q8NCU4 936 aa37.61■■■■□ 3.61
HOXB3-208ENST00000476342 TRMT112Q9UI30 125 aaKnown RBP37.61■■■■□ 3.61
HOXB3-208ENST00000476342 N4BP2Q86UW6 1770 aaPredicted RBP37.61■■■■□ 3.61
HOXB3-208ENST00000476342 PDE6BP35913 854 aa37.61■■■■□ 3.61
HOXB3-208ENST00000476342 KIF16BQ96L93 1317 aa37.6■■■■□ 3.61
HOXB3-208ENST00000476342 PDZRN3Q9UPQ7 1066 aa37.6■■■■□ 3.61
HOXB3-208ENST00000476342 F6X3S4 739 aa37.59■■■■□ 3.61
HOXB3-208ENST00000476342 CWC25Q9NXE8 425 aaPredicted RBP37.59■■■■□ 3.61
HOXB3-208ENST00000476342 ERFEQ4G0M1 354 aa37.58■■■■□ 3.61
HOXB3-208ENST00000476342 SH3TC1Q8TE82 1336 aa37.57■■■■□ 3.61
HOXB3-208ENST00000476342 ABCC12Q96J65 1359 aa37.57■■■■□ 3.6
HOXB3-208ENST00000476342 RIC1Q4ADV7 1423 aa37.56■■■■□ 3.6
HOXB3-208ENST00000476342 IGKV5-2P06315 115 aa37.56■■■■□ 3.6
HOXB3-208ENST00000476342 LINS1Q8NG48 757 aa37.55■■■■□ 3.6
HOXB3-208ENST00000476342 A0A0G2JLW4 131 aa37.54■■■■□ 3.6
HOXB3-208ENST00000476342 DPEP1P16444 411 aa37.54■■■■□ 3.6
HOXB3-208ENST00000476342 NOB1Q9ULX3 412 aaKnown RBP37.54■■■■□ 3.6
HOXB3-208ENST00000476342 NEURL1BA8MQ27 555 aa37.53■■■■□ 3.6
HOXB3-208ENST00000476342 H0YIN7 160 aa37.53■■■■□ 3.6
HOXB3-208ENST00000476342 CWF19L2Q2TBE0 894 aaKnown RBP37.53■■■■□ 3.6
HOXB3-208ENST00000476342 SLC4A10Q6U841 1118 aa37.53■■■■□ 3.6
HOXB3-208ENST00000476342 DLEC1Q9Y238 1755 aa37.53■■■■□ 3.6
HOXB3-208ENST00000476342 C2CD5Q86YS7 1000 aa37.53■■■■□ 3.6
HOXB3-208ENST00000476342 ZBTB38Q8NAP3 1195 aaPredicted RBP37.53■■■■□ 3.6
HOXB3-208ENST00000476342 BCAR3O75815 825 aa37.52■■■■□ 3.6
HOXB3-208ENST00000476342 CHRNA5P30532 468 aa37.52■■■■□ 3.6
HOXB3-208ENST00000476342 BEND3Q5T5X7 828 aa37.51■■■■□ 3.59
HOXB3-208ENST00000476342 FAM89AQ96GI7 184 aa37.51■■■■□ 3.59
HOXB3-208ENST00000476342 API5Q9BZZ5 524 aaKnown RBP37.51■■■■□ 3.59
HOXB3-208ENST00000476342 TNRC6CQ9HCJ0 1690 aaKnown RBP37.51■■■■□ 3.59
HOXB3-208ENST00000476342 COL11A2P13942 1736 aaPredicted RBP37.5■■■■□ 3.59
HOXB3-208ENST00000476342 BRCA1P38398 1863 aaKnown RBP37.5■■■■□ 3.59
HOXB3-208ENST00000476342 SLC10A5Q5PT55 438 aa37.5■■■■□ 3.59
HOXB3-208ENST00000476342 IPO8O15397 1037 aaKnown RBP37.49■■■■□ 3.59
HOXB3-208ENST00000476342 PCCAP05165 728 aaPredicted RBP37.49■■■■□ 3.59
HOXB3-208ENST00000476342 ARHGAP45Q92619 1136 aa37.49■■■■□ 3.59
HOXB3-208ENST00000476342 KLRG2A4D1S0 409 aaPredicted RBP37.48■■■■□ 3.59
HOXB3-208ENST00000476342 HSP90B1P14625 803 aaKnown RBP37.47■■■■□ 3.59
HOXB3-208ENST00000476342 KCNA3P22001 575 aa37.47■■■■□ 3.59
HOXB3-208ENST00000476342 NLRP3Q96P20 1036 aa37.47■■■■□ 3.59
HOXB3-208ENST00000476342 SRCIN1Q9C0H9 1055 aa37.47■■■■□ 3.59
HOXB3-208ENST00000476342 PIM2Q9P1W9 311 aa37.47■■■■□ 3.59
HOXB3-208ENST00000476342 LAMB2P55268 1798 aa37.47■■■■□ 3.59
HOXB3-208ENST00000476342 DCAF8L1A6NGE4 600 aa37.46■■■■□ 3.59
HOXB3-208ENST00000476342 GCKRQ14397 625 aa37.46■■■■□ 3.59
HOXB3-208ENST00000476342 RTL5Q5HYW3 569 aaPredicted RBP37.46■■■■□ 3.59
HOXB3-208ENST00000476342 SYNE4Q8N205 404 aa37.46■■■■□ 3.59
HOXB3-208ENST00000476342 DDX60Q8IY21 1712 aaKnown RBP37.46■■■■□ 3.59
HOXB3-208ENST00000476342 ALDH1L1O75891 902 aa37.45■■■■□ 3.59
HOXB3-208ENST00000476342 SRGNP10124 158 aa37.45■■■■□ 3.59
HOXB3-208ENST00000476342 FRAT1Q92837 279 aaPredicted RBP37.45■■■■□ 3.59
HOXB3-208ENST00000476342 GOLGB1Q14789 3259 aaKnown RBP37.45■■■■□ 3.58
HOXB3-208ENST00000476342 HCLS1P14317 486 aaPredicted RBP37.44■■■■□ 3.58
HOXB3-208ENST00000476342 MASTLQ96GX5 879 aa37.44■■■■□ 3.58
HOXB3-208ENST00000476342 IRS4O14654 1257 aaPredicted RBP37.44■■■■□ 3.58
HOXB3-208ENST00000476342 PELP1Q8IZL8 1130 aaKnown RBP37.44■■■■□ 3.58
HOXB3-208ENST00000476342 CRY2Q49AN0 593 aa37.43■■■■□ 3.58
HOXB3-208ENST00000476342 ZNF622Q969S3 477 aaKnown RBP eCLIP37.43■■■■□ 3.58
HOXB3-208ENST00000476342 WWC3Q9ULE0 1092 aa37.43■■■■□ 3.58
HOXB3-208ENST00000476342 CDHR2Q9BYE9 1310 aa37.43■■■■□ 3.58
HOXB3-208ENST00000476342 NPR1P16066 1061 aa37.42■■■■□ 3.58
HOXB3-208ENST00000476342 STYK1Q6J9G0 422 aa37.42■■■■□ 3.58
HOXB3-208ENST00000476342 RCAN3Q9UKA8 241 aa37.42■■■■□ 3.58
HOXB3-208ENST00000476342 GPR162Q16538 588 aa37.41■■■■□ 3.58
HOXB3-208ENST00000476342 ZKSCAN2Q63HK3 967 aa37.4■■■■□ 3.58
HOXB3-208ENST00000476342 ATF7IPQ6VMQ6 1270 aa37.4■■■■□ 3.58
HOXB3-208ENST00000476342 RPGRQ92834 1020 aaKnown RBP37.4■■■■□ 3.58
HOXB3-208ENST00000476342 H7C1W4 665 aa37.39■■■■□ 3.58
HOXB3-208ENST00000476342 DALRD3Q5D0E6 543 aaKnown RBP37.39■■■■□ 3.58
HOXB3-208ENST00000476342 UBE3BQ7Z3V4 1068 aa37.39■■■■□ 3.58
HOXB3-208ENST00000476342 TTLL6Q8N841 843 aa37.39■■■■□ 3.58
HOXB3-208ENST00000476342 CNKSR1Q969H4 720 aa37.39■■■■□ 3.58
HOXB3-208ENST00000476342 JARID2Q92833 1246 aaPredicted RBP37.38■■■■□ 3.57
HOXB3-208ENST00000476342 BCS1LQ9Y276 419 aa37.38■■■■□ 3.57
HOXB3-208ENST00000476342 CCT4P50991 539 aaKnown RBP37.37■■■■□ 3.57
HOXB3-208ENST00000476342 C3orf67Q6ZVT6 689 aa37.37■■■■□ 3.57
HOXB3-208ENST00000476342 TRIM27P14373 513 aa37.36■■■■□ 3.57
HOXB3-208ENST00000476342 C9orf78Q9NZ63 289 aaPredicted RBP37.36■■■■□ 3.57
HOXB3-208ENST00000476342 CACNA1SQ13698 1873 aa37.36■■■■□ 3.57
HOXB3-208ENST00000476342 ARFGEF1Q9Y6D6 1849 aa37.36■■■■□ 3.57
HOXB3-208ENST00000476342 PDE8AO60658 829 aa37.36■■■■□ 3.57
HOXB3-208ENST00000476342 MYH3P11055 1940 aa37.35■■■■□ 3.57
HOXB3-208ENST00000476342 GRM8O00222 908 aa37.35■■■■□ 3.57
HOXB3-208ENST00000476342 ALDH1B1P30837 517 aa37.35■■■■□ 3.57
HOXB3-208ENST00000476342 RBM17Q96I25 401 aaKnown RBP37.35■■■■□ 3.57
HOXB3-208ENST00000476342 ABCC4O15439 1325 aa37.34■■■■□ 3.57
HOXB3-208ENST00000476342 YBX3P16989 372 aaKnown RBP eCLIP37.34■■■■□ 3.57
HOXB3-208ENST00000476342 HOXA10P31260 410 aaPredicted RBP37.33■■■■□ 3.57
HOXB3-208ENST00000476342 CASP7P55210 303 aa37.32■■■■□ 3.56
HOXB3-208ENST00000476342 SF3B3Q15393 1217 aaKnown RBP37.32■■■■□ 3.56
HOXB3-208ENST00000476342 GRIN3BO60391 1043 aa37.3■■■■□ 3.56
HOXB3-208ENST00000476342 UTRNP46939 3433 aa37.3■■■■□ 3.56
HOXB3-208ENST00000476342 PRPF40BQ6NWY9 871 aaKnown RBP37.29■■■■□ 3.56
HOXB3-208ENST00000476342 DDX46Q7L014 1031 aaKnown RBP37.29■■■■□ 3.56
HOXB3-208ENST00000476342 CRAMP1Q96RY5 1269 aa37.29■■■■□ 3.56
HOXB3-208ENST00000476342 PLA2G12BQ9BX93 195 aa37.29■■■■□ 3.56
HOXB3-208ENST00000476342 CCDC152Q4G0S7 254 aa37.28■■■■□ 3.56
HOXB3-208ENST00000476342 FTSJ3Q8IY81 847 aaKnown RBP37.28■■■■□ 3.56
HOXB3-208ENST00000476342 CLUAP1Q96AJ1 413 aa37.28■■■■□ 3.56
Retrieved 100 of 20,778 RNA–protein pairs in 12 ms