RNA–Protein interactions for RNA: ENST00000476061.5

PTPN7-208, Transcript of protein tyrosine phosphatase, non-receptor type 7, humanhuman

TSL 4

Gene PTPN7, Length 550 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN7-208ENST00000476061 EIF2S2P20042 333 aaKnown RBP12.97□□□□□ -0.33
PTPN7-208ENST00000476061 GPTP24298 496 aa12.97□□□□□ -0.33
PTPN7-208ENST00000476061 HSP90AB3PQ58FF7 597 aa12.97□□□□□ -0.33
PTPN7-208ENST00000476061 SLC10A5Q5PT55 438 aa12.97□□□□□ -0.33
PTPN7-208ENST00000476061 RPGRQ92834 1020 aaKnown RBP12.97□□□□□ -0.33
PTPN7-208ENST00000476061 TRIM35Q9UPQ4 493 aa12.97□□□□□ -0.33
PTPN7-208ENST00000476061 FZD9O00144 591 aa12.96□□□□□ -0.33
PTPN7-208ENST00000476061 HOXB7P09629 217 aa12.96□□□□□ -0.33
PTPN7-208ENST00000476061 IARSP41252 1262 aaKnown RBP12.96□□□□□ -0.33
PTPN7-208ENST00000476061 RBM17Q96I25 401 aaKnown RBP12.96□□□□□ -0.33
PTPN7-208ENST00000476061 PRKRIP1Q9H875 184 aaPredicted RBP12.96□□□□□ -0.33
PTPN7-208ENST00000476061 DDX21Q9NR30 783 aaKnown RBP eCLIP12.96□□□□□ -0.33
PTPN7-208ENST00000476061 ADAMTSL1Q8N6G6 1762 aa12.96□□□□□ -0.34
PTPN7-208ENST00000476061 CEP350Q5VT06 3117 aa12.95□□□□□ -0.34
PTPN7-208ENST00000476061 HTRA3P83110 453 aa12.95□□□□□ -0.34
PTPN7-208ENST00000476061 CHADLQ6NUI6 762 aa12.95□□□□□ -0.34
PTPN7-208ENST00000476061 CCDC146Q8IYE0 955 aa12.95□□□□□ -0.34
PTPN7-208ENST00000476061 SYNE4Q8N205 404 aa12.95□□□□□ -0.34
PTPN7-208ENST00000476061 NLRP3Q96P20 1036 aa12.95□□□□□ -0.34
PTPN7-208ENST00000476061 UTP14AQ9BVJ6 771 aaKnown RBP12.95□□□□□ -0.34
PTPN7-208ENST00000476061 ZNF277Q9NRM2 450 aaPredicted RBP12.95□□□□□ -0.34
PTPN7-208ENST00000476061 ADAMTS8Q9UP79 889 aa12.95□□□□□ -0.34
PTPN7-208ENST00000476061 NEUROD2Q15784 382 aa12.94□□□□□ -0.34
PTPN7-208ENST00000476061 PROSER3Q2NL68 480 aa12.94□□□□□ -0.34
PTPN7-208ENST00000476061 OLFM4Q6UX06 510 aa12.94□□□□□ -0.34
PTPN7-208ENST00000476061 COPS6Q7L5N1 327 aa12.94□□□□□ -0.34
PTPN7-208ENST00000476061 CFAP44Q96MT7 982 aa12.94□□□□□ -0.34
PTPN7-208ENST00000476061 TCIRG1Q13488 830 aa12.93□□□□□ -0.34
PTPN7-208ENST00000476061 LDHDQ86WU2 507 aa12.93□□□□□ -0.34
PTPN7-208ENST00000476061 GPC2Q8N158 579 aa12.93□□□□□ -0.34
PTPN7-208ENST00000476061 JDP2Q8WYK2 163 aa12.93□□□□□ -0.34
PTPN7-208ENST00000476061 VPS33BQ9H267 617 aa12.93□□□□□ -0.34
PTPN7-208ENST00000476061 TAF1DQ9H5J8 278 aaPredicted RBP12.93□□□□□ -0.34
PTPN7-208ENST00000476061 DDX60Q8IY21 1712 aaKnown RBP12.93□□□□□ -0.34
PTPN7-208ENST00000476061 ZNF541Q9H0D2 1346 aa12.92□□□□□ -0.34
PTPN7-208ENST00000476061 PPEF1O14829 653 aaPredicted RBP12.92□□□□□ -0.34
PTPN7-208ENST00000476061 ANXA1P04083 346 aa12.92□□□□□ -0.34
PTPN7-208ENST00000476061 PNMA8AQ86V59 439 aaPredicted RBP12.92□□□□□ -0.34
PTPN7-208ENST00000476061 NLRP10Q86W26 655 aa12.92□□□□□ -0.34
PTPN7-208ENST00000476061 XAGE3Q8WTP9 111 aa12.92□□□□□ -0.34
PTPN7-208ENST00000476061 DBF4Q9UBU7 674 aaPredicted RBP12.92□□□□□ -0.34
PTPN7-208ENST00000476061 HACL1Q9UJ83 578 aa12.92□□□□□ -0.34
PTPN7-208ENST00000476061 AIMP1Q12904 312 aaKnown RBP12.91□□□□□ -0.34
PTPN7-208ENST00000476061 KRT24Q2M2I5 525 aa12.91□□□□□ -0.34
PTPN7-208ENST00000476061 HDGFL1Q5TGJ6 251 aa12.91□□□□□ -0.34
PTPN7-208ENST00000476061 C3orf67Q6ZVT6 689 aa12.91□□□□□ -0.34
PTPN7-208ENST00000476061 PLBD2Q8NHP8 589 aa12.91□□□□□ -0.34
PTPN7-208ENST00000476061 TMX4Q9H1E5 349 aaPredicted RBP12.91□□□□□ -0.34
PTPN7-208ENST00000476061 CREBZFQ9NS37 354 aa12.91□□□□□ -0.34
PTPN7-208ENST00000476061 ATP6V0A2Q9Y487 856 aa12.91□□□□□ -0.34
PTPN7-208ENST00000476061 LAS1LQ9Y4W2 734 aaKnown RBP12.91□□□□□ -0.34
PTPN7-208ENST00000476061 LRRC37AA6NMS7 1700 aa12.91□□□□□ -0.34
PTPN7-208ENST00000476061 SH3TC1Q8TE82 1336 aa12.9□□□□□ -0.34
PTPN7-208ENST00000476061 PASKQ96RG2 1323 aa12.9□□□□□ -0.34
PTPN7-208ENST00000476061 COL4A5P29400 1685 aa12.9□□□□□ -0.34
PTPN7-208ENST00000476061 BBOX1O75936 387 aa12.9□□□□□ -0.34
PTPN7-208ENST00000476061 ZNF853P0CG23 659 aa12.9□□□□□ -0.34
PTPN7-208ENST00000476061 POTEIP0CG38 1075 aa12.9□□□□□ -0.34
PTPN7-208ENST00000476061 POTEJP0CG39 1038 aa12.9□□□□□ -0.34
PTPN7-208ENST00000476061 EPHX2P34913 555 aa12.9□□□□□ -0.34
PTPN7-208ENST00000476061 EIF6P56537 245 aaKnown RBP12.9□□□□□ -0.34
PTPN7-208ENST00000476061 CALD1Q05682 793 aaKnown RBP12.9□□□□□ -0.34
PTPN7-208ENST00000476061 NECTIN2Q92692 538 aa12.9□□□□□ -0.34
PTPN7-208ENST00000476061 HYPKQ9NX55 129 aa12.9□□□□□ -0.34
PTPN7-208ENST00000476061 CHPF2Q9P2E5 772 aa12.9□□□□□ -0.34
PTPN7-208ENST00000476061 ABCC4O15439 1325 aa12.89□□□□□ -0.35
PTPN7-208ENST00000476061 TAF1P21675 1872 aa12.89□□□□□ -0.35
PTPN7-208ENST00000476061 LTBP1Q14766 1721 aa12.89□□□□□ -0.35
PTPN7-208ENST00000476061 ANKRD13DQ6ZTN6 518 aa12.89□□□□□ -0.35
PTPN7-208ENST00000476061 SP8Q8IXZ3 490 aa12.89□□□□□ -0.35
PTPN7-208ENST00000476061 SUPT20HQ8NEM7 779 aa12.89□□□□□ -0.35
PTPN7-208ENST00000476061 RTFDC1Q9BY42 306 aaPredicted RBP12.89□□□□□ -0.35
PTPN7-208ENST00000476061 TRMT112Q9UI30 125 aaKnown RBP12.89□□□□□ -0.35
PTPN7-208ENST00000476061 ITGBL1O95965 494 aaPredicted RBP12.88□□□□□ -0.35
PTPN7-208ENST00000476061 GNAI1P63096 354 aa12.88□□□□□ -0.35
PTPN7-208ENST00000476061 DUSP27Q5VZP5 1158 aa12.88□□□□□ -0.35
PTPN7-208ENST00000476061 TMC4Q7Z404 712 aa12.88□□□□□ -0.35
PTPN7-208ENST00000476061 LARGE2Q8N3Y3 721 aa12.88□□□□□ -0.35
PTPN7-208ENST00000476061 ISCA1Q9BUE6 129 aa12.88□□□□□ -0.35
PTPN7-208ENST00000476061 MBIPQ9NS73 344 aa12.88□□□□□ -0.35
PTPN7-208ENST00000476061 IFT57Q9NWB7 429 aa12.88□□□□□ -0.35
PTPN7-208ENST00000476061 APAF1O14727 1248 aa12.87□□□□□ -0.35
PTPN7-208ENST00000476061 TRIM28Q13263 835 aaKnown RBP12.87□□□□□ -0.35
PTPN7-208ENST00000476061 DDX46Q7L014 1031 aaKnown RBP12.87□□□□□ -0.35
PTPN7-208ENST00000476061 CHMP4AQ9BY43 222 aa12.87□□□□□ -0.35
PTPN7-208ENST00000476061 HCLS1P14317 486 aaPredicted RBP12.86□□□□□ -0.35
PTPN7-208ENST00000476061 LMOD1P29536 600 aaPredicted RBP12.86□□□□□ -0.35
PTPN7-208ENST00000476061 GRAPQ13588 217 aa12.86□□□□□ -0.35
PTPN7-208ENST00000476061 SF3B3Q15393 1217 aaKnown RBP12.86□□□□□ -0.35
PTPN7-208ENST00000476061 EAPPQ56P03 285 aaPredicted RBP12.86□□□□□ -0.35
PTPN7-208ENST00000476061 NIM1KQ8IY84 436 aa12.86□□□□□ -0.35
PTPN7-208ENST00000476061 GRAPLQ8TC17 118 aaPredicted RBP12.86□□□□□ -0.35
PTPN7-208ENST00000476061 TRPM7Q96QT4 1865 aa12.86□□□□□ -0.35
PTPN7-208ENST00000476061 TMEM88BA6NKF7 163 aa12.85□□□□□ -0.35
PTPN7-208ENST00000476061 TCERG1O14776 1098 aaKnown RBP12.85□□□□□ -0.35
PTPN7-208ENST00000476061 PPIP5K2O43314 1243 aa12.85□□□□□ -0.35
PTPN7-208ENST00000476061 SCNN1DP51172 638 aa12.85□□□□□ -0.35
PTPN7-208ENST00000476061 DPP8Q6V1X1 898 aaPredicted RBP12.85□□□□□ -0.35
PTPN7-208ENST00000476061 USP50Q70EL3 339 aaPredicted RBP12.85□□□□□ -0.35
PTPN7-208ENST00000476061 MPNDQ8N594 471 aa12.85□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms