RNA–Protein interactions for RNA: ENST00000475916.1

SLF1-204, Transcript of SMC5-SMC6 complex localization factor 1, humanhuman

TSL 2

Gene SLF1, Length 569 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLF1-204ENST00000475916 SMPD1P17405 629 aa9.26□□□□□ -0.93
SLF1-204ENST00000475916 ORC1Q13415 861 aa9.26□□□□□ -0.93
SLF1-204ENST00000475916 C9orf131Q5VYM1 1079 aa9.26□□□□□ -0.93
SLF1-204ENST00000475916 LYSMD3Q7Z3D4 306 aa9.26□□□□□ -0.93
SLF1-204ENST00000475916 CMTR1Q8N1G2 835 aaKnown RBP9.26□□□□□ -0.93
SLF1-204ENST00000475916 GGNBP2Q9H3C7 697 aa9.26□□□□□ -0.93
SLF1-204ENST00000475916 CCSER2Q9H7U1 834 aa9.26□□□□□ -0.93
SLF1-204ENST00000475916 PDE12Q6L8Q7 609 aaKnown RBP9.25□□□□□ -0.93
SLF1-204ENST00000475916 PRICKLE2Q7Z3G6 844 aa9.25□□□□□ -0.93
SLF1-204ENST00000475916 NT5DC4Q86YG4 428 aa9.25□□□□□ -0.93
SLF1-204ENST00000475916 SNX29Q8TEQ0 813 aa9.25□□□□□ -0.93
SLF1-204ENST00000475916 CRELD1Q96HD1 420 aa9.25□□□□□ -0.93
SLF1-204ENST00000475916 PLA2G2EQ9NZK7 142 aa9.25□□□□□ -0.93
SLF1-204ENST00000475916 BCS1LQ9Y276 419 aa9.25□□□□□ -0.93
SLF1-204ENST00000475916 A0A1B0GTH6 734 aa9.24□□□□□ -0.93
SLF1-204ENST00000475916 UBAP1LF5GYI3 381 aa9.24□□□□□ -0.93
SLF1-204ENST00000475916 POU4F2Q12837 409 aa9.24□□□□□ -0.93
SLF1-204ENST00000475916 SCARF1Q14162 830 aa9.24□□□□□ -0.93
SLF1-204ENST00000475916 UBXN4Q92575 508 aa9.24□□□□□ -0.93
SLF1-204ENST00000475916 TIMMDC1Q9NPL8 285 aa9.24□□□□□ -0.93
SLF1-204ENST00000475916 PHACTR2O75167 634 aa9.23□□□□□ -0.93
SLF1-204ENST00000475916 PRR20EP86478 221 aa9.23□□□□□ -0.93
SLF1-204ENST00000475916 PRR20CP86479 221 aa9.23□□□□□ -0.93
SLF1-204ENST00000475916 PRR20DP86480 221 aa9.23□□□□□ -0.93
SLF1-204ENST00000475916 PRR20BP86481 221 aa9.23□□□□□ -0.93
SLF1-204ENST00000475916 PRR20AP86496 221 aa9.23□□□□□ -0.93
SLF1-204ENST00000475916 XKR5Q6UX68 686 aa9.23□□□□□ -0.93
SLF1-204ENST00000475916 BTLAQ7Z6A9 289 aa9.23□□□□□ -0.93
SLF1-204ENST00000475916 PGBD3Q8N328 593 aa9.23□□□□□ -0.93
SLF1-204ENST00000475916 HPS1Q92902 700 aa9.23□□□□□ -0.93
SLF1-204ENST00000475916 SETDB2Q96T68 719 aa9.23□□□□□ -0.93
SLF1-204ENST00000475916 PPP4R2Q9NY27 417 aa9.23□□□□□ -0.93
SLF1-204ENST00000475916 RTCBQ9Y3I0 505 aaKnown RBP9.23□□□□□ -0.93
SLF1-204ENST00000475916 OPLAHO14841 1288 aa9.22□□□□□ -0.93
SLF1-204ENST00000475916 CTSOP43234 321 aaPredicted RBP9.22□□□□□ -0.93
SLF1-204ENST00000475916 LRRC69Q6ZNQ3 347 aa9.22□□□□□ -0.93
SLF1-204ENST00000475916 ZNF280CQ8ND82 737 aa9.22□□□□□ -0.93
SLF1-204ENST00000475916 PMEPA1Q969W9 287 aa9.22□□□□□ -0.93
SLF1-204ENST00000475916 HSH2DQ96JZ2 352 aa9.22□□□□□ -0.93
SLF1-204ENST00000475916 TGIF2Q9GZN2 237 aa9.22□□□□□ -0.93
SLF1-204ENST00000475916 A6NHS1 94 aa9.21□□□□□ -0.94
SLF1-204ENST00000475916 TNFRSF21O75509 655 aa9.21□□□□□ -0.94
SLF1-204ENST00000475916 INPP5BP32019 993 aa9.21□□□□□ -0.94
SLF1-204ENST00000475916 FANCCQ00597 558 aa9.21□□□□□ -0.94
SLF1-204ENST00000475916 LARP7Q4G0J3 582 aaKnown RBP eCLIP9.21□□□□□ -0.94
SLF1-204ENST00000475916 C6orf118Q5T5N4 469 aa9.21□□□□□ -0.94
SLF1-204ENST00000475916 CCDC74AQ96AQ1 378 aa9.2□□□□□ -0.94
SLF1-204ENST00000475916 CEP63Q96MT8 703 aa9.2□□□□□ -0.94
SLF1-204ENST00000475916 SRCIN1Q9C0H9 1055 aa9.2□□□□□ -0.94
SLF1-204ENST00000475916 ELP3Q9H9T3 547 aa9.2□□□□□ -0.94
SLF1-204ENST00000475916 RNF19AQ9NV58 838 aa9.2□□□□□ -0.94
SLF1-204ENST00000475916 DMGDHQ9UI17 866 aaKnown RBP9.2□□□□□ -0.94
SLF1-204ENST00000475916 MSX1P28360 303 aa9.19□□□□□ -0.94
SLF1-204ENST00000475916 RNF217Q8TC41 542 aa9.19□□□□□ -0.94
SLF1-204ENST00000475916 C7orf43Q8WVR3 580 aa9.19□□□□□ -0.94
SLF1-204ENST00000475916 ZIC5Q96T25 663 aa9.19□□□□□ -0.94
SLF1-204ENST00000475916 C12orf49Q9H741 205 aa9.19□□□□□ -0.94
SLF1-204ENST00000475916 CAPN10Q9HC96 672 aa9.19□□□□□ -0.94
SLF1-204ENST00000475916 ZFYVE28Q9HCC9 887 aa9.19□□□□□ -0.94
SLF1-204ENST00000475916 A0A1W2PNR3 127 aa9.18□□□□□ -0.94
SLF1-204ENST00000475916 TTLL8A6PVC2 850 aa9.18□□□□□ -0.94
SLF1-204ENST00000475916 GADD45BO75293 160 aaPredicted RBP9.18□□□□□ -0.94
SLF1-204ENST00000475916 LDLRAD1Q5T700 205 aa9.18□□□□□ -0.94
SLF1-204ENST00000475916 TTC39BQ5VTQ0 682 aaPredicted RBP9.18□□□□□ -0.94
SLF1-204ENST00000475916 MRPL14Q6P1L8 145 aaKnown RBP9.18□□□□□ -0.94
SLF1-204ENST00000475916 HS2ST1Q7LGA3 356 aa9.18□□□□□ -0.94
SLF1-204ENST00000475916 CFHR5Q9BXR6 569 aa9.18□□□□□ -0.94
SLF1-204ENST00000475916 C11orf16Q9NQ32 467 aa9.18□□□□□ -0.94
SLF1-204ENST00000475916 FAM8A1Q9UBU6 413 aa9.18□□□□□ -0.94
SLF1-204ENST00000475916 XYLBO75191 536 aa9.17□□□□□ -0.94
SLF1-204ENST00000475916 ATP4AP20648 1035 aa9.17□□□□□ -0.94
SLF1-204ENST00000475916 METTL16Q86W50 562 aaKnown RBP9.17□□□□□ -0.94
SLF1-204ENST00000475916 VPS37DQ86XT2 251 aa9.17□□□□□ -0.94
SLF1-204ENST00000475916 TANGO6Q9C0B7 1094 aa9.17□□□□□ -0.94
SLF1-204ENST00000475916 FOXD3Q9UJU5 478 aaPredicted RBP9.17□□□□□ -0.94
SLF1-204ENST00000475916 EPB41L3Q9Y2J2 1087 aaPredicted RBP9.17□□□□□ -0.94
SLF1-204ENST00000475916 RHOQP17081 205 aa9.16□□□□□ -0.94
SLF1-204ENST00000475916 EFHC2Q5JST6 749 aa9.16□□□□□ -0.94
SLF1-204ENST00000475916 ZNF654Q8IZM8 581 aa9.16□□□□□ -0.94
SLF1-204ENST00000475916 USP20Q9Y2K6 914 aa9.16□□□□□ -0.94
SLF1-204ENST00000475916 RAD51AP2Q09MP3 1159 aa9.15□□□□□ -0.94
SLF1-204ENST00000475916 TAF1CQ15572 869 aaPredicted RBP9.15□□□□□ -0.94
SLF1-204ENST00000475916 SLC43A3Q8NBI5 491 aa9.15□□□□□ -0.94
SLF1-204ENST00000475916 ABI2Q9NYB9 513 aaPredicted RBP9.15□□□□□ -0.94
SLF1-204ENST00000475916 HMGB1P09429 215 aaKnown RBP9.14□□□□□ -0.95
SLF1-204ENST00000475916 ATP2B1P20020 1258 aa9.14□□□□□ -0.95
SLF1-204ENST00000475916 NLRP13Q86W25 1043 aa9.14□□□□□ -0.95
SLF1-204ENST00000475916 NLRP8Q86W28 1048 aa9.14□□□□□ -0.95
SLF1-204ENST00000475916 EPS8L3Q8TE67 593 aaKnown RBP9.14□□□□□ -0.95
SLF1-204ENST00000475916 BRD7Q9NPI1 651 aa9.14□□□□□ -0.95
SLF1-204ENST00000475916 GGT7Q9UJ14 662 aa9.14□□□□□ -0.95
SLF1-204ENST00000475916 INPP5FQ9Y2H2 1132 aa9.14□□□□□ -0.95
SLF1-204ENST00000475916 KCNMB2Q9Y691 235 aa9.14□□□□□ -0.95
SLF1-204ENST00000475916 FIGNL2A6NMB9 653 aa9.13□□□□□ -0.95
SLF1-204ENST00000475916 F11P03951 625 aa9.13□□□□□ -0.95
SLF1-204ENST00000475916 CES1P23141 567 aa9.13□□□□□ -0.95
SLF1-204ENST00000475916 TYRO3Q06418 890 aa9.13□□□□□ -0.95
SLF1-204ENST00000475916 USPL1Q5W0Q7 1092 aa9.13□□□□□ -0.95
SLF1-204ENST00000475916 FIGNL1Q6PIW4 674 aa9.13□□□□□ -0.95
SLF1-204ENST00000475916 USP48Q86UV5 1035 aa9.13□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms